FFCP PHASE1:Hg19::chr9:132597529..132597575,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51759 | |EntrezGene=51759 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24932 | |HGNC=24932 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZ63,E7EVT7 | |UniProt=Q9NZ63,E7EVT7 | ||
|association_with_transcript=0bp_to_ENST00000372447,ENST00000435276,ENST00000461349,ENST00000492991,NM_016520,uc004byp.2_5end | |association_with_transcript=0bp_to_ENST00000372447,ENST00000435276,ENST00000461349,ENST00000492991,NM_016520,uc004byp.2_5end | ||
|cluster_id=chr9:132597529..132597575,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_C9orf78_5end | |description=CAGE_peak_1_at_C9orf78_5end | ||
|id=chr9:132597529..132597575,- | |id=chr9:132597529..132597575,- | ||
|ontology_enrichment_celltype=CL:0000037!1.37e-21!172;CL:0000566!1.37e-21!172;CL:0002032!3.50e-19!165;CL:0000837!3.50e-19!165;CL:0000988!7.06e-18!182;CL:0000738!8.44e-15!140;CL:0000791!5.03e-11!18;CL:0000789!5.03e-11!18;CL:0002420!5.03e-11!18;CL:0002419!5.03e-11!18;CL:0000790!5.03e-11!18;CL:0000838!2.25e-10!52;CL:0002031!2.66e-10!124;CL:0000542!4.29e-10!53;CL:0000051!4.29e-10!53;CL:0000763!8.59e-10!112;CL:0000049!8.59e-10!112;CL:0000084!1.91e-09!25;CL:0000827!1.91e-09!25;CL:0002087!1.97e-09!119;CL:0000625!1.62e-07!11 | |ontology_enrichment_celltype=CL:0000037!1.37e-21!172;CL:0000566!1.37e-21!172;CL:0002032!3.50e-19!165;CL:0000837!3.50e-19!165;CL:0000988!7.06e-18!182;CL:0000738!8.44e-15!140;CL:0000791!5.03e-11!18;CL:0000789!5.03e-11!18;CL:0002420!5.03e-11!18;CL:0002419!5.03e-11!18;CL:0000790!5.03e-11!18;CL:0000838!2.25e-10!52;CL:0002031!2.66e-10!124;CL:0000542!4.29e-10!53;CL:0000051!4.29e-10!53;CL:0000763!8.59e-10!112;CL:0000049!8.59e-10!112;CL:0000084!1.91e-09!25;CL:0000827!1.91e-09!25;CL:0002087!1.97e-09!119;CL:0000625!1.62e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.08e-11;18!CL:0000789;5.08e-11;18!CL:0002419;5.08e-11;18!CL:0000084;1.76e-09;25!CL:0000625;1.65e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.26e-21,168;CL:0002032,2.20e-18,161;CL:0000837,2.20e-18,161;CL:0000988,1.25e-17,177;CL:0000738,4.62e-14,136;CL:0000791,5.03e-11,18;CL:0000789,5.03e-11,18;CL:0002420,5.03e-11,18;CL:0002419,5.03e-11,18;CL:0000790,5.03e-11,18;CL:0000838,2.25e-10,52;CL:0000542,4.29e-10,53;CL:0000051,4.29e-10,53;CL:0002031,1.21e-09,120;CL:0000084,1.91e-09,25;CL:0000827,1.91e-09,25;CL:0000763,3.89e-09,108;CL:0000049,3.89e-09,108;CL:0002087,8.60e-09,115;CL:0000625,1.62e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;5.08e-11;18 | |||
|ontology_enrichment_disease=DOID:1240!9.38e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,9.38e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.16e-18!115;UBERON:0000178!1.73e-07!15;UBERON:0000179!1.73e-07!15;UBERON:0000463!1.73e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!1.16e-18!115;UBERON:0000178!1.73e-07!15;UBERON:0000179!1.73e-07!15;UBERON:0000463!1.73e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.73e-07;15!UBERON:0000179;1.73e-07;15!UBERON:0000463;1.73e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.66e-18,114;UBERON:0000178,1.73e-07,15;UBERON:0000179,1.73e-07,15;UBERON:0000463,1.73e-07,15 | |||
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| ||
|short_description=p1@C9orf78 | |short_description=p1@C9orf78 | ||
}} | }} |
Latest revision as of 23:35, 15 September 2015
Short description: | p1@C9orf78 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C9orf78_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000372447, ENST00000435276, ENST00000461349, ENST00000492991, NM_016520, uc004byp.2_5end |
EntrezGene: | C9orf78 |
HGNC: | 24932 |
UniProt: | Q9NZ63E7EVT7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 9.26e-21 | 168 |
hematopoietic oligopotent progenitor cell | 2.20e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.20e-18 | 161 |
hematopoietic cell | 1.25e-17 | 177 |
leukocyte | 4.62e-14 | 136 |
mature alpha-beta T cell | 5.03e-11 | 18 |
alpha-beta T cell | 5.03e-11 | 18 |
immature T cell | 5.03e-11 | 18 |
mature T cell | 5.03e-11 | 18 |
immature alpha-beta T cell | 5.03e-11 | 18 |
lymphoid lineage restricted progenitor cell | 2.25e-10 | 52 |
lymphocyte | 4.29e-10 | 53 |
common lymphoid progenitor | 4.29e-10 | 53 |
hematopoietic lineage restricted progenitor cell | 1.21e-09 | 120 |
T cell | 1.91e-09 | 25 |
pro-T cell | 1.91e-09 | 25 |
myeloid cell | 3.89e-09 | 108 |
common myeloid progenitor | 3.89e-09 | 108 |
nongranular leukocyte | 8.60e-09 | 115 |
CD8-positive, alpha-beta T cell | 1.62e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.66e-18 | 114 |
blood | 1.73e-07 | 15 |
haemolymphatic fluid | 1.73e-07 | 15 |
organism substance | 1.73e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
leukemia | 9.38e-07 | 39 |