FFCP PHASE1:Hg19::chr4:144434814..144434932,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:144434814..144434932,+
|short_description=p1@SMARCA5
|description=CAGE_peak_1_at_SMARCA5_5end
|association_with_transcript=197bp_to_ENST00000536484_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8467 | |EntrezGene=8467 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11101 | |HGNC=11101 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZI1 | |UniProt=F5GZI1 | ||
|association_with_transcript=197bp_to_ENST00000536484_5end | |||
|cluster_id=chr4:144434814..144434932,+ | |||
|description=CAGE_peak_1_at_SMARCA5_5end | |||
|id=chr4:144434814..144434932,+ | |||
|ontology_enrichment_celltype=CL:0000037!8.17e-42!172;CL:0000566!8.17e-42!172;CL:0002032!3.73e-40!165;CL:0000837!3.73e-40!165;CL:0000988!1.88e-37!182;CL:0000738!4.36e-36!140;CL:0002031!1.78e-30!124;CL:0002087!1.85e-29!119;CL:0000763!1.81e-21!112;CL:0000049!1.81e-21!112;CL:0000542!1.33e-17!53;CL:0000051!1.33e-17!53;CL:0000838!2.46e-17!52;CL:0000766!9.69e-16!76;CL:0000839!9.95e-14!70;CL:0000557!4.32e-13!71;CL:0002057!3.33e-11!42;CL:0002194!3.50e-11!63;CL:0000576!3.50e-11!63;CL:0000040!3.50e-11!63;CL:0000559!3.50e-11!63;CL:0002009!5.44e-11!65;CL:0000860!9.70e-11!45;CL:0000084!1.25e-08!25;CL:0000827!1.25e-08!25;CL:0000945!1.71e-08!24;CL:0000826!1.71e-08!24;CL:0000791!3.36e-08!18;CL:0000789!3.36e-08!18;CL:0002420!3.36e-08!18;CL:0002419!3.36e-08!18;CL:0000790!3.36e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0002087;4.13e-10;104!CL:0000542;4.85e-10;53!CL:0000860;2.95e-09;33!CL:0002057;2.95e-09;33!CL:0000084;1.32e-08;25!CL:0000576;1.68e-08;48!CL:0000945;1.74e-08;24!CL:0000738;2.24e-08;136!CL:0000791;3.46e-08;18!CL:0000789;3.46e-08;18!CL:0002419;3.46e-08;18!CL:0000988;1.73e-07;177!CL:0000473;2.31e-07;39!CL:0000234;2.31e-07;39!CL:0000766;2.65e-07;69!CL:0000763;6.80e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.46e-43,168;CL:0002032,3.78e-41,161;CL:0000837,3.78e-41,161;CL:0000988,4.33e-39,177;CL:0000738,3.63e-37,136;CL:0002031,1.58e-31,120;CL:0002087,1.59e-30,115;CL:0000763,2.60e-22,108;CL:0000049,2.60e-22,108;CL:0000542,1.33e-17,53;CL:0000051,1.33e-17,53;CL:0000838,2.46e-17,52;CL:0000766,1.16e-16,72;CL:0000839,1.32e-14,66;CL:0000557,6.47e-14,67;CL:0002194,5.65e-12,59;CL:0000576,5.65e-12,59;CL:0000040,5.65e-12,59;CL:0000559,5.65e-12,59;CL:0002009,9.55e-12,61;CL:0000860,3.33e-11,42;CL:0002057,3.33e-11,42;CL:0000473,1.96e-10,48;CL:0000234,1.96e-10,48;CL:0000084,1.25e-08,25;CL:0000827,1.25e-08,25;CL:0000945,1.71e-08,24;CL:0000826,1.71e-08,24;CL:0000791,3.36e-08,18;CL:0000789,3.36e-08,18;CL:0002420,3.36e-08,18;CL:0002419,3.36e-08,18;CL:0000790,3.36e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000051;4.85e-10;53!CL:0002057;2.49e-08;42!CL:0000790;3.46e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.94e-13!102;UBERON:0003061!1.94e-13!102;UBERON:0002193!1.40e-11!112;UBERON:0007023!1.24e-10!115;UBERON:0001474!3.94e-10!86;UBERON:0002371!9.91e-10!80;UBERON:0004765!7.89e-08!101;UBERON:0001434!7.89e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.94e-14,98;UBERON:0003061,4.94e-14,98;UBERON:0002193,4.74e-12,108;UBERON:0001474,1.15e-10,82;UBERON:0007023,1.68e-10,114;UBERON:0002371,2.80e-10,76;UBERON:0002405,1.12e-09,93;UBERON:0004765,1.65e-08,90;UBERON:0001434,1.79e-07,100 | |||
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|short_description=p1@SMARCA5 | |||
}} | }} |
Latest revision as of 21:56, 15 September 2015
Short description: | p1@SMARCA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SMARCA5_5end |
Coexpression cluster: | NA |
Association with transcript: | 197bp_to_ENST00000536484_5end |
EntrezGene: | SMARCA5 |
HGNC: | 11101 |
UniProt: | F5GZI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.94e-14 | 98 |
blood island | 4.94e-14 | 98 |
hemolymphoid system | 4.74e-12 | 108 |
bone element | 1.15e-10 | 82 |
adult organism | 1.68e-10 | 114 |
bone marrow | 2.80e-10 | 76 |
immune system | 1.12e-09 | 93 |
skeletal element | 1.65e-08 | 90 |
skeletal system | 1.79e-07 | 100 |