FFCP PHASE1:Mm9::chr8:32279171..32279218,-: Difference between revisions
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{{FFCP|EntrezGene=67920|HGNC=|MCL_coexpression_id=101|UniProt=Q8BGS0|association_with_transcript=0bp_to_ENSMUST00000033983,NM_026453,uc009lji.1_5end|description=CAGE_peak_1_at_Mak16_5end|id=chr8:32279171..32279218,-|ontology_enrichment_celltype=CL:0000988!1.06e-09!32;CL:0002032!1.06e-09!32;CL:0000037!1.06e-09!32;CL:0000566!1.06e-09!32;CL:0000837!1.06e-09!32;CL:0000542!5.59e-09!13;CL:0000051!5.59e-09!13;CL:0000838!6.48e-09!12;CL:0000084!2.84e-08!11;CL:0000827!2.84e-08!11;CL:0000791!4.31e-07!9;CL:0000789!4.31e-07!9;CL:0002420!4.31e-07!9;CL:0002419!4.31e-07!9;CL:0000790!4.31e-07!9;CL:0002031!9.56e-07!25|ontology_enrichment_celltype_v019_2=CL:0000988,1.06e-09,32;CL:0002032,1.06e-09,32;CL:0000037,1.06e-09,32;CL:0000837,1.06e-09,32;CL:0000542,5.59e-09,13;CL:0000051,5.59e-09,13;CL:0000838,6.48e-09,12;CL:0000084,2.84e-08,11;CL:0000827,2.84e-08,11;CL:0000791,4.31e-07,9;CL:0000789,4.31e-07,9;CL:0002420,4.31e-07,9;CL:0002419,4.31e-07,9;CL:0000790,4.31e-07,9;CL:0002031,9.56e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.28e-09!29;UBERON:0000926!1.90e-09!193;UBERON:0004120!1.90e-09!193;UBERON:0006603!1.90e-09!193;UBERON:0000072!6.55e-09!27;UBERON:0000077!2.03e-08!97;UBERON:0001041!2.10e-08!92;UBERON:0002193!2.91e-08!48;UBERON:0001048!4.55e-08!147;UBERON:0000065!5.18e-08!41;UBERON:0001004!5.50e-08!42;UBERON:0002390!6.51e-08!45;UBERON:0003061!6.51e-08!45;UBERON:0002370!7.15e-08!23;UBERON:0000974!7.15e-08!23;UBERON:0004807!7.15e-08!23;UBERON:0005058!7.15e-08!23;UBERON:0003351!7.15e-08!23;UBERON:0009113!7.15e-08!23;UBERON:0003295!7.15e-08!23;UBERON:0009722!7.15e-08!23;UBERON:0005562!7.15e-08!23;UBERON:0007690!7.15e-08!23;UBERON:0003408!9.15e-08!24;UBERON:0006562!1.05e-07!24;UBERON:0001557!1.05e-07!24;UBERON:0001042!1.05e-07!24;UBERON:0008814!1.05e-07!24;UBERON:0009145!1.05e-07!24;UBERON:0003104!1.23e-07!131;UBERON:0009142!1.23e-07!131;UBERON:0005057!3.30e-07!51;UBERON:0002405!3.91e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.28e-09,29;UBERON:0005057,1.28e-09,29;UBERON:0000072,6.55e-09,27;UBERON:0000077,2.60e-08,35;UBERON:0002193,2.91e-08,48;UBERON:0002405,2.91e-08,48;UBERON:0000065,5.18e-08,41;UBERON:0001004,5.50e-08,42;UBERON:0000153,5.59e-08,43;UBERON:0002390,6.51e-08,45;UBERON:0003061,6.51e-08,45;UBERON:0002370,7.15e-08,23;UBERON:0000974,7.15e-08,23;UBERON:0004807,7.15e-08,23;UBERON:0005058,7.15e-08,23;UBERON:0003351,7.15e-08,23;UBERON:0009113,7.15e-08,23;UBERON:0003295,7.15e-08,23;UBERON:0009722,7.15e-08,23;UBERON:0005562,7.15e-08,23;UBERON:0007690,7.15e-08,23;UBERON:0001041,8.46e-08,80;UBERON:0003408,9.15e-08,24;UBERON:0006562,1.05e-07,24;UBERON:0001557,1.05e-07,24;UBERON:0001042,1.05e-07,24;UBERON:0008814,1.05e-07,24;UBERON:0009145,1.05e-07,24;UBERON:0001048,7.19e-07,134;UBERON:0007811,9.83e-07,36|phase1_expression=20.979498970728,13.2610654902957,6.3699893514535,3.32710632437513,6.51164448930251,23.5030980676646,22.660426137766,48.1629996437079,248.210517153388,207.615234847608,183.374443969516,170.792192409015,62.3170656949589,58.6590900231473,25.3163418979904,40.2925782105754,21.6864182219725,64.3542817330805,61.9757239897939,49.6535892603695,21.6009956983717,55.5036417212949,63.2103489716224,27.9986739888462,22.2527002635155,10.3361753540704,13.7843838770904,22.8399506647042,12.5415456841207,14.8697776558359,25.7207392