FFCP PHASE1:Mm9::chr16:37883820..37883847,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr16:37883820..37883847,+ to FFCP PHASE1:Mm9::chr16:37883820..37883847,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=831 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:37883820..37883847,+ | |||
|description=CAGE_peak_at_chr16:37883820..37883847,+ | |||
|id=chr16:37883820..37883847,+ | |||
|ontology_enrichment_celltype=CL:0000063!5.53e-22!66;CL:0000144!1.07e-18!121;CL:0000012!1.07e-18!121;CL:0002371!2.09e-17!118;CL:0000548!8.69e-16!115;CL:0000004!8.69e-16!115;CL:0000255!8.69e-16!115;CL:0002320!7.17e-12!46;CL:0000134!7.17e-12!46;CL:0000034!1.65e-11!97;CL:0000988!3.70e-11!32;CL:0002032!3.70e-11!32;CL:0000037!3.70e-11!32;CL:0000566!3.70e-11!32;CL:0000837!3.70e-11!32;CL:0000219!1.10e-10!54;CL:0002031!3.43e-10!25;CL:0000066!7.10e-10!25;CL:0000723!2.52e-09!91;CL:0000048!2.52e-09!91;CL:0002076!8.75e-09!15;CL:0000738!2.73e-08!17;CL:0002087!2.73e-08!17;CL:0000223!7.50e-08!20;CL:0000838!4.90e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,2.22e-15,46;CL:0000134,2.22e-15,46;CL:0000034,1.40e-14,97;CL:0000988,1.07e-13,32;CL:0002032,1.07e-13,32;CL:0000037,1.07e-13,32;CL:0000837,1.07e-13,32;CL:0000219,2.59e-13,54;CL:0002031,7.27e-13,25;CL:0000066,8.23e-13,25;CL:0000723,1.08e-11,91;CL:0000048,1.08e-11,91;CL:0002076,3.51e-11,15;CL:0000223,4.08e-10,20;CL:0000738,1.67e-09,17;CL:0002087,1.67e-09,17;CL:0000838,6.03e-08,12;CL:0000049,6.41e-08,19;CL:0000791,1.20e-07,9;CL:0000789,1.20e-07,9;CL:0002420,1.20e-07,9;CL:0002419,1.20e-07,9;CL:0000790,1.20e-07,9;CL:0000084,3.60e-07,11;CL:0000827,3.60e-07,11;CL:0000542,5.17e-07,13;CL:0000051,5.17e-07,13;CL:0000624,5.44e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!7.17e-12!46;UBERON:0002193!1.46e-08!48;UBERON:0002390!5.51e-08!45;UBERON:0003061!5.51e-08!45;UBERON:0000344!6.03e-08!15;UBERON:0000490!4.22e-07!66;UBERON:0002204!6.23e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.22e-15,46;UBERON:0000344,4.56e-10,15;UBERON:0001242,2.25e-08,13;UBERON:0001262,2.25e-08,13;UBERON:0004786,2.25e-08,13;UBERON:0002193,2.99e-08,48;UBERON:0002405,2.99e-08,48;UBERON:0002371,1.87e-07,16;UBERON:0002390,1.93e-07,45;UBERON:0003061,1.93e-07,45;UBERON:0002204,2.74e-07,32;UBERON:0000485,2.91e-07,11;UBERON:0000490,3.70e-07,66 | |||
|phase1_expression=24.9832201483479,41.8770489167233,66.4298889508723,102.837831844322,173.309922561436,23.8388566114883,116.806320297763,185.16284581522,130.651934156747,58.9842606331424,162.999505750681,88.3875521668327,228.210572998297,226.156581057946,0.333109761815663,83.0148596298286,67.8575021784302,262.464521578054,159.875429584291,139.199805789754,0.850432901510698,0.992909512008853,96.905121770545,307.025459340547,378.066495198696,99.3421297918985,62.4604894430658,68.3043807614268,420.521827256955,78.6334004850984,71.8406854523187,15.2407361630311,0,15.8481681015439,20.2196133825892,32.9144597809815,22.8669679013853,200.476651122979,158.611074938331,154.963028216244,153.528418376095,187.837508363573,163.131478618468,0.503587271902309,0.912392380975631,2.75320128242522,0.782391344348039,0.65407546914134,0.878744730937887,0,0.419959264876088,0,207.54708369342,79.7898356212479,112.255328913583,2.57259436035947,1.14613375975503,3.09403255366465,0.809265843438391,1.05798195854407,0,1.0165335962074,0,8.99899717281399,3.9554654502679,7.104801149461,5.09320187881288,5.37905627450176,1.97010263386108,1.4850653216486,2.3135745748652,1.71390590642282,0.883474163806454,0.61245399607477,0.287536413054709,0.919218786610021,0,0.383062014255563,0.307213066512487,1