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FFCP PHASE1:Mm9::chr6:87995184..87995262,-: Difference between revisions

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{{FFCP|EntrezGene=19349|HGNC=|MCL_coexpression_id=2709|UniProt=P51150|association_with_transcript=0bp_to_ENSMUST00000113596,uc009cuy.1,uc009cuz.1_5end|description=CAGE_peak_1_at_Rab7_5end|id=chr6:87995184..87995262,-|ontology_enrichment_celltype=CL:0000055!4.44e-12!50;CL:0002319!5.87e-10!43;CL:0000221!3.05e-09!44;CL:0000133!3.05e-09!44;CL:0000393!1.98e-07!39;CL:0000211!1.98e-07!39;CL:0000333!5.97e-07!10;CL:0000095!5.97e-07!10;CL:0000243!5.97e-07!10;CL:0000123!5.97e-07!10;CL:0000125!5.97e-07!10;CL:0000030!5.97e-07!10;CL:0000339!5.97e-07!10|ontology_enrichment_celltype_v019_2=CL:0002319,5.87e-10,43;CL:0000221,3.05e-09,44;CL:0000133,3.05e-09,44;CL:0000393,1.98e-07,39;CL:0000211,1.98e-07,39;CL:0000333,5.97e-07,10;CL:0000095,5.97e-07,10;CL:0000243,5.97e-07,10;CL:0000123,5.97e-07,10;CL:0000125,5.97e-07,10;CL:0000030,5.97e-07,10;CL:0000339,5.97e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.05e-15!75;UBERON:0001016!3.05e-15!75;UBERON:0001017!3.07e-14!73;UBERON:0005743!3.07e-14!73;UBERON:0004121!7.39e-13!102;UBERON:0000924!7.39e-13!102;UBERON:0006601!7.39e-13!102;UBERON:0004111!4.95e-11!122;UBERON:0000025!1.04e-10!114;UBERON:0002020!3.21e-10!34;UBERON:0001049!5.26e-10!52;UBERON:0005068!5.26e-10!52;UBERON:0006241!5.26e-10!52;UBERON:0007135!5.26e-10!52;UBERON:0000955!1.09e-09!50;UBERON:0006238!1.09e-09!50;UBERON:0002616!3.24e-09!49;UBERON:0002791!1.05e-08!29;UBERON:0003528!1.05e-08!29;UBERON:0001893!1.05e-08!29;UBERON:0007023!4.02e-08!51|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.05e-15,75;UBERON:0001017,3.07e-14,73;UBERON:0004121,9.69e-14,95;UBERON:0000924,9.69e-14,95;UBERON:0006601,9.69e-14,95;UBERON:0004111,4.95e-11,122;UBERON:0000073,1.01e-10,54;UBERON:0000025,1.04e-10,114;UBERON:0002020,3.21e-10,34;UBERON:0001049,5.26e-10,52;UBERON:0005068,5.26e-10,52;UBERON:0006241,5.26e-10,52;UBERON:0007135,5.26e-10,52;UBERON:0003528,1.05e-08,29;UBERON:0002791,1.05e-08,29;UBERON:0001893,1.05e-08,29;UBERON:0000955,1.68e-08,47;UBERON:0006238,1.68e-08,47;UBERON:0007023,4.02e-08,51;UBERON:0002616,4.81e-08,46;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64;UBERON:0010371,2.16e-07,73|phase1_expression=78.7932327755586,130.516802457121,119.664799959448,111.911758183527,100.179145989269,82.4287225087379,85.5022264579624,92.4522995841686,138.254525152937,117.500392213641,91.0879590959687,106.256515781788,86.7987700751213,111.461013084222,92.9376235465699,84.6346617689472,64.3596927877895,100.474699666599,100.641994266612,84.877930359606,167.280151727154,102.07109783451,95.3379230357114,110.074786881864,97.4989444535473,103.935985504819,112.428880997519,119.371062907983,145.557939303582,105.852654499171,107.539297667823,24.7661962649256,24.6025915033828,0,62.9696531057779,71.8133667948687,62.6799923725473,400.534770615221,291.438083507378,318.825960080043,392.938634004718,386.60374448648,340.82826782787,272.566610917125,270.879160218543,191.806356008957,328.604364626176,250.292879524753,315.469358406702,334.224996508693,273.393481434333,240.066782489503,109.72982436176,128.389099136008,111.247047516156,241.566610437754,222.063415952536,244.428571739508,203.530359624755,194.139689392836,183.811107016792,194.835605939751,210.76286667834,417.103518959928,383.680148675986,373.712540461649,310.086114386549,293.542785265668,143.71380265955,155.121823143113,144.282923487048,234.805109179927,245.384948997243,139.149547908188,172.042620477734,137.882817991503,226.838714858741,257.545360917824,257.444549737464,204.29185969407,239.697626238313,188.04972677099,277.507901007373,213.849791812038,242.185222726244,192.097837728831,210.140600859476,193.669024212487,279.051022432783,247.950288710363,216.528773060153,137.667820317022,237.989966797713,208.325431972197,176.089409128318,168.906136435696,188.055078556416,246.61267677045,186.786137309463,163.242883423777,92.5341267932791,121.910153543602,163.075353412253,142.213340630666,92.8746565938109,103.117465248365,80.8839112023653,188.28921765673,317.71678323508,213.608238114283,86.3956927295357,111.129899583932,133.756988408514,129.32002559415,147.103472626767,181.588224471381,308.993709667967,247.120300976129,176.037499838025,143.810729603247,148.626341923845,118.309561764994,115.562891955236,221.34228254