FFCP PHASE1:Hg19::chr4:142558116..142558127,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:142558116..142558127,+
|short_description=p7@IL15
|description=CAGE_peak_7_at_IL15_5end
|association_with_transcript=16bp_to_ENST00000529613_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3600 | |EntrezGene=3600 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5977 | |HGNC=5977 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENST00000529613_5end | |||
|cluster_id=chr4:142558116..142558127,+ | |||
|coexpression_cluster_id=C681 | |||
|description=CAGE_peak_7_at_IL15_5end | |||
|id=chr4:142558116..142558127,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.55e-45!42;CL:0000860!5.03e-43!45;CL:0002009!7.29e-39!65;CL:0002194!2.37e-38!63;CL:0000576!2.37e-38!63;CL:0000040!2.37e-38!63;CL:0000559!2.37e-38!63;CL:0000557!9.81e-36!71;CL:0000839!1.92e-34!70;CL:0000766!4.00e-32!76;CL:0000763!1.39e-21!112;CL:0000049!1.39e-21!112;CL:0000738!4.22e-20!140;CL:0002087!1.13e-19!119;CL:0002031!1.55e-17!124;CL:0000037!3.99e-13!172;CL:0000566!3.99e-13!172;CL:0002032!2.12e-12!165;CL:0000837!2.12e-12!165;CL:0000988!3.31e-12!182;CL:0002393!1.27e-09!9;CL:0002397!1.27e-09!9;CL:0000134!2.22e-09!358;CL:0002320!8.97e-09!365;CL:0000990!2.29e-08!8;CL:0000219!2.20e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.19e-76;33!CL:0002057;3.19e-76;33!CL:0000473;1.05e-53;39!CL:0000234;1.05e-53;39!CL:0000576;5.74e-40;48!CL:0000453;1.76e-22;5!CL:0000766;2.53e-21;69!CL:0000990;7.32e-19;8!CL:0000451;2.10e-15;10!CL:0002087;1.08e-12;104!CL:0000763;1.15e-12;100!CL:0000738;5.32e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.40e-80,42;CL:0002057,6.40e-80,42;CL:0000473,2.08e-69,48;CL:0000234,2.08e-69,48;CL:0002009,6.57e-63,61;CL:0002194,1.15e-59,59;CL:0000576,1.15e-59,59;CL:0000040,1.15e-59,59;CL:0000559,1.15e-59,59;CL:0000557,5.73e-57,67;CL:0000839,5.60e-53,66;CL:0000766,2.89e-48,72;CL:0000763,1.39e-43,108;CL:0000049,1.39e-43,108;CL:0000738,1.03e-33,136;CL:0002031,4.81e-30,120;CL:0002087,9.79e-29,115;CL:0002032,8.95e-28,161;CL:0000837,8.95e-28,161;CL:0000037,2.00e-26,168;CL:0000988,7.60e-25,177;CL:0000453,1.97e-22,5;CL:0000990,8.34e-19,8;CL:0000451,2.34e-15,10;CL:0000134,5.29e-11,354;CL:0002320,1.09e-10,361;CL:0000219,1.37e-09,386;CL:0000034,1.08e-08,441;CL:0000048,3.06e-08,427;CL:0000723,4.70e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;4.13e-54;42!CL:0000049;5.22e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.18e-35!102;UBERON:0003061!1.18e-35!102;UBERON:0002193!3.24e-33!112;UBERON:0002371!6.80e-30!80;UBERON:0001474!1.07e-26!86;UBERON:0002405!2.53e-24!115;UBERON:0004765!1.93e-21!101;UBERON:0001434!1.93e-21!101;UBERON:0003081!1.07e-11!216;UBERON:0002204!5.06e-10!167;UBERON:0002384!2.14e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.62e-50,76;UBERON:0001474,7.21e-46,82;UBERON:0004765,1.92e-41,90;UBERON:0002405,5.63e-40,93;UBERON:0002390,9.94e-38,98;UBERON:0003061,9.94e-38,98;UBERON:0001434,6.82e-37,100;UBERON:0002193,7.48e-34,108;UBERON:0002204,2.38e-20,167;UBERON:0003081,6.18e-16,203;UBERON:0002384,2.89e-10,371;UBERON:0000926,1.44e-09,315;UBERON:0004120,1.44e-09,315;UBERON:0006603,1.44e-09,315 | |||
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|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,1.10799081706375,1.20326668482085,0.217010870715852,0.223915474239924,0,0.257575567634187,0,0.377875943688809,0,0.232429036905685,0,0.619412741790207,2.58923153089935,2.81776777182011,4.02019790810595,1.37898272294647,2.5819387343353,2.70852973188684,0.376484679085209,0.272906150057846,0.449446968890169,3.06083892370903,2.88836124368484,1.91801137739712,3.95821560224059,4.78712778291916,2.98357325372886,6.96502172708602,3.97169657283798,2.4912889959823,3.01498398308092,1.0429658368404,2.38907729