.05509030184155,0.0914876436024097,1.04182674111352,0.279182999001381,1.12552522006336,0.763991238884051,2.06240009831567,0.854230084794618,0.559198337475902,218.470067766236,202.758495766506,109.568776729234,43.0211938490693,1.3599426674155,1.61910957491345,0.649776417447669,0,0.280888840263504,0.340860645156116,306.027913422179,251.577777051362,28.1686839553361,151.425243348895,112.114305470924,291.537348292866,443.590143031978,465.675432743231,405.430604901856,0.5709193985953,0.258937883647172,0.445326417194474,0.867426633830679,0.304465478312141,0.691846491768175,0.150722640552623,1.41106448562846,1.63366568728578,1.23597483867187,0.144599356919912,0,0.970601099684455,0.662524555381181,0.969750506270444,0,0,0,0.766371165625774,76.8014948082949,15.5974710058286,82.3415071433459,0.299581278809645,0,2.1361239859187,0.173824320192276,0.511430914660661,0.20778804455956,0.162241263067758,1.32391173005411,1.49288364732112,0,1.05220927943237,0,0,0.360124259610698,0.150704817835715,0.680364991513279,0.384341160854549,1.03071897015702,0.517406741478031,0,0.378212160335639,0.175951124163949,1.31517439456545,0,0.696504333044333,0,0.199034266818493,4.21327912387941,10.808612098818,0.568326998791185,0.207125772535502,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0.465067889500816,0.268273401399619,0.467061369468678,0.658239399653922,0.656669856316381,0.405344047729279,0.292399974850665,0.439100230582101,0.402619256281115,0.210289948564127,2.26390147234426,1.32167513193519,1.85115396664481,0.426576501070468,0,0.257734922644187,0.605050573870028,0.22237804384487,0,4.2707615539006,2.14108641141214,1.50801125280162,0.795825888164603,1.36474860983384,1.79763881730844,2.59365659849633,0.398282546508734,1.32767530667157,0.799739588268102,0,0,0.581857461502877,0.771494018793504,0.758838445491087,0.885660887877613,0.784993639206874,0.863780147452604,0.296452627087149,0.667380422864376,0.196558995113203,0.224862112384854,0.405720242777006,0,0,1.15078454980324,0.972811360650212,1.37280706594041,0,0.372140947668503,2.18426371180192,0.757736633841335,1.4351793081753,0.964887042726734,1.29327233116623,0,0.325929952884052,0.339490171550376,0.234690248288502,0.502518772325447,0.476087281772027,1.56106918286239,0.157635144106191,1.55025282754142,2.87018583583477,1.3109065177259,0.863424909329478,2.4590339958857,450.865938978424,1815.55717258685,1.47529281905711,0.551873492609465,0,0.703270119553219,2.45902418065013,0,0.315508219416257,0,0,0.238968797952552,0.445597348164788,1.13230612315533,0,0.292255857911312,0,0.642642632843614,0.283880170416537,0.890328018336276,0.488660878060728,0.164970122972535,0,0.971122544619926,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0.775284879504663,0.363533729477506,0,0.632073515871632,0,1.03135543248187,0.340439605753788,0.36012218806262,1.03486947026204,0.428674070063185,0.709360934569094,0.356737635204141,0,0.304464949114599,0.23467170806371,1.27099242518292,0,0.32977250588296,0.322928853391811,1.62844897306021,1.43246812803764,0.984845398470368,2.91480836629851,0.370850604021019,0.341741761595705,0.619160603889667,0.555583582109135,0.376736914009382,0.410082683163076,2.0590035588587,31.2760311188694,31.6290282251467,32.615193817844,0.954670618015114,0.949007980743406,0.609958401380546,0,1.25452977608681,0.436725127492355,2.29269388854195,1.65306911450672,0.785267825952089,1.16653475962614,0.621339313086926,0,0.299033092087958,0,0.388902376688095,0.774958940866387,0.168956125490778,0.938857909166032,0.781226309063701,0.629156066554265,0.483168241652012,0.864090018773596,0,0.405450430