073,191.853183441125,146.88780674494,106.635460810269,88.7856041870243,104.832937335278,272.019801159158,253.912834564338,157.319248845306,276.206844785527,251.879725470376,269.29330574919,228.760180925538,116.402392880912,138.589365259644,206.221770881879,216.544669707182,77.0313022339206,88.972114415754,113.43914177737,104.137029124479,119.676202007186,119.14575986491,119.938207436453,159.878683116712,112.742060303876,101.360858969951,87.4477087094826,97.1037094654156,94.8141119859289,156.713474934975,154.748166578773,74.4388157901165,100.416485785793,103.71120656723,120.485323743731,140.845525324141,109.05461789121,116.140029642355,157.435249164165,113.336197486505,118.939944036169,133.9395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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:19349
|HGNC=
|MCL_coexpression_id=2709
|TSSclassifier=NA
|UniProt=uniprot:P51150
|association_with_transcript=0bp_to_ENSMUST00000113596,uc009cuy.1,uc009cuz.1_5end
|cluster_id=chr6:87995184..87995262,-
|description=CAGE_peak_1_at_Rab7_5end
|id=chr6:87995184..87995262,-
|ontology_enrichment_celltype=CL:0000055!4.44e-12!50;CL:0002319!5.87e-10!43;CL:0000221!3.05e-09!44;CL:0000133!3.05e-09!44;CL:0000393!1.98e-07!39;CL:0000211!1.98e-07!39;CL:0000333!5.97e-07!10;CL:0000095!5.97e-07!10;CL:0000243!5.97e-07!10;CL:0000123!5.97e-07!10;CL:0000125!5.97e-07!10;CL:0000030!5.97e-07!10;CL:0000339!5.97e-07!10
|ontology_enrichment_celltype_v019_2=CL:0002319,5.87e-10,43;CL:0000221,3.05e-09,44;CL:0000133,3.05e-09,44;CL:0000393,1.98e-07,39;CL:0000211,1.98e-07,39;CL:0000333,5.97e-07,10;CL:0000095,5.97e-07,10;CL:0000243,5.97e-07,10;CL:0000123,5.97e-07,10;CL:0000125,5.97e-07,10;CL:0000030,5.97e-07,10;CL:0000339,5.97e-07,10
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.05e-15!75;UBERON:0001016!3.05e-15!75;UBERON:0001017!3.07e-14!73;UBERON:0005743!3.07e-14!73;UBERON:0004121!7.39e-13!102;UBERON:0000924!7.39e-13!102;UBERON:0006601!7.39e-13!102;UBERON:0004111!4.95e-11!122;UBERON:0000025!1.04e-10!114;UBERON:0002020!3.21e-10!34;UBERON:0001049!5.26e-10!52;UBERON:0005068!5.26e-10!52;UBERON:0006241!5.26e-10!52;UBERON:0007135!5.26e-10!52;UBERON:0000955!1.09e-09!50;UBERON:0006238!1.09e-09!50;UBERON:0002616!3.24e-09!49;UBERON:0002791!1.05e-08!29;UBERON:0003528!1.05e-08!29;UBERON:0001893!1.05e-08!29;UBERON:0007023!4.02e-08!51
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.05e-15,75;UBERON:0001017,3.07e-14,73;UBERON:0004121,9.69e-14,95;UBERON:0000924,9.69e-14,95;UBERON:0006601,9.69e-14,95;UBERON:0004111,4.95e-11,122;UBERON:0000073,1.01e-10,54;UBERON:0000025,1.04e-10,114;UBERON:0002020,3.21e-10,34;UBERON:0001049,5.26e-10,52;UBERON:0005068,5.26e-10,52;UBERON:0006241,5.26e-10,52;UBERON:0007135,5.26e-10,52;UBERON:0003528,1.05e-08,29;UBERON:0002791,1.05e-08,29;UBERON:0001893,1.05e-08,29;UBERON:0000955,1.68e-08,47;UBERON:0006238,1.68e-08,47;UBERON:0007023,4.02e-08,51;UBERON:0002616,4.81e-08,46;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64;UBERON:0010371,2.16e-07,73
|phase1_expression=78.7932327755586,130.516802457121,119.664799959448,111.911758183527,100.179145989269,82.4287225087379,85.5022264579624,92.4522995841686,138.254525152937,117.500392213641,91.0879590959687,106.256515781788,86.7987700751213,111.461013084222,92.9376235465699,84.6346617689472,64.3596927877895,100.474699666599,100.641994266612,84.877930359606,167.280151727154,102.07109783451,95.3379230357114,110.074786881864,97.4989444535473,103.935985504819,112.428880997519,119.371062907983,145.557939303582,105.852654499171,107.539297667823,24.7661962649256,24.6025915033828,0,62.9696531057779,71.8133667948687,62.6799923725473,400.534770615221,291.438083507378,318.825960080043,392.938634004718,386.60374448648,340.82826782787,272.566610917125,270.879160218543,191.806356008957,328.604364626176,250.292879524753,315.469358406702,334.224996508693,273.393481434333,240.066782489503,109.72982436176,128.389099136008,111.247047516156,241.566610437754,222.063415952536,244.428571739508,203.530359624755,194.139689392836,183.811107016792,194.835605939751,210.76286667834,417.103518959928,383.680148675986,373.712540461649,310.086114386549,293.542785265668,143.71380265955,155.121823143113,144.282923487048,234.805109179927,245.384948997243,139.149547908188,172.042620477734,137.882817991503,226.838714858741,257.545360917824,257.444549737464,204.29185969407,239.697626238313,188.04972677099,277.507901007