FFCP PHASE1:Hg19::chr20:34205592..34205613,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:34205592..34205613,+ to FFCP PHASE1:Hg19::chr20:34205592..34205613,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6676 | |EntrezGene=6676 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11214 | |HGNC=11214 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000498203_5end | |||
|cluster_id=chr20:34205592..34205613,+ | |||
|description=CAGE_peak_3_at_SPAG4_5end | |||
|id=chr20:34205592..34205613,+ | |||
|ontology_enrichment_celltype=CL:0000359!1.09e-10!32;CL:0000192!2.70e-08!42;CL:0000514!2.70e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.10e-16;32!CL:0000192;1.55e-10;43!CL:0002539;1.12e-07;10!CL:0000187;3.29e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.60e-17,32;CL:0000192,6.03e-13,43;CL:0000514,6.03e-13,43;CL:0000187,1.87e-10,55;CL:0000680,1.16e-09,58;CL:0000056,1.16e-09,58;CL:0000355,1.16e-09,58;CL:0000393,5.92e-09,61;CL:0000211,5.92e-09,61;CL:0002539,9.37e-08,10;CL:0000222,2.20e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.55e-10;43!UBERON:0004161;6.98e-10;11!UBERON:0009497;3.55e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!2.53e-14!42;UBERON:0003509!2.53e-14!42;UBERON:0004572!2.53e-14!42;UBERON:0000055!9.55e-12!69;UBERON:0002049!3.06e-11!79;UBERON:0007798!3.06e-11!79;UBERON:0001981!1.05e-10!60;UBERON:0007500!1.05e-10!60;UBERON:0004537!1.05e-10!60;UBERON:0006965!1.05e-10!60;UBERON:0004573!1.49e-10!33;UBERON:0004571!1.49e-10!33;UBERON:0000490!5.49e-10!138;UBERON:0003914!7.25e-10!118;UBERON:0004872!1.59e-08!84;UBERON:0004535!5.81e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.82e-14;42!UBERON:0003509;6.82e-14;42!UBERON:0004572;6.82e-14;42!UBERON:0004573;2.99e-13;33!UBERON:0004571;2.99e-13;33!UBERON:0007500;5.11e-09;56!UBERON:0001981;5.11e-09;56!UBERON:0004537;5.11e-09;56!UBERON:0002107;8.23e-09;19!UBERON:0006925;8.23e-09;19!UBERON:0000055;3.80e-08;65!UBERON:0004237;1.12e-07;10!UBERON:0004695;1.12e-07;10!UBERON:0002111;1.12e-07;10!UBERON:0004178;1.12e-07;10!UBERON:0002423;1.22e-07;25!UBERON:0002049;2.42e-07;75!UBERON:0007798;2.42e-07;75!UBERON:0000947;6.34e-07;21!UBERON:0010191;6.34e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.42e-20,42;UBERON:0003509,1.42e-20,42;UBERON:0004572,1.42e-20,42;UBERON:0003914,4.32e-19,117;UBERON:0004573,5.07e-16,33;UBERON:0004571,5.07e-16,33;UBERON:0007500,9.71e-16,59;UBERON:0001981,9.71e-16,59;UBERON:0004537,9.71e-16,59;UBERON:0006965,9.71e-16,59;UBERON:0000055,1.92e-15,68;UBERON:0002049,6.32e-14,78;UBERON:0007798,6.32e-14,78;UBERON:0000490,7.32e-14,148;UBERON:0004872,1.09e-12,83;UBERON:0005256,7.04e-12,122;UBERON:0003104,8.77e-11,160;UBERON:0009142,8.77e-11,160;UBERON:0004535,1.50e-10,109;UBERON:0001009,4.56e-10,112;UBERON:0001134,9.83e-09,62;UBERON:0002036,9.83e-09,62;UBERON:0003082,9.83e-09,62;UBERON:0002107,1.00e-08,19;UBERON:0006925,1.00e-08,19;UBERON:0008836,1.00e-08,19;UBERON:0002385,2.58e-08,64;UBERON:0001015,2.58e-08,64;UBERON:0000383,2.58e-08,64;UBERON:0000025,2.59e-08,192;UBERON:0004237,9.37e-08,10;UBERON:0004695,9.37e-08,10;UBERON:0002111,9.37e-08,10;UBERON:0004178,9.37e-08,10;UBERON:0007499,1.38e-07,25;UBERON:0009497,1.48e-07,25;UBERON:0000015,1.48e-07,25;UBERON:0002423,1.48e-07,25;UBERON:0006235,1.48e-07,25;UBERON:0004161,1.48e-07,25;UBERON:0002100,1.66e-07,199;UBERON:0008835,2.78e-07,22;UBERON:0003894,2.78e-07,22;UBERON:0009856,3.25e-07,26;UBERON:0002329,4.77e-07,71;UBERON:0003059,4.77e-07,71;UBERON:0007282,4.77e-07,71;UBERON:0004290,4.77e-07,71;UBERON:0009618,4.77e-07,71;UBERON:0000947,5.02e-07,21;UBERON:0010191,5.02e-07,21;UBERON:0003077,6.89e-07,72;UBERON:0007285,6.89e-07,72;UBERON:0009854,6.92e-07,23;UBERON:0004111,7.66e-07,240;UBERON:0007503,8.17e-07,78;UBERON:0007524,9.84e-07,73 | |||
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| ||
|short_description=p3@SPAG4 | |||
}} | }} |
Latest revision as of 20:34, 15 September 2015
Short description: | p3@SPAG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPAG4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000498203_5end |
EntrezGene: | SPAG4 |
HGNC: | 11214 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.60e-17 | 32 |
smooth muscle cell | 6.03e-13 | 43 |
smooth muscle myoblast | 6.03e-13 | 43 |
muscle cell | 1.87e-10 | 55 |
muscle precursor cell | 1.16e-09 | 58 |
myoblast | 1.16e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.16e-09 | 58 |
electrically responsive cell | 5.92e-09 | 61 |
electrically active cell | 5.92e-09 | 61 |
aortic smooth muscle cell | 9.37e-08 | 10 |
mesodermal cell | 2.20e-07 | 121 |