FFCP PHASE1:Mm9::chr16:17530781..17530882,-: Difference between revisions
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{{FFCP|EntrezGene=69009|HGNC=|MCL_coexpression_id=1280|UniProt=|association_with_transcript=0bp_to_uc007ylc.1_5end|description=CAGE_peak_2_at_Thap7_5end|id=chr16:17530781..17530882,-|ontology_enrichment_celltype=CL:0000055!1.73e-10!50;CL:0002319!6.52e-09!43;CL:0000221!2.15e-08!44;CL:0000133!2.15e-08!44;CL:0000393!5.96e-08!39;CL:0000211!5.96e-08!39|ontology_enrichment_celltype_v019_2=CL:0002319,6.52e-09,43;CL:0000221,2.15e-08,44;CL:0000133,2.15e-08,44;CL:0000393,5.96e-08,39;CL:0000211,5.96e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.40e-18!73;UBERON:0005743!2.40e-18!73;UBERON:0000073!5.94e-17!75;UBERON:0001016!5.94e-17!75;UBERON:0001049!3.07e-13!52;UBERON:0005068!3.07e-13!52;UBERON:0006241!3.07e-13!52;UBERON:0007135!3.07e-13!52;UBERON:0002616!8.22e-12!49;UBERON:0000955!1.11e-11!50;UBERON:0006238!1.11e-11!50;UBERON:0003080!2.08e-11!40;UBERON:0002780!2.22e-11!39;UBERON:0001890!2.22e-11!39;UBERON:0006240!2.22e-11!39;UBERON:0000153!2.38e-10!94;UBERON:0004121!3.26e-10!102;UBERON:0000924!3.26e-10!102;UBERON:0006601!3.26e-10!102;UBERON:0007811!1.48e-09!86;UBERON:0002346!3.00e-09!71;UBERON:0003075!3.00e-09!71;UBERON:0007284!3.00e-09!71;UBERON:0002020!5.69e-09!34;UBERON:0000033!4.66e-08!63;UBERON:0002791!5.88e-08!29;UBERON:0003528!5.88e-08!29;UBERON:0001893!5.88e-08!29;UBERON:0003056!9.46e-08!49;UBERON:0000956!4.90e-07!21;UBERON:0001869!4.90e-07!21;UBERON:0000203!4.90e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.40e-18,73;UBERON:0001016,5.94e-17,75;UBERON:0001049,3.07e-13,52;UBERON:0005068,3.07e-13,52;UBERON:0006241,3.07e-13,52;UBERON:0007135,3.07e-13,52;UBERON:0000073,6.15e-13,54;UBERON:0002616,1.06e-12,46;UBERON:0000955,1.53e-12,47;UBERON:0006238,1.53e-12,47;UBERON:0003080,2.08e-11,40;UBERON:0002780,2.22e-11,39;UBERON:0001890,2.22e-11,39;UBERON:0006240,2.22e-11,39;UBERON:0004121,9.55e-11,95;UBERON:0000924,9.55e-11,95;UBERON:0006601,9.55e-11,95;UBERON:0002346,4.95e-10,64;UBERON:0003075,4.95e-10,64;UBERON:0007284,4.95e-10,64;UBERON:0002020,5.69e-09,34;UBERON:0003528,5.88e-08,29;UBERON:0002791,5.88e-08,29;UBERON:0001893,5.88e-08,29;UBERON:0003056,9.45e-08,49;UBERON:0010371,1.52e-07,73;UBERON:0000956,4.90e-07,21;UBERON:0001869,4.90e-07,21;UBERON:0000203,4.90e-07,21|phase1_expression=5.2849119544582,3.48975407639361,2.27499619694768,2.41971369045464,4.00716583957078,1.51091344720701,3.03696432774183,9.8133725815598,4.646027831005,5.85161315804984,9.93064215707929,5.58405112967355,10.4432445258036,7.78041581529077,2.6648780945253,3.44207954562704,3.49780939064073,2.99689057090326,4.2505474417779,8.06340338416257,14.7124891961351,7.84398514486994,9.14199261986274,4.47978783821539,3.67054849707472,2.29692785646008,2.15380998079537,2.58565479223067,6.08074942260396,6.30075324399827,3.99114919179548,6.98533740805594,6.76571266343027,0,2.02196133825892,2.65975432573588,1.83752420636132,1.67412652294763,3.906676722619,2.61761871986899