373,213.849791812038,242.185222726244,192.097837728831,210.140600859476,193.669024212487,279.051022432783,247.950288710363,216.528773060153,137.667820317022,237.989966797713,208.325431972197,176.089409128318,168.906136435696,188.055078556416,246.61267677045,186.786137309463,163.242883423777,92.5341267932791,121.910153543602,163.075353412253,142.213340630666,92.8746565938109,103.117465248365,80.8839112023653,188.28921765673,317.71678323508,213.608238114283,86.3956927295357,111.129899583932,133.756988408514,129.32002559415,147.103472626767,181.588224471381,308.993709667967,247.120300976129,176.037499838025,143.810729603247,148.626341923845,118.309561764994,115.562891955236,221.34228254073,191.853183441125,146.88780674494,106.635460810269,88.7856041870243,104.832937335278,272.019801159158,253.912834564338,157.319248845306,276.206844785527,251.879725470376,269.29330574919,228.760180925538,116.402392880912,138.589365259644,206.221770881879,216.544669707182,77.0313022339206,88.972114415754,113.43914177737,104.137029124479,119.676202007186,119.14575986491,119.938207436453,159.878683116712,112.742060303876,101.360858969951,87.4477087094826,97.1037094654156,94.8141119859289,156.713474934975,154.748166578773,74.4388157901165,100.416485785793,103.71120656723,120.485323743731,140.845525324141,109.05461789121,116.140029642355,157.435249164165,113.336197486505,118.939944036169,133.939552176235,134.941520904008,150.16023028418,144.648108073949,160.063277477118,190.268496004123,188.744183766104,205.279357797132,216.206540622959,241.833440848746,174.834936432404,178.426142811251,142.53885543165,80.6229587023184,91.0367753692919,134.537629620265,166.590591338881,160.334569612152,176.339155406342,138.562485970997,177.710172147208,153.565812576965,188.013866078888,170.788540316349,157.293396514489,115.417718633087,139.797173824566,143.199265219577,84.6581478438091,118.343122456734,95.5124727594524,104.152485609015,123.509178826851,168.58860797327,225.253085816873,213.047273680746,208.294412699999,218.189133536142,106.7808676583,102.603795449092,114.679677316275,113.398807856173,114.317973722646,100.322585601879,123.997035241299,143.651810922681,127.39649571927,163.895755441184,176.394809194871,149.466045421875,190.697052850069,186.214515235745,234.467551382596,234.636551511588,78.6389358847512,102.504970182034,76.3852885988347,86.3660113701688,131.157399576942,162.107719443375,194.15797961851,172.610482796279,170.306346339908,184.01080303074,181.888279334469,194.443289580998,219.866569043898,381.501948366359,271.408936225536,222.769215677623,188.464797726132,286.743353718196,260.67879098106,149.344735238151,231.010898392001,160.909191902291,155.394620230062,148.857567833364,165.366408183166,158.409857272582,185.132051135896,172.449358913505,176.814794036344,174.321910074417,273.76576159138,159.966476029719,111.825199103036,109.460036685603,167.279704694151,188.498096442747,78.175364841904,84.952919507095,110.145366577444,145.28853129734,144.187084385702,127.405148531933,122.510866833919,125.843574569807,138.740136733823,129.664888547248,159.86009203469,168.517604848125,72.564620894618,100.899773350549,76.73265854131,111.192326493706,106.664552926038,125.221804678214,92.2528795817236,184.921305954204,171.160313257967,170.027394900376,258.706530865182,185.199697420204,162.181455131811,140.859365923701,152.815177662652,142.242648275367,304.653771203267,104.572979048286,101.129565301979,118.709692043985,90.7935962762611,104.0243072957,87.8508185113047,119.154879425693,118.958734475109,122.030576869306,276.854479224383,99.9621739716388,115.48545732805,103.793132529751,118.971240432233,125.340111590306,139.180005469135,159.521169549898,168.047314753747,149.575679178729,177.081704229774,63.6973020713135,93.8963909156187,72.3053603297517,97.808947737056,80.0790905561933,92.5879567689464,100.223081803474,90.3618430817014,80.9514138966488,66.1940491063257,76.0399216520765,126.404448251271,73.3865279350394,91.5154628338611,92.3737051372123,100.613002965125,122.785077254822,98.8006595054144,98.8042936797922,99.4519531989254,102.955395790905,100.221228026019,111.589273447017,97.6550192649344,100.397258973968,176.169508069019,103.22346831894,89.7138566094757,139.176346965821,240.714234164109,193.68831466562,157.144093621313,193.574646308396,201.130413718181,261.480103131702,267.44896241067,239.470324617668,198.146719242272,250.740202236055,227.