360153,50.8024538767705,37.5189520426588,0,33.7956395108991,28.9248282923777,26.1336776015832,14.6486070757918,23.440060335714,17.7998072951091,14.1175557127443,10.9287277593351,15.5363312969969,36.1323867589907,31.122717884391,46.0702347925821,7.04152209913235,5.88667922227206,5.93152693383074,7.58276606389705,6.99932108126813,5.75010257459886,65.6029989685749,58.7543335029189,60.1607900465011,33.1864672486372,18.6246735960192,20.6268836910977,12.3413041124355,14.8117474196169,19.6487735086916,10.5041804941431,8.89294796111139,6.74924787961049,12.8552627133707,3.5524005747305,5.69240209984969,6.14749288514487,18.456750990909,13.9056116481641,21.0324961351382,5.71301968807607,6.62605622854841,22.9057794531964,14.4726661237537,11.0306254393203,8.8092704799511,11.3641730895817,13.0565553267807,12.265424758908,12.5338071735301,18.2319679694866,8.93385596804419,10.1297269805702,10.3902808488231,10.606629077052,17.0846016958924,15.2847545576746,70.7282645731939,33.7804873677331,17.971598299504,18.0689014166091,41.4782513561728,10.7940638327563,11.695975514058,16.1289679355041,23.0328849016073,27.6097122576454,24.1600984280668,18.726997449048,20.4222958676187,8.98285341900225,2.54805239706646,0,41.3497888331419,46.8715751128932,44.4861511613009,19.8679950711164,92.9587002293346,23.1569736941127,31.5743294714367,28.6197549613413,26.2901666871907,31.0488639538402,28.8092332482477,19.729654838759,18.2924276123437,18.6533170426686,22.1152637987469,25.0738617418484,27.6051898075492,35.3958934788712,20.5030937339934,19.3235326027621,18.850203613211,21.7138496927303,49.3638312964392,44.3928020935122,55.1484785497101,17.3757141709594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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67920 | |||
|HGNC= | |||
|MCL_coexpression_id=101 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BGS0 | |||
|association_with_transcript=0bp_to_ENSMUST00000033983,NM_026453,uc009lji.1_5end | |||
|cluster_id=chr8:32279171..32279218,- | |||
|description=CAGE_peak_1_at_Mak16_5end | |||
|id=chr8:32279171..32279218,- | |||
|ontology_enrichment_celltype=CL:0000988!1.06e-09!32;CL:0002032!1.06e-09!32;CL:0000037!1.06e-09!32;CL:0000566!1.06e-09!32;CL:0000837!1.06e-09!32;CL:0000542!5.59e-09!13;CL:0000051!5.59e-09!13;CL:0000838!6.48e-09!12;CL:0000084!2.84e-08!11;CL:0000827!2.84e-08!11;CL:0000791!4.31e-07!9;CL:0000789!4.31e-07!9;CL:0002420!4.31e-07!9;CL:0002419!4.31e-07!9;CL:0000790!4.31e-07!9;CL:0002031!9.56e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.06e-09,32;CL:0002032,1.06e-09,32;CL:0000037,1.06e-09,32;CL:0000837,1.06e-09,32;CL:0000542,5.59e-09,13;CL:0000051,5.59e-09,13;CL:0000838,6.48e-09,12;CL:0000084,2.84e-08,11;CL:0000827,2.84e-08,11;CL:0000791,4.31e-07,9;CL:0000789,4.31e-07,9;CL:0002420,4.31e-07,9;CL:0002419,4.31e-07,9;CL:0000790,4.31e-07,9;CL:0002031,9.56e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.28e-09!29;UBERON:0000926!1.90e-09!193;UBERON:0004120!1.90e-09!193;UBERON:0006603!1.90e-09!193;UBERON:0000072!6.55e-09!27;UBERON:0000077!2.03e-08!97;UBERON:0001041!2.10e-08!92;UBERON:0002193!2.91e-08!48;UBERON:0001048!4.55e-08!147;UBERON:0000065!5.18e-08!41;UBERON:0001004!5.50e-08!42;UBERON:0002390!6.51e-08!45;UBERON:0003061!6.51e-08!45;UBERON:0002370!7.15e-08!23;UBERON:0000974!7.15e-08!23;UBERON:0004807!7.15e-08!23;UBERON:0005058!7.15e-08!23;UBERON:0003351!7.15e-08!23;UBERON:0009113!7.15e-08!23;UBERON:0003295!7.15