175628,7.26479403160043,3.31449872388808,7.27863491114034,0.633765858935825,0.425208599930087,0,0.112328631146495,0.150176892841506,0.16072558669708,0.285012743741249,0.19891667719909,0.91332076882317,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,0,0.486634870302636,0,0,0,0,0.364295288292542,0,0.649094787309367,1.0447784237956,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0,0,0.989067717114227,0,0,0,0,0,0,0,0.150238058906597,0,0,0.640672166455702,0.211931901159562,0,0.206105058476878,0,0.18611685633159,0,0,0,0.0920498986422993,0.80823028409406,0.710019185033229,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.723033089650446,0,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.788512075169673,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0.110579259931225,0,0,0.32681539055697,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0.146178634172371,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,6.74921674654501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0.310525913752519,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0,0,0.345430341731199,0,0,6.04066957402104,2.65729680626726,7.19687734725715,0,0,0,0.59996218756479,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0.109940516745429,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0.4226557275834,0.169927114687817,0.281951753939561,0.257831551894309,0.599646935549574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0.23806443146374,0.322944549180031,0.372448285775147,0,0.12729431655633,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0.320568492303233 | ||
|short_description=p7@IL15 | |||
}} | }} |
Latest revision as of 20:43, 15 September 2015
Short description: | p7@IL15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_IL15_5end |
Coexpression cluster: | C681_immature_CD14_migratory_CD34_Eosinophils_Basophils_Dendritic |
Association with transcript: | 16bp_to_ENST00000529613_5end |
EntrezGene: | IL15 |
HGNC: | 5977 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.40e-80 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.40e-80 | 42 |
defensive cell | 2.08e-69 | 48 |
phagocyte | 2.08e-69 | 48 |
macrophage dendritic cell progenitor | 6.57e-63 | 61 |
monopoietic cell | 1.15e-59 | 59 |
monocyte | 1.15e-59 | 59 |
monoblast | 1.15e-59 | 59 |
promonocyte | 1.15e-59 | 59 |
granulocyte monocyte progenitor cell | 5.73e-57 | 67 |
myeloid lineage restricted progenitor cell | 5.60e-53 | 66 |
myeloid leukocyte | 2.89e-48 | 72 |
myeloid cell | 1.39e-43 | 108 |
common myeloid progenitor | 1.39e-43 | 108 |
leukocyte | 1.03e-33 | 136 |
hematopoietic lineage restricted progenitor cell | 4.81e-30 | 120 |
nongranular leukocyte | 9.79e-29 | 115 |
hematopoietic oligopotent progenitor cell | 8.95e-28 | 161 |
hematopoietic multipotent progenitor cell | 8.95e-28 | 161 |
hematopoietic stem cell | 2.00e-26 | 168 |
hematopoietic cell | 7.60e-25 | 177 |
Langerhans cell | 1.97e-22 | 5 |
conventional dendritic cell | 8.34e-19 | 8 |
dendritic cell | 2.34e-15 | 10 |
mesenchymal cell | 5.29e-11 | 354 |
connective tissue cell | 1.09e-10 | 361 |
motile cell | 1.37e-09 | 386 |
stem cell | 1.08e-08 | 441 |
multi fate stem cell | 3.06e-08 | 427 |
somatic stem cell | 4.70e-08 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.62e-50 | 76 |
bone element | 7.21e-46 | 82 |
skeletal element | 1.92e-41 | 90 |
immune system | 5.63e-40 | 93 |
hematopoietic system | 9.94e-38 | 98 |
blood island | 9.94e-38 | 98 |
skeletal system | 6.82e-37 | 100 |
hemolymphoid system | 7.48e-34 | 108 |
musculoskeletal system | 2.38e-20 | 167 |
lateral plate mesoderm | 6.18e-16 | 203 |
connective tissue | 2.89e-10 | 371 |
mesoderm | 1.44e-09 | 315 |
mesoderm-derived structure | 1.44e-09 | 315 |
presumptive mesoderm | 1.44e-09 | 315 |