3735631143,245.033167584146,223.809638002438,251.494036986234,248.524949640874,90.3987797458179,124.495760501122,96.2937536453317,115.232583890371,118.850663210066,137.331100812161,138.459711420406,132.27450674737,145.055482735501,133.171430599521,141.187970038864,141.281129698171,143.27150642892,157.437849763574,149.217348346683,147.651044297753,140.799456022999,140.437912497577,123.213684340189,133.067823801495,115.88980730627,117.488983677481,133.5242663705,123.399107720847,142.011055046734,132.929548997824,131.525212495523,126.010391778727,136.754742642783,114.473023418179,121.482258559154,136.724221537282,131.36316485747,141.612272843973,130.790682245214,153.883316009775,164.219989128677,182.425524887005,199.896307011941,153.311036288063,170.190991345389
|short_description=p1@Rab7
}}

Revision as of 06:40, 6 August 2015

Short description:p1@Rab7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rab7_5end
Coexpression cluster:MCL_coexpression_mm9:2709
Association with transcript: 0bp_to_ENSMUST00000113596, uc009cuy.1, uc009cuz.1_5end
EntrezGene:19349
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rab7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G778.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5130.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6119.66
CD326+ enterocyte, pool1.CNhs13542.11848-124I3111.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I4100.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I782.43
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I885.50
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E992.45
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7138.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2117.50
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E691.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1106.26
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E486.80
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8111.46
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A192.94
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A384.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A564.36
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2100.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4100.64
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A684.88
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3167.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2102.07
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I995.34
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1110.07
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D297.50
GP2+ M cell, pool1.CNhs13228.11845-124H9103.94
GP2+ M cell, pool2.CNhs13231.11846-124I1112.43
GP2+ M cell, pool3.CNhs13240.11847-124I2119.37
Ileum epithelium, pool1.CNhs13199.10252-104B9145.56
Ileum epithelium, pool2.CNhs13232.10253-104C1105.85
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8107.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I324.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G624.60
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F562.97
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F671.81
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F762.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8400.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1291.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3318.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9392.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2386.60
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4340.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8272.57
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9270.88
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3191.81
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7328.60
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2250.29
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8315.47
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3334.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C4273.39
Mouse Astrocytes, donor3.CNhs12107.11633-122C4240.07
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2109.73
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9128.39
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1111.25
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1241.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1222.06
