FFCP PHASE1:Hg19::chr14:73572641..73572756,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58517 | |EntrezGene=58517 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23244 | |HGNC=23244 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-231bp_to_ENST00000532483_5end | |association_with_transcript=-231bp_to_ENST00000532483_5end | ||
|cluster_id=chr14:73572641..73572756,+ | |||
|coexpression_cluster_id=C1037 | |||
|description=CAGE_peak_4_at_RBM25_5end | |description=CAGE_peak_4_at_RBM25_5end | ||
|id=chr14:73572641..73572756,+ | |id=chr14:73572641..73572756,+ | ||
|ontology_enrichment_celltype=CL:0002032!4.59e-09!165;CL:0000837!4.59e-09!165;CL:0000037!5.47e-08!172;CL:0000566!5.47e-08!172;CL:0002087!9.18e-08!119;CL:0000860!3.95e-07!45;CL:0000738!4.19e-07!140;CL:0002031!7.96e-07!124 | |ontology_enrichment_celltype=CL:0002032!4.59e-09!165;CL:0000837!4.59e-09!165;CL:0000037!5.47e-08!172;CL:0000566!5.47e-08!172;CL:0002087!9.18e-08!119;CL:0000860!3.95e-07!45;CL:0000738!4.19e-07!140;CL:0002031!7.96e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.75e-07;33!CL:0002057;4.75e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,1.94e-08,161;CL:0000837,1.94e-08,161;CL:0000037,1.88e-07,168;CL:0002087,5.07e-07,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.18e-14!235;DOID:14566!4.48e-14!239;DOID:0050687!2.34e-08!143 | |ontology_enrichment_disease=DOID:162!1.18e-14!235;DOID:14566!4.48e-14!239;DOID:0050687!2.34e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.93e-13,235;DOID:14566,1.56e-12,239;DOID:0050687,1.11e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.46e-10!57;UBERON:0005068!3.46e-10!57;UBERON:0006241!3.46e-10!57;UBERON:0007135!3.46e-10!57;UBERON:0002780!1.62e-09!41;UBERON:0001890!1.62e-09!41;UBERON:0006240!1.62e-09!41;UBERON:0002020!4.08e-09!34;UBERON:0003528!4.08e-09!34;UBERON:0003080!9.37e-09!42;UBERON:0001017!1.00e-08!82;UBERON:0000073!3.51e-08!94;UBERON:0001016!3.51e-08!94;UBERON:0002791!5.39e-08!33;UBERON:0001893!1.12e-07!34;UBERON:0000955!2.23e-07!69;UBERON:0006238!2.23e-07!69;UBERON:0005743!2.44e-07!86;UBERON:0001869!2.56e-07!32;UBERON:0002616!3.33e-07!59;UBERON:0002346!4.02e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;6.72e-08;34!UBERON:0002020;6.72e-08;34!UBERON:0002791;1.03e-07;32!UBERON:0002780;2.24e-07;41!UBERON:0001890;2.24e-07;41!UBERON:0001869;8.91e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.05e-11,56;UBERON:0005068,2.05e-11,56;UBERON:0006241,2.05e-11,56;UBERON:0007135,2.05e-11,56;UBERON:0000073,2.54e-10,53;UBERON:0002616,2.54e-10,53;UBERON:0001016,3.04e-10,89;UBERON:0001017,1.17e-09,81;UBERON:0002780,1.95e-09,41;UBERON:0001890,1.95e-09,41;UBERON:0003080,1.95e-09,41;UBERON:0006240,1.95e-09,41;UBERON:0003528,3.17e-09,34;UBERON:0002020,3.17e-09,34;UBERON:0002346,5.58e-09,86;UBERON:0000955,1.32e-08,68;UBERON:0006238,1.32e-08,68;UBERON:0002791,3.46e-08,32;UBERON:0003075,1.14e-07,82;UBERON:0007284,1.14e-07,82;UBERON:0001893,1.84e-07,34;UBERON:0001869,4.53e-07,32 | |||
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| ||
|short_description=p4@RBM25 | |short_description=p4@RBM25 | ||
}} | }} |
Latest revision as of 22:47, 15 September 2015
Short description: | p4@RBM25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RBM25_5end |
Coexpression cluster: | C1037_acute_medulloblastoma_Monocytederived_CD4_diffuse_testicular_small |
Association with transcript: | -231bp_to_ENST00000532483_5end |
EntrezGene: | RBM25 |
HGNC: | 23244 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 1.94e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.94e-08 | 161 |
hematopoietic stem cell | 1.88e-07 | 168 |
nongranular leukocyte | 5.07e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
neural tube | 2.05e-11 | 56 |
neural rod | 2.05e-11 | 56 |
future spinal cord | 2.05e-11 | 56 |
neural keel | 2.05e-11 | 56 |
regional part of nervous system | 2.54e-10 | 53 |
regional part of brain | 2.54e-10 | 53 |
nervous system | 3.04e-10 | 89 |
central nervous system | 1.17e-09 | 81 |
regional part of forebrain | 1.95e-09 | 41 |
forebrain | 1.95e-09 | 41 |
anterior neural tube | 1.95e-09 | 41 |
future forebrain | 1.95e-09 | 41 |
brain grey matter | 3.17e-09 | 34 |
gray matter | 3.17e-09 | 34 |
neurectoderm | 5.58e-09 | 86 |
brain | 1.32e-08 | 68 |
future brain | 1.32e-08 | 68 |
regional part of telencephalon | 3.46e-08 | 32 |
neural plate | 1.14e-07 | 82 |
presumptive neural plate | 1.14e-07 | 82 |
telencephalon | 1.84e-07 | 34 |
cerebral hemisphere | 4.53e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.93e-13 | 235 |
disease of cellular proliferation | 1.56e-12 | 239 |
cell type cancer | 1.11e-07 | 143 |