FFCP PHASE1:Hg19::chr17:46919030..46919058,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:46919030..46919058,+ to FFCP PHASE1:Hg19::chr17:46919030..46919058,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10241 | |EntrezGene=10241 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29912 | |HGNC=29912 | ||
|TSSclassifier=strong | |||
|UniProt=D6RF70 | |UniProt=D6RF70 | ||
|association_with_transcript=105bp_to_ENST00000502761_5end | |||
|cluster_id=chr17:46919030..46919058,+ | |||
|coexpression_cluster_id=C3649 | |||
|description=CAGE_peak_2_at_CALCOCO2_5end | |||
|id=chr17:46919030..46919058,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.80e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;6.13e-12;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.69e-10,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.18e-42!115;UBERON:0002616!9.45e-17!59;UBERON:0005743!1.64e-16!86;UBERON:0001049!9.59e-16!57;UBERON:0005068!9.59e-16!57;UBERON:0006241!9.59e-16!57;UBERON:0007135!9.59e-16!57;UBERON:0003075!4.91e-15!86;UBERON:0007284!4.91e-15!86;UBERON:0000955!8.31e-15!69;UBERON:0006238!8.31e-15!69;UBERON:0000073!1.27e-14!94;UBERON:0001016!1.27e-14!94;UBERON:0001017!1.78e-14!82;UBERON:0002346!4.43e-14!90;UBERON:0000153!1.64e-11!129;UBERON:0007811!1.64e-11!129;UBERON:0003080!2.52e-11!42;UBERON:0000475!4.88e-11!365;UBERON:0000033!8.06e-11!123;UBERON:0002780!1.32e-10!41;UBERON:0001890!1.32e-10!41;UBERON:0006240!1.32e-10!41;UBERON:0000477!4.66e-10!286;UBERON:0003056!2.85e-09!61;UBERON:0004111!3.66e-09!241;UBERON:0002020!5.59e-09!34;UBERON:0003528!5.59e-09!34;UBERON:0001893!7.74e-09!34;UBERON:0004121!1.37e-08!169;UBERON:0002791!1.65e-08!33;UBERON:0000924!3.17e-08!173;UBERON:0006601!3.17e-08!173;UBERON:0001869!5.57e-08!32;UBERON:0000481!6.38e-08!347;UBERON:0000025!7.59e-08!194;UBERON:0000119!2.77e-07!312;UBERON:0002298!5.94e-07!8;UBERON:0000483!8.32e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.64e-11;114!UBERON:0007100;9.25e-08;25!UBERON:0003688;2.02e-07;6!UBERON:0002358;2.02e-07;6!UBERON:0003684;2.02e-07;6!UBERON:0001178;2.02e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.87e-44,114;UBERON:0003075,1.00e-10,82;UBERON:0007284,1.00e-10,82;UBERON:0002346,7.89e-10,86;UBERON:0010314,1.05e-09,132;UBERON:0001017,3.88e-09,81;UBERON:0000955,1.02e-08,68;UBERON:0006238,1.02e-08,68;UBERON:0001049,1.30e-08,56;UBERON:0005068,1.30e-08,56;UBERON:0006241,1.30e-08,56;UBERON:0007135,1.30e-08,56;UBERON:0001016,2.82e-08,89;UBERON:0010371,3.71e-08,104;UBERON:0007100,4.12e-08,27;UBERON:0000073,1.57e-07,53;UBERON:0002616,1.57e-07,53;UBERON:0003688,2.74e-07,6;UBERON:0002358,2.74e-07,6;UBERON:0003684,2.74e-07,6;UBERON:0001178,2.74e-07,6 | |||
|phase1_expression=23.7998676844429,19.4831476740795,15.2230756423649,18.0131937035635,26.8176656656373,20.9361245784089,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,1.11957737119962,0.647787332037959,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.91793842765295,0,1.00267582127178,0.144846518960824,0,0,0,0,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0.71153252537342,0.66944122552934,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.357198913136319,1.57170560838319,0.225222960966644,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0.560677600142307,0,0,1.8672662123986,0.808264032418128,2.12500474047496,1.05950199351452,1.72852777344,0,0,0,0.597794722207204,0.117434498643765,0,0,0,0,0.206651562351531,0,0.741800787835671,0,0,0,0,0.831192346452549,0,0,0,1.13432183160021,0,0,0,0,0.103052529238439,0,0.37223371266318,0,0.0974370051611986,0,0.184099797284599,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,4.64367928031979,5.77503585335668,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0.4115740113314,0,0,0,1.77236972004421,0,0.245976877086227,1.3725424823882,0,0,0,0,0,0,0,0,0.939269553886573,0.721832238805369,1.38895653772983,1.33177906564219,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.336393253036082,0.43596006883328,0.2933531432838,0,7.15312891703765,1.690605505112,0,1.04007436911366,0,0,0,4.14636181608628,0.542621605391443,0,0.65147236858747,1.42156779497018,0.791951872933429,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,0,0,4.34343920002738,1.2328579353023,1.79060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,2.49565