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5244.43
Mouse Granule cells, donor1.CNhs12131.11713-123C3203.53
Mouse Granule cells, donor2.CNhs12357.11731-123E3194.14
Mouse Granule cells, donor3.CNhs12108.11636-122C7183.81
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6194.84
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1210.76
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7417.10
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7383.68
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2373.71
Mouse Microglia, donor1.CNhs12629.11718-123C8310.09
Mouse Microglia, donor2.CNhs12634.11736-123E8293.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5143.71
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5155.12
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9144.28
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1234.81
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5245.38
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2139.15
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2172.04
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6137.88
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3226.84
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3257.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7257.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4204.29
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4239.70
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8188.05
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4277.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5213.85
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6242.19
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6192.10
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6210.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1193.67
Mouse Schwann, donor1.CNhs12507.11728-123D9279.05
Mouse Schwann, donor2.CNhs12573.11746-123F9247.95
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3216.53
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7137.67
Mouse hepatocyte, donor1.CNhs13078.11714-123C4237.99
Mouse hepatocyte, donor3.CNhs12615.11637-122C8208.33
Mouse hepatocyte, donor6.CNhs13090.11822-124F4176.09
Mouse hepatocyte, donor8.CNhs13091.11824-124F6168.91
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7188.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7246.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3186.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8163.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G692.53
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1121.91
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8163.08
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6142.21
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G192.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2103.12
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G380.88
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6188.29
accessory axillary lymph node, adult.CNhs10475.1063-29H9317.72
adrenal gland, adult.CNhs10508.49-24D7213.61
adrenal gland, embryo E14.CNhs11038.406-44C586.40
adrenal gland, embryo E16.CNhs11004.1254-43D6111.13
adrenal gland, embryo E17.CNhs11043.1263-45I1133.76
adrenal gland, embryo E18.CNhs11026.1262-18F5129.32
adrenal gland, neonate N00.CNhs11191.1311-23C1147.10
adrenal gland, neonate N25.CNhs11223.1377-27I3181.59
amnion, adult pregnant day17.5.CNhs10488.583-22A8308.99
aorta, adult.CNhs10498.46-23H1247.12
bone (os femoris), adult.CNhs10483.56-12G2176.04
bone (os femoris), neonate N02.CNhs11227.1985-43F5143.81
bone (os femoris), neonate N16.CNhs11225.1525-43A6148.63
bone (os femoris), neonate N20.CNhs11195.1350-25C3118.31
cecum, adult.CNhs10467.37-13H4115.56
cerebellum, adult.CNhs10494.15-8B2221.34
cerebellum, neonate N30.CNhs11135.1395-42I2191.85
colon, adult.CNhs10468.36-18H7146.89
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7106.64
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D188.79
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4104.83
corpora quadrigemina, adult.CNhs10501.16-22A4272.02
corpus striatum, adult.CNhs10487.19-21D8253.91
corpus striatum, neonate N00.CNhs11226.630-43F1157.32
cortex, adult.CNhs10473.12-14D5276.21
cortex, neonate N30.CNhs11107.1392-42F2251.88
diencephalon, adult.CNhs10482.20-12F2269.29