,2.35292595212406,2.73218193983378,4.36959317728038,7.42791226055906,7.50189291024408,6.60768307782054,37.5547845287059,14.3896603211095,11.8630538676615,15.1655321277941,11.7588594165305,18.6878333674463,3.85899993932794,2.17608642603403,6.72187598284928,6.94600477297057,10.3152038377952,9.7977697532714,7.28339259094552,7.40587370980846,8.87363964908651,11.8595586224196,14.2287167377782,19.7977937801908,15.8218618010716,28.419204597844,17.0772062995491,21.9004434033286,4.97710139080693,7.42532660824299,7.15104868594699,7.42692559449889,7.73039893330647,5.14461356702807,5.17565543498476,6.43453150627015,2.20231761998777,6.38436690425939,4.45458946443106,7.91317726381163,5.85520919055422,5.2091337055676,6.97957497503452,6.19038871034848,5.80633341551878,5.30331453852602,5.55249555116501,7.45597783301202,2.65041676666144,2.94729084416464,6.08715426273523,3.44169550792555,1.3599426674155,4.85732872474035,6.49776417447669,5.37632264516803,7.02222100658759,3.74946709671727,5.71529210126311,6.71345191569646,3.09855523508697,6.41632387071589,12.7402619853323,0,6.49473123033642,3.54703811665138,4.54972000513305,6.05174562511018,4.40194402200192,5.64080128446334,4.51061849591953,2.74018930480927,5.07354093963329,3.91878865436819,3.88042733547826,6.78599593180248,4.44950941921873,6.79616977523585,7.96149496754887,4.69123864847487,3.3126227769059,2.42437626567611,3.72783522436244,5.27005434620785,7.12118803165747,4.85368404896324,1.7972268675888,1.19980546198682,1.27070227073065,5.54225365797844,4.57500602818627,7.413606774659,8.69121600961382,8.95004100656157,4.98691306942944,7.94982189032012,5.70300437561771,4.47865094196335,7.32895999457657,3.78795340595653,4.03373373184381,3.90833577536904,3.24111833649629,3.76762044589288,3.87808045162569,3.97152532883034,3.37326208415024,2.84573707812917,4.74249584452253,3.9712276835242,7.2139960907219,7.89104636739269,6.11703948296315,6.268538997399,6.1734640922383,3.98068533636986,1.40442637462647,2.31613116403244,2.55747149456033,3.10688658803253,1.87620847984877,2.52086886045421,2.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69009 | |||
|HGNC= | |||
|MCL_coexpression_id=1280 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc007ylc.1_5end | |||
|cluster_id=chr16:17530781..17530882,- | |||
|description=CAGE_peak_2_at_Thap7_5end | |||
|id=chr16:17530781..17530882,- | |||
|ontology_enrichment_celltype=CL:0000055!1.73e-10!50;CL:0002319!6.52e-09!43;CL:0000221!2.15e-08!44;CL:0000133!2.15e-08!44;CL:0000393!5.96e-08!39;CL:0000211!5.96e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.52e-09,43;CL:0000221,2.15e-08,44;CL:0000133,2.15e-08,44;CL:0000393,5.96e-08,39;CL:0000211,5.96e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.40e-18!73;UBERON:0005743!2.40e-18!73;UBERON:0000073!5.94e-17!75;UBERON:0001016!5.94e-17!75;UBERON:0001049!3.07e-13!52;UBERON:0005068!3.07e-13!52;UBERON:0006241!3.07e-13!52;UBERON:0007135!3.07e-13!52;UBERON:0002616!8.22e-12!49;UBERON:0000955!1.11e-11!50;UBERON:0006238!1.11e-11!50;UBERON:0003