580328,0.821687657318618,1.03936658382236,0.537080087002444,0.596044064343795,2.64429988943931,0.886137163047463,2.01932899896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| |phase1_expression=24.9832201483479,41.8770489167233,66.4298889508723,102.837831844322,173.309922561436,23.8388566114883,116.806320297763,185.16284581522,130.651934156747,58.9842606331424,162.999505750681,88.3875521668327,228.210572998297,226.156581057946,0.333109761815663,83.0148596298286,67.8575021784302,262.464521578054,159.875429584291,139.199805789754,0.850432901510698,0.992909512008853,96.905121770545,307.025459340547,378.066495198696,99.3421297918985,62.4604894430658,68.3043807614268,420.521827256955,78.6334004850984,71.8406854523187,15.2407361630311,0,15.8481681015439,20.2196133825892,32.9144597809815,22.8669679013853,200.476651122979,158.611074938331,154.963028216244,153.528418376095,187.837508363573,163.131478618468,0.503587271902309,0.912392380975631,2.75320128242522,0.782391344348039,0.65407546914134,0.878744730937887,0,0.419959264876088,0,207.54708369342,79.7898356212479,112.255328913583,2.57259436035947,1.14613375975503,3.09403255366465,0.809265843438391,1.05798195854407,0,1.0165335962074,0,8.99899717281399,3.9554654502679,7.104801149461,5.09320187881288,5.37905627450176,1.97010263386108,1.4850653216486,2.3135745748652,1.71390590642282,0.883474163806454,0.61245399607477,0.287536413054709,0.919218786610021,0,0.383062014255563,0.307213066512487,1.05509030184155,0.0914876436024097,1.04182674111352,0.279182999001381,1.12552522006336,0.763991238884051,2.06240009831567,0.854230084794618,0.559198337475902,218.470067766236,202.758495766506,109.568776729234,43.0211938490693,1.3599426674155,1.61910957491345,0.649776417447669,0,0.280888840263504,0.340860645156116,306.027913422179,251.577777051362,28.1686839553361,151.425243348895,112.114305470924,291.537348292866,443.590143031978,465.675432743231,405.430604901856,0.5709193985953,0.258937883647172,0.445326417194474,0.867426633830679,0.304465478312141,0.691846491768175,0.150722640552623,1.41106448562846,1.63366568728578,1.23597483867187,0.144599356919912,0,0.970601099684455,0.662524555381181,0.969750506270444,0,0,0,0.766371165625774,76.8014948082949,15.5974710058286,82.3415071433459,0.299581278809645,0,2.1361239859187,0.173824320192276,0.511430914660661,0.20778804455956,0.162241263067758,1.32391173005411,1.49288364732112,0,1.05220927943237,0,0,0.360124259610698,0.150704817835715,0.680364991513279,0.384341160854549,1.03071897015702,0.517406741478031,0,0.378212160335639,0.175951124163949,1.31517439456545,0,0.696504333044333,0,0.199034266818493,4.21327912387941,10.808612098818,0.568326998791185,0.207125772535502,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0.465067889500816,0.268273401399619,0.467061369468678,0.658239399653922,0.656669856316381,0.405344047729279,0.292399974850665,0.439100230582101,0.402619256281115,0.210289948564127,2.26390147234426,1.32167513193519,1.85115396664481,0.426576501070468,0,0.257734922644187,0.605050573870028,0.22237804384487,0,4.2707615539006,2.14108641141214,1.50801125280162,0.795825888164603,1.36474860983384,1.79763881730844,2.59365659849633,0.398282546508734,1.32767530667157,0.799739588268102,0,0,0.581857461502877,0.771494018793504,0.758838445491087,0.885660887877613,0.784993639206874,0.863780147452604,0.296452627087149,0.667380422864376,0.196558995113203,0.224862112384854,0.405720242777006,0,0,1.15078454980324,0.972811360650212,1.37280706594041,0,0.372140947668503,2.18426371180192,0.757736633841335,1.4351793081753,0.964887042726734,1.29327233