e-08!23;UBERON:0009722!7.15e-08!23;UBERON:0005562!7.15e-08!23;UBERON:0007690!7.15e-08!23;UBERON:0003408!9.15e-08!24;UBERON:0006562!1.05e-07!24;UBERON:0001557!1.05e-07!24;UBERON:0001042!1.05e-07!24;UBERON:0008814!1.05e-07!24;UBERON:0009145!1.05e-07!24;UBERON:0003104!1.23e-07!131;UBERON:0009142!1.23e-07!131;UBERON:0005057!3.30e-07!51;UBERON:0002405!3.91e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.28e-09,29;UBERON:0005057,1.28e-09,29;UBERON:0000072,6.55e-09,27;UBERON:0000077,2.60e-08,35;UBERON:0002193,2.91e-08,48;UBERON:0002405,2.91e-08,48;UBERON:0000065,5.18e-08,41;UBERON:0001004,5.50e-08,42;UBERON:0000153,5.59e-08,43;UBERON:0002390,6.51e-08,45;UBERON:0003061,6.51e-08,45;UBERON:0002370,7.15e-08,23;UBERON:0000974,7.15e-08,23;UBERON:0004807,7.15e-08,23;UBERON:0005058,7.15e-08,23;UBERON:0003351,7.15e-08,23;UBERON:0009113,7.15e-08,23;UBERON:0003295,7.15e-08,23;UBERON:0009722,7.15e-08,23;UBERON:0005562,7.15e-08,23;UBERON:0007690,7.15e-08,23;UBERON:0001041,8.46e-08,80;UBERON:0003408,9.15e-08,24;UBERON:0006562,1.05e-07,24;UBERON:0001557,1.05e-07,24;UBERON:0001042,1.05e-07,24;UBERON:0008814,1.05e-07,24;UBERON:0009145,1.05e-07,24;UBERON:0001048,7.19e-07,134;UBERON:0007811,9.83e-07,36 | |||
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| |||
|short_description=p1@Mak16 | |||
}} |
Revision as of 08:03, 6 August 2015
Short description: | p1@Mak16 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mak16_5end |
Coexpression cluster: | MCL_coexpression_mm9:101 |
Association with transcript: | 0bp_to_ENSMUST00000033983, NM_026453, uc009lji.1_5end |
EntrezGene: | 67920 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.06e-09 | 32 |
hematopoietic oligopotent progenitor cell | 1.06e-09 | 32 |
hematopoietic stem cell | 1.06e-09 | 32 |
hematopoietic multipotent progenitor cell | 1.06e-09 | 32 |
lymphocyte | 5.59e-09 | 13 |
common lymphoid progenitor | 5.59e-09 | 13 |
lymphoid lineage restricted progenitor cell | 6.48e-09 | 12 |
T cell | 2.84e-08 | 11 |
pro-T cell | 2.84e-08 | 11 |
mature alpha-beta T cell | 4.31e-07 | 9 |
alpha-beta T cell | 4.31e-07 | 9 |
immature T cell | 4.31e-07 | 9 |
mature T cell | 4.31e-07 | 9 |
immature alpha-beta T cell | 4.31e-07 | 9 |
hematopoietic lineage restricted progenitor cell | 9.56e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.28e-09 | 29 |
immune organ | 1.28e-09 | 29 |
segment of respiratory tract | 6.55e-09 | 27 |
mixed endoderm/mesoderm-derived structure | 2.60e-08 | 35 |
hemolymphoid system | 2.91e-08 | 48 |
immune system | 2.91e-08 | 48 |
respiratory tract | 5.18e-08 | 41 |
respiratory system | 5.50e-08 | 42 |
anterior region of body | 5.59e-08 | 43 |
hematopoietic system | 6.51e-08 | 45 |
blood island | 6.51e-08 | 45 |
thymus | 7.15e-08 | 23 |
neck | 7.15e-08 | 23 |
respiratory system epithelium | 7.15e-08 | 23 |
hemolymphoid system gland | 7.15e-08 | 23 |
pharyngeal epithelium | 7.15e-08 | 23 |
thymic region | 7.15e-08 | 23 |
pharyngeal gland | 7.15e-08 | 23 |
entire pharyngeal arch endoderm | 7.15e-08 | 23 |
thymus primordium | 7.15e-08 | 23 |
early pharyngeal endoderm | 7.15e-08 | 23 |
foregut | 8.46e-08 | 80 |
gland of gut | 9.15e-08 | 24 |
pharynx | 1.05e-07 | 24 |
upper respiratory tract | 1.05e-07 | 24 |
chordate pharynx | 1.05e-07 | 24 |
pharyngeal arch system | 1.05e-07 | 24 |
pharyngeal region of foregut | 1.05e-07 | 24 |
primordium | 7.19e-07 | 134 |
craniocervical region | 9.83e-07 | 36 |