080!2.08e-11!40;UBERON:0002780!2.22e-11!39;UBERON:0001890!2.22e-11!39;UBERON:0006240!2.22e-11!39;UBERON:0000153!2.38e-10!94;UBERON:0004121!3.26e-10!102;UBERON:0000924!3.26e-10!102;UBERON:0006601!3.26e-10!102;UBERON:0007811!1.48e-09!86;UBERON:0002346!3.00e-09!71;UBERON:0003075!3.00e-09!71;UBERON:0007284!3.00e-09!71;UBERON:0002020!5.69e-09!34;UBERON:0000033!4.66e-08!63;UBERON:0002791!5.88e-08!29;UBERON:0003528!5.88e-08!29;UBERON:0001893!5.88e-08!29;UBERON:0003056!9.46e-08!49;UBERON:0000956!4.90e-07!21;UBERON:0001869!4.90e-07!21;UBERON:0000203!4.90e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.40e-18,73;UBERON:0001016,5.94e-17,75;UBERON:0001049,3.07e-13,52;UBERON:0005068,3.07e-13,52;UBERON:0006241,3.07e-13,52;UBERON:0007135,3.07e-13,52;UBERON:0000073,6.15e-13,54;UBERON:0002616,1.06e-12,46;UBERON:0000955,1.53e-12,47;UBERON:0006238,1.53e-12,47;UBERON:0003080,2.08e-11,40;UBERON:0002780,2.22e-11,39;UBERON:0001890,2.22e-11,39;UBERON:0006240,2.22e-11,39;UBERON:0004121,9.55e-11,95;UBERON:0000924,9.55e-11,95;UBERON:0006601,9.55e-11,95;UBERON:0002346,4.95e-10,64;UBERON:0003075,4.95e-10,64;UBERON:0007284,4.95e-10,64;UBERON:0002020,5.69e-09,34;UBERON:0003528,5.88e-08,29;UBERON:0002791,5.88e-08,29;UBERON:0001893,5.88e-08,29;UBERON:0003056,9.45e-08,49;UBERON:0010371,1.52e-07,73;UBERON:0000956,4.90e-07,21;UBERON:0001869,4.90e-07,21;UBERON:0000203,4.90e-07,21 | |||
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| |||
|short_description=p2@Thap7 | |||
}} |
Revision as of 02:37, 6 August 2015
Short description: | p2@Thap7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Thap7_5end |
Coexpression cluster: | MCL_coexpression_mm9:1280 |
Association with transcript: | 0bp_to_uc007ylc.1_5end |
EntrezGene: | 69009 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.52e-09 | 43 |
ectodermal cell | 2.15e-08 | 44 |
neurectodermal cell | 2.15e-08 | 44 |
electrically responsive cell | 5.96e-08 | 39 |
electrically active cell | 5.96e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.40e-18 | 73 |
nervous system | 5.94e-17 | 75 |
neural tube | 3.07e-13 | 52 |
neural rod | 3.07e-13 | 52 |
future spinal cord | 3.07e-13 | 52 |
neural keel | 3.07e-13 | 52 |
regional part of nervous system | 6.15e-13 | 54 |
regional part of brain | 1.06e-12 | 46 |
brain | 1.53e-12 | 47 |
future brain | 1.53e-12 | 47 |
anterior neural tube | 2.08e-11 | 40 |
regional part of forebrain | 2.22e-11 | 39 |
forebrain | 2.22e-11 | 39 |
future forebrain | 2.22e-11 | 39 |
ectoderm-derived structure | 9.55e-11 | 95 |
ectoderm | 9.55e-11 | 95 |
presumptive ectoderm | 9.55e-11 | 95 |
neurectoderm | 4.95e-10 | 64 |
neural plate | 4.95e-10 | 64 |
presumptive neural plate | 4.95e-10 | 64 |
gray matter | 5.69e-09 | 34 |
brain grey matter | 5.88e-08 | 29 |
regional part of telencephalon | 5.88e-08 | 29 |
telencephalon | 5.88e-08 | 29 |
pre-chordal neural plate | 9.45e-08 | 49 |
ecto-epithelium | 1.52e-07 | 73 |
cerebral cortex | 4.90e-07 | 21 |
cerebral hemisphere | 4.90e-07 | 21 |
pallium | 4.90e-07 | 21 |