116623,0,0.325929952884052,0.339490171550376,0.234690248288502,0.502518772325447,0.476087281772027,1.56106918286239,0.157635144106191,1.55025282754142,2.87018583583477,1.3109065177259,0.863424909329478,2.4590339958857,450.865938978424,1815.55717258685,1.47529281905711,0.551873492609465,0,0.703270119553219,2.45902418065013,0,0.315508219416257,0,0,0.238968797952552,0.445597348164788,1.13230612315533,0,0.292255857911312,0,0.642642632843614,0.283880170416537,0.890328018336276,0.488660878060728,0.164970122972535,0,0.971122544619926,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0.775284879504663,0.363533729477506,0,0.632073515871632,0,1.03135543248187,0.340439605753788,0.36012218806262,1.03486947026204,0.428674070063185,0.709360934569094,0.356737635204141,0,0.304464949114599,0.23467170806371,1.27099242518292,0,0.32977250588296,0.322928853391811,1.62844897306021,1.43246812803764,0.984845398470368,2.91480836629851,0.370850604021019,0.341741761595705,0.619160603889667,0.555583582109135,0.376736914009382,0.410082683163076,2.0590035588587,31.2760311188694,31.6290282251467,32.615193817844,0.954670618015114,0.949007980743406,0.609958401380546,0,1.25452977608681,0.436725127492355,2.29269388854195,1.65306911450672,0.785267825952089,1.16653475962614,0.621339313086926,0,0.299033092087958,0,0.388902376688095,0.774958940866387,0.168956125490778,0.938857909166032,0.781226309063701,0.629156066554265,0.483168241652012,0.864090018773596,0,0.405450430580328,0.821687657318618,1.03936658382236,0.537080087002444,0.596044064343795,2.64429988943931,0.886137163047463,2.01932899896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| ||
|short_description=p@chr16:37883820..37883847,+ | |||
}} | }} |
Latest revision as of 10:14, 6 August 2015
Short description: | p@chr16:37883820..37883847, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:37883820..37883847, + |
Coexpression cluster: | MCL_coexpression_mm9:831 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 2.22e-15 | 46 |
mesenchymal cell | 2.22e-15 | 46 |
stem cell | 1.40e-14 | 97 |
hematopoietic cell | 1.07e-13 | 32 |
hematopoietic oligopotent progenitor cell | 1.07e-13 | 32 |
hematopoietic stem cell | 1.07e-13 | 32 |
hematopoietic multipotent progenitor cell | 1.07e-13 | 32 |
motile cell | 2.59e-13 | 54 |
hematopoietic lineage restricted progenitor cell | 7.27e-13 | 25 |
epithelial cell | 8.23e-13 | 25 |
somatic stem cell | 1.08e-11 | 91 |
multi fate stem cell | 1.08e-11 | 91 |
endo-epithelial cell | 3.51e-11 | 15 |
endodermal cell | 4.08e-10 | 20 |
leukocyte | 1.67e-09 | 17 |
nongranular leukocyte | 1.67e-09 | 17 |
lymphoid lineage restricted progenitor cell | 6.03e-08 | 12 |
common myeloid progenitor | 6.41e-08 | 19 |
mature alpha-beta T cell | 1.20e-07 | 9 |
alpha-beta T cell | 1.20e-07 | 9 |
immature T cell | 1.20e-07 | 9 |
mature T cell | 1.20e-07 | 9 |
immature alpha-beta T cell | 1.20e-07 | 9 |
T cell | 3.60e-07 | 11 |
pro-T cell | 3.60e-07 | 11 |
lymphocyte | 5.17e-07 | 13 |
common lymphoid progenitor | 5.17e-07 | 13 |
CD4-positive, alpha-beta T cell | 5.44e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.22e-15 | 46 |
mucosa | 4.56e-10 | 15 |
intestinal mucosa | 2.25e-08 | 13 |
wall of intestine | 2.25e-08 | 13 |
gastrointestinal system mucosa | 2.25e-08 | 13 |
hemolymphoid system | 2.99e-08 | 48 |
immune system | 2.99e-08 | 48 |
bone marrow | 1.87e-07 | 16 |
hematopoietic system | 1.93e-07 | 45 |
blood island | 1.93e-07 | 45 |
musculoskeletal system | 2.74e-07 | 32 |
simple columnar epithelium | 2.91e-07 | 11 |
unilaminar epithelium | 3.70e-07 | 66 |