FFCP PHASE1:Hg19::chr20:35234223..35234234,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:35234223..35234234,+ to FFCP PHASE1:Hg19::chr20:35234223..35234234,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55969 | |EntrezGene=55969 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15870 | |HGNC=15870 | ||
|TSSclassifier=strong | |||
|UniProt=Q5QPG6 | |UniProt=Q5QPG6 | ||
|association_with_transcript=0bp_to_ENST00000342422_5end | |||
|cluster_id=chr20:35234223..35234234,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_C20orf24_5end | |||
|id=chr20:35234223..35234234,+ | |||
|ontology_enrichment_celltype=CL:0002009!2.53e-27!65;CL:0000766!3.16e-27!76;CL:0002194!6.24e-27!63;CL:0000576!6.24e-27!63;CL:0000040!6.24e-27!63;CL:0000559!6.24e-27!63;CL:0000763!5.32e-24!112;CL:0000049!5.32e-24!112;CL:0000557!3.28e-23!71;CL:0000738!5.63e-23!140;CL:0000860!8.00e-23!45;CL:0000037!2.20e-22!172;CL:0000566!2.20e-22!172;CL:0002057!2.48e-22!42;CL:0000988!3.94e-21!182;CL:0000839!5.31e-21!70;CL:0000063!3.99e-20!578;CL:0002032!5.54e-20!165;CL:0000837!5.54e-20!165;CL:0002087!6.02e-20!119;CL:0002031!1.11e-15!124;CL:0000012!1.68e-14!682;CL:0000548!9.70e-14!679;CL:0000004!9.70e-14!679;CL:0000255!9.70e-14!679;CL:0000003!4.63e-12!722;CL:0000134!6.32e-11!358;CL:0002320!8.66e-10!365;CL:0000144!9.55e-10!625;CL:0000048!3.12e-09!430;CL:0000723!1.31e-08!436;CL:0000034!2.12e-08!444;CL:0002371!3.15e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.84e-16;39!CL:0000234;1.84e-16;39!CL:0000860;2.85e-16;33!CL:0002057;2.85e-16;33!CL:0000576;4.06e-15;48!CL:0000766;1.12e-11;69!CL:0000763;6.96e-08;100!CL:0000094;6.76e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.33e-28,61;CL:0000766,1.34e-28,72;CL:0002194,3.13e-28,59;CL:0000576,3.13e-28,59;CL:0000040,3.13e-28,59;CL:0000559,3.13e-28,59;CL:0000473,5.43e-26,48;CL:0000234,5.43e-26,48;CL:0000763,9.44e-25,108;CL:0000049,9.44e-25,108;CL:0000557,2.06e-24,67;CL:0000738,6.71e-23,136;CL:0000860,1.03e-22,42;CL:0002057,1.03e-22,42;CL:0000037,3.38e-22,168;CL:0000839,4.13e-22,66;CL:0000988,6.78e-21,177;CL:0002032,9.05e-20,161;CL:0000837,9.05e-20,161;CL:0002087,1.19e-19,115;CL:0002031,1.62e-15,120;CL:0000134,1.02e-10,354;CL:0002320,1.61e-09,361;CL:0000048,1.10e-08,427;CL:0000723,4.74e-08,433;CL:0000034,9.19e-08,441;CL:0000094,8.61e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;8.59e-17;42!CL:0000049;2.62e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.27e-24!102;UBERON:0003061!1.27e-24!102;UBERON:0002193!1.89e-24!112;UBERON:0002371!1.59e-20!80;UBERON:0002405!2.70e-20!115;UBERON:0001474!1.57e-16!86;UBERON:0003081!5.43e-14!216;UBERON:0004765!3.11e-13!101;UBERON:0001434!3.11e-13!101;UBERON:0000926!2.68e-10!448;UBERON:0004120!2.68e-10!448;UBERON:0006603!2.68e-10!448;UBERON:0002384!4.10e-09!375;UBERON:0002204!2.68e-07!167;UBERON:0000178!7.29e-07!15;UBERON:0000179!7.29e-07!15;UBERON:0000463!7.29e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.89e-07;15!UBERON:0000179;5.89e-07;15!UBERON:0000463;5.89e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.48e-25,98;UBERON:0003061,1.48e-25,98;UBERON:0002193,2.94e-25,108;UBERON:0002371,1.54e-21,76;UBERON:0002405,1.51e-19,93;UBERON:0001474,1.94e-17,82;UBERON:0004765,6.11e-15,90;UBERON:0003081,9.71e-15,203;UBERON:0001434,4.90e-12,100;UBERON:0002384,8.10e-09,371;UBERON:0000926,1.56e-07,315;UBERON:0004120,1.56e-07,315;UBERON:0006603,1.56e-07,315;UBERON:0000178,5.82e-07,15;UBERON:0000179,5.82e-07,15;UBERON:0000463,5.82e-07,15 | |||
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| ||
|short_description=p2@C20orf24 | |||
}} | }} |
Latest revision as of 23:35, 15 September 2015
Short description: | p2@C20orf24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C20orf24_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000342422_5end |
EntrezGene: | C20orf24 |
HGNC: | 15870 |
UniProt: | Q5QPG6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 1.33e-28 | 61 |
myeloid leukocyte | 1.34e-28 | 72 |
monopoietic cell | 3.13e-28 | 59 |
monocyte | 3.13e-28 | 59 |
monoblast | 3.13e-28 | 59 |
promonocyte | 3.13e-28 | 59 |
defensive cell | 5.43e-26 | 48 |
phagocyte | 5.43e-26 | 48 |
myeloid cell | 9.44e-25 | 108 |
common myeloid progenitor | 9.44e-25 | 108 |
granulocyte monocyte progenitor cell | 2.06e-24 | 67 |
leukocyte | 6.71e-23 | 136 |
classical monocyte | 1.03e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.03e-22 | 42 |
hematopoietic stem cell | 3.38e-22 | 168 |
myeloid lineage restricted progenitor cell | 4.13e-22 | 66 |
hematopoietic cell | 6.78e-21 | 177 |
hematopoietic oligopotent progenitor cell | 9.05e-20 | 161 |
hematopoietic multipotent progenitor cell | 9.05e-20 | 161 |
nongranular leukocyte | 1.19e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 1.62e-15 | 120 |
mesenchymal cell | 1.02e-10 | 354 |
connective tissue cell | 1.61e-09 | 361 |
multi fate stem cell | 1.10e-08 | 427 |
somatic stem cell | 4.74e-08 | 433 |
stem cell | 9.19e-08 | 441 |
granulocyte | 8.61e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.48e-25 | 98 |
blood island | 1.48e-25 | 98 |
hemolymphoid system | 2.94e-25 | 108 |
bone marrow | 1.54e-21 | 76 |
immune system | 1.51e-19 | 93 |
bone element | 1.94e-17 | 82 |
skeletal element | 6.11e-15 | 90 |
lateral plate mesoderm | 9.71e-15 | 203 |
skeletal system | 4.90e-12 | 100 |
connective tissue | 8.10e-09 | 371 |
mesoderm | 1.56e-07 | 315 |
mesoderm-derived structure | 1.56e-07 | 315 |
presumptive mesoderm | 1.56e-07 | 315 |
blood | 5.82e-07 | 15 |
haemolymphatic fluid | 5.82e-07 | 15 |
organism substance | 5.82e-07 | 15 |