diencephalon, neonate N30.CNhs11201.1388-42B2228.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1116.40
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2138.59
epididymis, adult.CNhs10490.58-23B2206.22
eyeball, adult.CNhs10484.31-12G4216.54
eyeball, embryo E12.CNhs11016.345-16C677.03
eyeball, embryo E14.CNhs10521.399-16E288.97
eyeball, embryo E15.CNhs10593.426-16C9113.44
eyeball, embryo E17.CNhs11023.1261-18D4104.14
eyeball, neonate N00.CNhs11207.633-15C6119.68
eyeball, neonate N01.CNhs11140.1532-43E7119.15
eyeball, neonate N02.CNhs11205.1551-44G8119.94
eyeball, neonate N16.CNhs11188.777-19A2159.88
forelimb, embryo E11.CNhs10596.335-25E2112.74
forelimb, embryo E12.CNhs10600.359-14H2101.36
forelimb, embryo E13.CNhs10589.384-1E287.45
forelimb, embryo E14.CNhs10577.413-26A897.10
forelimb, embryo E15.CNhs11007.437-20E794.81
forelimb, embryo E17.CNhs10598.1517-43C4156.71
forelimb, embryo E18.CNhs11008.1520-43B5154.75
gonad, embryo E13.CNhs11044.1564-45I674.44
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8100.42
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2103.71
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5120.49
heart, embryo E11.CNhs10586.331-24E9140.85
heart, embryo E12.CNhs11015.353-12F5109.05
heart, embryo E13.CNhs11013.376-3I9116.14
heart, embryo E14.CNhs10597.403-26D4157.44
heart, embryo E15.CNhs11017.431-16C8113.34
heart, embryo E16.CNhs11021.457-17C6118.94
heart, embryo E17.CNhs11025.479-18E5133.94
heart, embryo E18.CNhs11030.1283-20G3134.94
heart, neonate N00.CNhs11213.639-21E3150.16
heart, neonate N03.CNhs11221.1349-25I2144.65
heart, neonate N10.CNhs11118.749-24G1160.06
heart, neonate N16.CNhs11209.782-15G1190.27
heart, neonate N20.CNhs11127.821-26I6188.74
heart, neonate N25.CNhs11196.1351-25D3205.28
heart, neonate N30.CNhs11202.1390-42D2216.21
hippocampus, adult.CNhs10478.13-16E8241.83
hippocampus, neonate N00.CNhs11228.627-43G1174.83
intestinal mucosa, adult.CNhs10506.860-29I3178.43
intestine, adult.CNhs10496.178-9A3142.54
intestine, embryo E12.CNhs11019.1251-16I580.62
intestine, embryo E13.CNhs11010.381-16D591.04
intestine, embryo E15.CNhs10602.976-16D8134.54
intestine, embryo E16.CNhs10585.463-22H4166.59
intestine, embryo E17.CNhs10582.482-18D3160.33
intestine, embryo E18.CNhs10526.1289-20F7176.34
intestine, neonate N00.CNhs11126.644-26D1138.56
intestine, neonate N01.CNhs11192.1322-23E9177.71
intestine, neonate N06.CNhs11102.688-20B8153.57
intestine, neonate N07.CNhs11095.720-20F2188.01
intestine, neonate N10.CNhs11098.755-23A5170.79
intestine, neonate N20.CNhs11187.827-18D1157.29
intestine, neonate N25.CNhs11121.1352-25E3115.42
intestine, neonate N30.CNhs11131.1384-42G1139.80
kidney, embryo E14.CNhs10606.411-4I9143.20
kidney, embryo E15.CNhs10997.434-16F884.66
kidney, embryo E16.CNhs10584.464-22A5118.34
kidney, embryo E17.CNhs11028.483-18I295.51
kidney, embryo E18.CNhs11001.1288-20C7104.15
kidney, neonate N00.CNhs11214.646-21G7123.51
kidney, neonate N10.CNhs11206.758-6D5168.59
kidney, neonate N20.CNhs11113.832-19I1225.25
kidney, neonate N25.CNhs11122.1353-25F3213.05
kidney, neonate N30.CNhs11203.1385-42H1208.29
liver, adult pregnant day01.CNhs10466.508-5B2218.19
liver, embryo E12.CNhs10601.355-15F8106.78
liver, embryo E13.CNhs10524.378-3H6102.60
liver, embryo E14.CNhs10594.409-16E1114.68
liver, embryo E15.CNhs10520.433-16D7113.40
liver, embryo E16.CNhs10523.462-17F5114.32
liver, embryo E17.CNhs10510.481-18A3100.32
liver, embryo E18.CNhs10579.499-43G4124.00
liver, neonate N00.CNhs11117.641-24F4143.65
liver, neonate N03.CNhs11123.1345-25G2127.40
liver, neonate N06.CNhs11101.684-20A8163.90
liver, neonate N07.CNhs11103.716-20H2176.39
liver, neonate N10.CNhs11115.751-24B9149.47
liver, neonate N20.CNhs11220.823-25A3190.70
liver, neonate N25.CNhs11198.1368-26H1186.21
liver, neonate N30.CNhs11106.1382-42D1234.47
lung, adult.CNhs10474.28-22B1234.64
lung, embryo E12.CNhs10522.354-16G278.64
lung, embryo E14.CNhs10604.404-26F8102.50
lung, embryo E15.CNhs11020.432-17C576.39
lung, embryo E16.CNhs10998.458-17B686.37
lung, embryo E17.CNhs10605.480-44A6131.16
lung, embryo E18.CNhs10583.1287-20I6162.11
lung, neonate N00.CNhs11224.640-42C6194.16
lung, neonate N06.CNhs11212.683-20E5172.61
lung, neonate N07.CNhs11111.715-19A3170.31
lung, neonate N10.CNhs11219.750-23E6184.01
lung, neonate N20.CNhs11109.822-18A4181.89
lung, neonate N25.CNhs11119.1359-25C7194.44