033836969,1.24900292158013,1.73472656537328,0.585707074963566,2.40756879782175,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0.106727557803444,0,0,0,2.48107807818777,5.52463103837025,4.2099014164961,1.02511319404561,6.65219423786715,0.965123526861645,8.90508398669946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,2.29610251989794,9.43597344526479,13.0862084792607,0,0,0,0,1.6068392984416,0,0.308097234229289,0.307007349452259,0,1.28904293841928,0.145016693914229,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0.744316738719335,1.2655176988749,2.85945290885737,0,0.855877976067841,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0.409499734223957,0,0,0,0,0.438450885253763,0,0.655894752046633,0,0,0,0.143411352204052,1.3754865741837,0,0,0,0,0,0,0,0,0,13.0859883079723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0.383010740264733,0,0,0,0.456469358066384,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,22.2692432493279,0,0,0,0.23874448473769,0,0,0,2.2507106625682,0.111308705022906,0,0,2.39097585901284,0.552567831062295,0,0.102268682502155,0,0.933118762985422,0,0,0,2.86065876347107,0,3.33410970433911,1.93866549219044,2.41197055220813,0,0,0,18.8499889613046,0,0,0,0,0,0,4.42870692906919,3.49729672013683,0,0.884634079449797,1.47773809476774,1.31631238292384,0.21787692703798,0,5.07871706125061,0.455768223388005,0,0,0,0,0.549585560411174,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0.995261931078505,4.24596309616028,3.05515072466813,0,0,0,0.606610196826093,0,1.87411556580271,0,0,0,2.36750641709634,1.20990716048664,0,2.14834370736859,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,1.57254001417827,0,0,0,0,4.36450574197887,0,8.3612874088797,0,0,0.886351143382302,0,0.0801588202515337,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,2.0535806833799,1.27746588066972,0,0,6.42349522926185,3.89572720819862,10.7680953686522,2.1964690054889,4.72148652950228,5.35611497860494,4.83721001904429,0.720599767084807,0,0,0,0,0.0984274815147488,0.338693328263138,2.38568906942791,2.58786471611994,0,0,0,0,0,0.485996453264197,0,5.43759380364467,1.73100140845494,0,0,0,1.42939065274673,3.97255182219259,0,0,0,0,0,0,0,0,1.17241786942466,1.32506888912221,0.517131825446202,1.58679122091228,0,0,5.76652027865551,2.67247318669432,6.21358583020793,2.48083010905975,0,0,0,1.08803560673895,3.5096585163178,2.45076461410769,3.27872630709804,0,0,0.976210119215705,2.754200475543,6.30750115259078,6.87760119528484,3.10482014706917,0.276697269872462,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0.449803112163605,0,0,0,3.1304703708704,0,0,0,0,0,0,2.3885753321917,3.60024988196838,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0.168942440653073,0,0,0.303859956177382,0.553033744606923,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0.306245477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|phase1_expression=23.7998676844429,19.4831476740795,15.2230756423649,18.0131937035635,26.8176656656373,20.9361245784089,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,1.11957737119962,0.647787332037959,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.91793842765295,0,1.00267582127178,0.144846518960824,0,0,0,0,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0.71153252537342,0.66944122552934,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.357198913136319,1.57170560838319,0.225222960966644,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0.560677600142307,0,0,1.8672662123986,0.808264032418128,2.12500474047496,1.05950199351452,1.72852777344,0,0,0,0.597794722207204,0.117434498643765,0,0,0,0,0.206651562351531,0,0.741800787835671,0,0,0,0,0.831192346452549,0,0,0,1.13432183160021,0,0,0,0,0.103052529238439,0,0.37223371266318,0,0.0974370051611986,0,0.184099797284599,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,4.64367928031979,5.77503585335668,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0.4115740113314,0,0,0,1.77236972004421,0,0.245976877086227,1.3725424823882,0,0,0,0,0,0,0,0,0.939269553886573,0.721832238805369,1.38895653772983,1.33177906564219,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.336393253036082,0.43596006883328,0.2933531432838,0,7.15312891703765,1.690605505112,0,1.04007436911366,0,0,0,4.14636181608628,0.542621605391443,0,0.65147236858747,1.42156779497018,0.791