FFCP PHASE1:Mm9::chr15:98886326..98886347,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:98886326..98886347,+ | |||
|description=CAGE_peak_at_chr15:98886326..98886347,+ | |description=CAGE_peak_at_chr15:98886326..98886347,+ | ||
|id=chr15:98886326..98886347,+ | |id=chr15:98886326..98886347,+ | ||
|ontology_enrichment_celltype=CL:0000540!4.57e-08!33;CL:0000047!4.57e-08!33;CL:0000031!4.57e-08!33;CL:0000404!4.57e-08!33;CL:0000393!4.01e-07!39;CL:0000211!4.01e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.19e-13,33;CL:0000047,6.19e-13,33;CL:0000031,6.19e-13,33;CL:0000404,6.19e-13,33;CL:0002319,3.23e-11,43;CL:0000349,3.83e-11,3;CL:0000351,3.83e-11,3;CL:0000221,6.62e-11,44;CL:0000133,6.62e-11,44;CL:0000393,1.33e-10,39;CL:0000211,1.33e-10,39;CL:0000107,7.79e-10,9;CL:0002611,1.66e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!6.68e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,9.95e-14,6;UBERON:0005174,9.95e-14,6;UBERON:0001137,9.95e-14,6;UBERON:0003076,3.10e-13,12;UBERON:0003057,3.10e-13,12;UBERON:0010313,1.15e-11,3;UBERON:0002342,1.15e-11,3;UBERON:0002005,1.15e-11,3;UBERON:0005428,1.15e-11,3;UBERON:0005062,1.15e-11,3;UBERON:0000010,2.86e-11,11;UBERON:0000358,3.83e-11,3;UBERON:0000307,3.83e-11,3;UBERON:0007010,3.83e-11,3;UBERON:0001948,1.56e-10,5;UBERON:0002315,1.56e-10,5;UBERON:0002410,7.79e-10,9;UBERON:0001016,6.30e-09,75;UBERON:0001896,2.09e-08,2;UBERON:0002298,2.09e-08,2;UBERON:0005290,2.09e-08,2;UBERON:0010096,2.09e-08,2;UBERON:0001017,5.97e-08,73;UBERON:0002256,1.66e-07,2;UBERON:0004121,1.72e-07,95;UBERON:0000924,1.72e-07,95;UBERON:0006601,1.72e-07,95 | |||
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0,0,1.71390590642282,1.10434270475807,0,0.0958454710182364,0,0,0.766124028511126,1.22885226604995,0,0.0914876436024097,0,2.51264699101243,3.93933827022176,0.916789486660861,0.589257170947335,1.13897344639282,1.1183966749518,0.302904773332736,2.04043212288321,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.173485326766136,0.913396434936424,0.461230994512117,1.20578112442098,0.823120949949934,0.125666591329675,6.67426412882809,0.144599356919912,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0.648965052271031,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.210289948564127,0.102904612379284,0,0.264450566663544,0.639864751605702,0.696710015581316,0.644337306610467,1.00841762311671,0.667134131534611,0,0.474529061544512,1.4822905925161,0.502670417600539,1.1937388322469,1.16978452271472,0,0.432276099749388,0.597423819763102,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0.405720242777006,0.72353147925725,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0,0,0,0,0,0,0.289298117163023,0,0,0,0,4.0137647496948,2.10981035865966,0,0,1.89304931649754,2.34263246577983,6.24727853425117,0,0.891194696329576,0.283076530788832,0.809621403349789,2.63030272120181,1.18586333383957,0,0,0,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0,0.614870295887855,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0.356737635204141,0.822745103010605,0.608929898229199,0,0.847328283455281,1.7642271844397,0,0,0.120625849856312,0,0,0.874442509889552,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0.609958401380546,0.648032044930808,0.209088296014469,0.87345025498471,0.404593039154462,0.909188012978695,0.26175594198403,0.518459893167171,0,0,0,0,0,0,0,0.352071715937262,0,0.104859344425711,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.192423683280659,0,0.226730383615211,1.33191572024439,1.34570784914214,3.52557694364565,0.772758376128762,0,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.170733605754134,0,0.628839487883947,0,0.44449345560323,0.618105171716683,0.320919209591815,0,0.50695859978048,0.188626341386076,0.37456602987953,0.256100609619477,0.402048282689293,0,0.347652977834566,0.38581844092741,0,0.294397840268795,0,0.354951612318675,0.476872379894642,0.436039249896986,0.0941093804153306,0.423073039458382,0.548783918618318,0,0,0,0.237270036248348,0.197008964751127,0.409231043169689,0.309873682371932,0.385813221962283,0.249810577937946,0.935726433781634,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0,0,1.71390590642282,1.10434270475807,0,0.0958454710182364,0,0,0.766124028511126