lung, neonate N30.CNhs11133.1394-42H2219.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1381.50
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1271.41
mammary gland, adult lactating day02.CNhs10480.595-22B6222.77
mammary gland, adult pregnant day19.CNhs10476.588-5H2188.46
medulla oblongata, adult.CNhs10477.17-12C2286.74
medulla oblongata, neonate N30.CNhs11200.1396-42A3260.68
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7149.34
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2231.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1160.91
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2155.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3148.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7165.37
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8158.41
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9185.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4172.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5176.81
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6174.32
olfactory brain, adult.CNhs10489.18-22I9273.77
ovary, adult.CNhs10507.91-2I7159.97
ovary, embryo E18.CNhs11040.505-44H7111.83
ovary, neonate N00.CNhs11217.1299-22I4109.46
oviduct, adult pregnant day01.CNhs10500.988-6G6167.28
pancreas, adult.CNhs10486.34-16E4188.50
pancreas, embryo E14.CNhs11012.405-44F478.18
pancreas, embryo E15.CNhs11042.1556-45F284.95
pancreas, embryo E16.CNhs11003.460-26E5110.15
pancreas, embryo E17.CNhs10599.1558-45G3145.29
pancreas, embryo E18.CNhs10580.1535-43I7144.19
pancreas, neonate N00.CNhs11105.645-26G9127.41
pancreas, neonate N01.CNhs11138.1531-43D7122.51
pancreas, neonate N02.CNhs11139.1539-43D8125.84
pancreas, neonate N16.CNhs11136.787-43B6138.74
pancreas, neonate N25.CNhs11094.1555-45E2129.66
pancreas, neonate N30.CNhs11182.1548-44H5159.86
pituitary gland, adult.CNhs10493.21-1G8168.52
pituitary gland, embryo E12.CNhs11018.346-16E672.56
pituitary gland, embryo E13.CNhs11009.370-44C7100.90
pituitary gland, embryo E14.CNhs11037.398-44A576.73
pituitary gland, embryo E15.CNhs10592.427-16B9111.19
pituitary gland, embryo E16.CNhs11036.449-43F6106.66
pituitary gland, embryo E17.CNhs11039.1265-44F5125.22
pituitary gland, neonate N00.CNhs11190.1308-22E992.25
placenta, adult pregnant day10.CNhs10472.539-13I7184.92
placenta, adult pregnant day17.CNhs10464.577-18G3171.16
prostate, adult.CNhs10470.859-1F8170.03
skin, adult.CNhs10492.30-1C3258.71
skin, neonate N00.CNhs11124.650-25G4185.20
skin, neonate N03.CNhs11215.662-22H3162.18
skin, neonate N06.CNhs11097.693-20I5140.86
skin, neonate N10.CNhs11108.762-6C4152.82
small intestine, neonate N16.CNhs11114.790-21I1142.24
spinal cord, adult.CNhs10505.24-13C9304.65
spleen, adult.CNhs10465.25-2G2104.57
spleen, embryo E16.CNhs11035.461-43C1101.13
spleen, embryo E18.CNhs11011.1271-21F2118.71
spleen, neonate N10.CNhs11116.752-24D190.79
spleen, neonate N20.CNhs11112.824-19H1104.02
spleen, neonate N25.CNhs11099.1354-25G387.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6119.15
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9118.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3122.03
stomach, adult.CNhs10503.33-1H6276.85
stomach, embryo E12.CNhs10588.356-43E399.96
stomach, embryo E15.CNhs10603.1252-16G8115.49
stomach, embryo E16.CNhs11022.459-17D4103.79
stomach, embryo E17.CNhs11006.1035-18D5118.97
stomach, embryo E18.CNhs10999.1286-20C6125.34
stomach, neonate N03.CNhs11193.1340-24B8139.18
stomach, neonate N07.CNhs11210.718-18A9159.52
stomach, neonate N25.CNhs11104.1355-25E4168.05
stomach, neonate N30.CNhs11134.1386-42I1149.58
submandibular gland, adult.CNhs10469.59-29C1177.08
testis, adult.CNhs10504.57-7G563.70
testis, embryo E13.CNhs11031.389-23F593.90
testis, embryo E15.CNhs11034.443-27C572.31
testis, embryo E16.CNhs11033.470-26G597.81
testis, embryo E17.CNhs11029.486-18I580.08
testis, embryo E18.CNhs11027.503-18G592.59
testis, neonate N00.CNhs11189.1300-22B7100.22
testis, neonate N07.CNhs11222.726-26I490.36
testis, neonate N10.CNhs11204.763-44D980.95
testis, neonate N20.CNhs11110.839-18H366.19
testis, neonate N30.CNhs11130.1391-42E276.04
thymus, adult.CNhs10471.38-12B5126.40
thymus, embryo E14.CNhs11041.402-44I473.39
thymus, embryo E15.CNhs11005.430-45I291.52
thymus, embryo E16.CNhs11002.456-26C592.37
thymus, embryo E17.CNhs10581.478-18C1100.61
thymus, embryo E18.CNhs10595.1273-19G4122.79
thymus, neonate N02.CNhs11181.1541-43F898.80