951872933429,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,0,0,4.34343920002738,1.2328579353023,1.79060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,2.49565033836969,1.24900292158013,1.73472656537328,0.585707074963566,2.40756879782175,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0.106727557803444,0,0,0,2.48107807818777,5.52463103837025,4.2099014164961,1.02511319404561,6.65219423786715,0.965123526861645,8.90508398669946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,2.29610251989794,9.43597344526479,13.0862084792607,0,0,0,0,1.6068392984416,0,0.308097234229289,0.307007349452259,0,1.28904293841928,0.145016693914229,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0.744316738719335,1.2655176988749,2.85945290885737,0,0.855877976067841,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0.409499734223957,0,0,0,0,0.438450885253763,0,0.655894752046633,0,0,0,0.143411352204052,1.3754865741837,0,0,0,0,0,0,0,0,0,13.0859883079723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0.383010740264733,0,0,0,0.456469358066384,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,22.2692432493279,0,0,0,0.23874448473769,0,0,0,2.2507106625682,0.111308705022906,0,0,2.39097585901284,0.552567831062295,0,0.102268682502155,0,0.933118762985422,0,0,0,2.86065876347107,0,3.33410970433911,1.93866549219044,2.41197055220813,0,0,0,18.8499889613046,0,0,0,0,0,0,4.42870692906919,3.49729672013683,0,0.884634079449797,1.47773809476774,1.31631238292384,0.21787692703798,0,5.07871706125061,0.455768223388005,0,0,0,0,0.549585560411174,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0.995261931078505,4.24596309616028,3.05515072466813,0,0,0,0.606610196826093,0,1.87411556580271,0,0,0,2.36750641709634,1.20990716048664,0,2.14834370736859,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,1.57254001417827,0,0,0,0,4.36450574197887,0,8.3612874088797,0,0,0.886351143382302,0,0.0801588202515337,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,2.0535806833799,1.27746588066972,0,0,6.42349522926185,3.89572720819862,10.7680953686522,2.1964690054889,4.72148652950228,5.35611497860494,4.83721001904429,0.720599767084807,0,0,0,0,0.0984274815147488,0.338693328263138,2.38568906942791,2.58786471611994,0,0,0,0,0,0.485996453264197,0,5.43759380364467,1.73100140845494,0,0,0,1.42939065274673,3.97255182219259,0,0,0,0,0,0,0,0,1.17241786942466,1.32506888912221,0.517131825446202,1.58679122091228,0,0,5.76652027865551,2.67247318669432,6.21358583020793,2.48083010905975,0,0,0,1.08803560673895,3.5096585163178,2.45076461410769,3.27872630709804,0,0,0.976210119215705,2.754200475543,6.30750115259078,6.87760119528484,3.10482014706917,0.276697269872462,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0.449803112163605,0,0,0,3.1304703708704,0,0,0,0,0,0,2.3885753321917,3.60024988196838,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0.168942440653073,0,0,0.303859956177382,0.553033744606923,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0.306245477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| ||
|short_description=p2@CALCOCO2 | |||
}} | }} |
Latest revision as of 18:21, 15 September 2015
Short description: | p2@CALCOCO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CALCOCO2_5end |
Coexpression cluster: | C3649_vagina_Adipocyte_adipose_breast_skeletal_heart_Retinal |
Association with transcript: | 105bp_to_ENST00000502761_5end |
EntrezGene: | CALCOCO2 |
HGNC: | 29912 |
UniProt: | D6RF70 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.69e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.87e-44 | 114 |
neural plate | 1.00e-10 | 82 |
presumptive neural plate | 1.00e-10 | 82 |
neurectoderm | 7.89e-10 | 86 |
structure with developmental contribution from neural crest | 1.05e-09 | 132 |
central nervous system | 3.88e-09 | 81 |
brain | 1.02e-08 | 68 |
future brain | 1.02e-08 | 68 |
neural tube | 1.30e-08 | 56 |
neural rod | 1.30e-08 | 56 |
future spinal cord | 1.30e-08 | 56 |
neural keel | 1.30e-08 | 56 |
nervous system | 2.82e-08 | 89 |
ecto-epithelium | 3.71e-08 | 104 |
primary circulatory organ | 4.12e-08 | 27 |
regional part of nervous system | 1.57e-07 | 53 |
regional part of brain | 1.57e-07 | 53 |
omentum | 2.74e-07 | 6 |
peritoneum | 2.74e-07 | 6 |
abdominal cavity | 2.74e-07 | 6 |
visceral peritoneum | 2.74e-07 | 6 |