,1.22885226604995,0,0.0914876436024097,0,2.51264699101243,3.93933827022176,0.916789486660861,0.589257170947335,1.13897344639282,1.1183966749518,0.302904773332736,2.04043212288321,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.173485326766136,0.913396434936424,0.461230994512117,1.20578112442098,0.823120949949934,0.125666591329675,6.67426412882809,0.144599356919912,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0.648965052271031,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.210289948564127,0.102904612379284,0,0.264450566663544,0.639864751605702,0.696710015581316,0.644337306610467,1.00841762311671,0.667134131534611,0,0.474529061544512,1.4822905925161,0.502670417600539,1.1937388322469,1.16978452271472,0,0.432276099749388,0.597423819763102,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0.405720242777006,0.72353147925725,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0,0,0,0,0,0,0.289298117163023,0,0,0,0,4.0137647496948,2.10981035865966,0,0,1.89304931649754,2.34263246577983,6.24727853425117,0,0.891194696329576,0.283076530788832,0.809621403349789,2.63030272120181,1.18586333383957,0,0,0,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0,0.614870295887855,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0.356737635204141,0.822745103010605,0.608929898229199,0,0.847328283455281,1.7642271844397,0,0,0.120625849856312,0,0,0.874442509889552,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0.609958401380546,0.648032044930808,0.209088296014469,0.87345025498471,0.404593039154462,0.909188012978695,0.26175594198403,0.518459893167171,0,0,0,0,0,0,0,0.352071715937262,0,0.104859344425711,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.192423683280659,0,0.226730383615211,1.33191572024439,1.34570784914214,3.52557694364565,0.772758376128762,0,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.170733605754134,0,0.628839487883947,0,0.44449345560323,0.618105171716683,0.320919209591815,0,0.50695859978048,0.188626341386076,0.37456602987953,0.256100609619477,0.402048282689293,0,0.347652977834566,0.38581844092741,0,0.294397840268795,0,0.354951612318675,0.476872379894642,0.436039249896986,0.0941093804153306,0.423073039458382,0.548783918618318,0,0,0,0.237270036248348,0.197008964751127,0.409231043169689,0.309873682371932,0.385813221962283,0.249810577937946,0.935726433781634,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843 | ||
|short_description=p@chr15:98886326..98886347,+ | |short_description=p@chr15:98886326..98886347,+ | ||
}} | }} |
Latest revision as of 23:52, 5 August 2015
Short description: | p@chr15:98886326..98886347, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:98886326..98886347, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.19e-13 | 33 |
neuronal stem cell | 6.19e-13 | 33 |
neuroblast | 6.19e-13 | 33 |
electrically signaling cell | 6.19e-13 | 33 |
neural cell | 3.23e-11 | 43 |
extraembryonic cell | 3.83e-11 | 3 |
trophoblast cell | 3.83e-11 | 3 |
ectodermal cell | 6.62e-11 | 44 |
neurectodermal cell | 6.62e-11 | 44 |
electrically responsive cell | 1.33e-10 | 39 |
electrically active cell | 1.33e-10 | 39 |
autonomic neuron | 7.79e-10 | 9 |
neuron of the dorsal spinal cord | 1.66e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 9.95e-14 | 6 |
dorsal region element | 9.95e-14 | 6 |
dorsum | 9.95e-14 | 6 |
posterior neural tube | 3.10e-13 | 12 |
chordal neural plate | 3.10e-13 | 12 |
neural crest-derived structure | 1.15e-11 | 3 |
neural crest | 1.15e-11 | 3 |
enteric nervous system | 1.15e-11 | 3 |
vagal neural crest | 1.15e-11 | 3 |
neural fold | 1.15e-11 | 3 |
peripheral nervous system | 2.86e-11 | 11 |
blastocyst | 3.83e-11 | 3 |
blastula | 3.83e-11 | 3 |
cleaving embryo | 3.83e-11 | 3 |
regional part of spinal cord | 1.56e-10 | 5 |
gray matter of spinal cord | 1.56e-10 | 5 |
autonomic nervous system | 7.79e-10 | 9 |
nervous system | 6.30e-09 | 75 |
medulla oblongata | 2.09e-08 | 2 |
brainstem | 2.09e-08 | 2 |
myelencephalon | 2.09e-08 | 2 |
future myelencephalon | 2.09e-08 | 2 |
central nervous system | 5.97e-08 | 73 |
dorsal horn of spinal cord | 1.66e-07 | 2 |
ectoderm-derived structure | 1.72e-07 | 95 |
ectoderm | 1.72e-07 | 95 |
presumptive ectoderm | 1.72e-07 | 95 |