thymus, neonate N03.CNhs11137.2104-43C798.80
thymus, neonate N06.CNhs11197.681-26C499.45
thymus, neonate N07.CNhs11211.713-19D3102.96
thymus, neonate N10.CNhs11194.748-24E4100.22
thymus, neonate N20.CNhs11186.820-7A2111.59
thymus, neonate N25.CNhs11125.1362-25G797.66
thymus, neonate N30.CNhs11132.1393-42G2100.40
tongue, adult.CNhs10499.32-1B4176.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3103.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F789.71
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5139.18
urinary bladder, adult.CNhs10481.879-12E4240.71
uterus, adult pregnant day19.CNhs10497.590-15F5193.69
uterus, adult.CNhs10509.92-27E5157.14
vagina, adult.CNhs10502.89-27D5193.57
vesicular gland, adult.CNhs10491.51-27F8201.13
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1261.48
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2267.45
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3239.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7198.15
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4250.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5227.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6245.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7223.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8251.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9248.52
whole body, embryo E11.CNhs11014.324-5I890.40
whole body, embryo E12.CNhs10587.857-27C9124.50
whole body, embryo E13.CNhs10512.372-23H296.29
whole body, embryo E14.5.CNhs10578.420-27D2115.23
whole body, embryo E14.CNhs10519.395-14B1118.85
whole body, embryo E16.CNhs10514.453-14F2137.33
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5138.46
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5132.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5145.06
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5133.17
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5141.19
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5141.28
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5143.27
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5157.44
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5149.22
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5147.65
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5140.80
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5140.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5123.21
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5133.07
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5115.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5117.49
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5133.52
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5123.40
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5142.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5132.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5131.53
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5126.01
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5136.75
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5114.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5121.48
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5136.72
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5131.36
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5141.61
whole body, embryo E17.5.CNhs10513.490-9F9130.79
whole body, embryo E17.CNhs10517.475-3I5153.88
whole body, embryo E18.CNhs10516.493-3B3164.22
whole body, neonate N00.CNhs10525.657-19C2182.43
whole body, neonate N01.CNhs10576.659-23C6199.90
whole body, neonate N06.CNhs10515.692-21D1153.31
whole body, neonate N10.CNhs10518.761-6B4170.19





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system3.05e-1575
central nervous system3.07e-1473
ectoderm-derived structure9.69e-1495
ectoderm9.69e-1495
presumptive ectoderm9.69e-1495
anatomical conduit4.95e-11122
regional part of nervous system1.01e-1054
tube1.04e-10114
gray matter3.21e-1034
neural tube5.26e-1052
neural rod5.26e-1052
future spinal cord5.26e-1052
neural keel5.26e-1052
brain grey matter1.05e-0829
regional part of telencephalon1.05e-0829
telencephalon1.05e-0829
brain1.68e-0847
future brain1.68e-0847
adult organism4.02e-0851
regional part of brain4.81e-0846
neurectoderm2.08e-0764
neural plate2.08e-0764
presumptive neural plate2.08e-0764
ecto-epithelium2.16e-0773
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