FFCP PHASE1:Hg19::chr19:13229019..13229048,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=112939 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20967 | |||
|TSSclassifier=strong | |||
|UniProt=Q96RE7 | |||
|association_with_transcript=-60bp_to_ENST00000292431,NM_052876,uc002mwm.2_5end | |||
|cluster_id=chr19:13229019..13229048,+ | |||
|description=CAGE_peak_2_at_NACC1_5end | |||
|id=chr19:13229019..13229048,+ | |||
|ontology_enrichment_celltype=CL:0002321!7.67e-21!248;CL:0000220!4.63e-20!246;CL:0000066!3.72e-16!254;CL:0000222!2.79e-14!119;CL:0000055!6.46e-10!180;CL:0000183!2.75e-09!59;CL:0000680!1.59e-08!57;CL:0000056!1.59e-08!57;CL:0000355!1.59e-08!57;CL:0000548!1.89e-08!679;CL:0000004!1.89e-08!679;CL:0000255!1.89e-08!679;CL:0000076!2.16e-08!62;CL:0000393!5.43e-08!60;CL:0000211!5.43e-08!60;CL:0000187!7.13e-08!54;CL:0000192!8.13e-08!42;CL:0000514!8.13e-08!42;CL:0000012!8.99e-08!682 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.71e-08;15!CL:1000497;2.75e-07;17!CL:0002518;2.75e-07;17!CL:1000507;6.41e-07;10!CL:1000494;6.41e-07;10!CL:0002681;6.53e-07;12!CL:0002584;6.53e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.43e-19,250;CL:0000222,1.19e-14,121;CL:0000066,2.38e-14,253;CL:0000680,1.27e-08,58;CL:0000056,1.27e-08,58;CL:0000355,1.27e-08,58;CL:1000449,2.82e-08,15;CL:0000393,3.59e-08,61;CL:0000211,3.59e-08,61;CL:0000076,5.20e-08,63;CL:0000192,6.63e-08,43;CL:0000514,6.63e-08,43;CL:0000187,6.65e-08,55;CL:1000497,2.49e-07,17;CL:0002518,2.49e-07,17;CL:1000507,5.87e-07,10;CL:1000494,5.87e-07,10;CL:0002681,8.16e-07,12;CL:0002584,8.16e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!3.48e-14!312;UBERON:0000483!1.20e-13!309;UBERON:0005256!6.93e-10!143;UBERON:0000475!8.94e-09!365;UBERON:0000481!9.09e-09!347;UBERON:0000486!2.84e-08!82;UBERON:0000490!3.38e-08!138;UBERON:0004290!5.97e-08!70;UBERON:0000914!8.37e-08!83;UBERON:0002329!8.37e-08!83;UBERON:0003077!8.37e-08!83;UBERON:0003059!8.37e-08!83;UBERON:0007282!8.37e-08!83;UBERON:0009618!8.37e-08!83;UBERON:0007285!8.37e-08!83;UBERON:0001134!3.00e-07!61;UBERON:0002036!3.00e-07!61;UBERON:0003082!3.00e-07!61;UBERON:0002100!5.85e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.71e-08;15!UBERON:0004819;2.71e-08;15!UBERON:0001285;2.71e-08;15!UBERON:0007684;2.71e-08;15!UBERON:0002113;5.82e-08;24!UBERON:0011143;5.82e-08;24!UBERON:0001851;2.28e-07;15!UBERON:0006554;2.90e-07;30!UBERON:0001008;2.90e-07;30!UBERON:0004211;6.41e-07;10!UBERON:0009773;6.41e-07;10!UBERON:0001231;6.41e-07;10!UBERON:0004810;6.41e-07;10!UBERON:0001225;6.53e-07;12!UBERON:0008987;6.53e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.18e-13,309;UBERON:0000483,4.33e-13,306;UBERON:0007503,2.39e-10,78;UBERON:0003104,2.51e-10,160;UBERON:0009142,2.51e-10,160;UBERON:0000490,5.32e-09,148;UBERON:0007524,1.92e-08,73;UBERON:0005256,2.77e-08,122;UBERON:0004211,2.82e-08,15;UBERON:0009773,2.82e-08,15;UBERON:0001231,2.82e-08,15;UBERON:0001285,2.82e-08,15;UBERON:0007684,2.82e-08,15;UBERON:0004208,2.82e-08,15;UBERON:0003077,3.21e-08,72;UBERON:0007285,3.21e-08,72;UBERON:0002329,3.88e-08,71;UBERON:0003059,3.88e-08,71;UBERON:0007282,3.88e-08,71;UBERON:0004290,3.88e-08,71;UBERON:0009618,3.88e-08,71;UBERON:0000486,6.80e-08,83;UBERON:0002100,6.92e-08,199;UBERON:0001134,2.04e-07,62;UBERON:0002036,2.04e-07,62;UBERON:0003082,2.04e-07,62;UBERON:0006555,2.47e-07,16;UBERON:0004819,2.47e-07,16;UBERON:0006554,2.70e-07,47;UBERON:0001851,3.11e-07,15;UBERON:0004810,5.87e-07,10;UBERON:0001008,6.98e-07,48;UBERON:0002113,7.00e-07,26;UBERON:0003918,7.00e-07,26;UBERON:0011143,7.00e-07,26;UBERON:0005095,7.00e-07,26;UBERON:0007687,7.00e-07,26;UBERON:0000025,7.99e-07,192;UBERON:0001225,8.16e-07,12;UBERON:0008987,8.16e-07,12 | |||
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| |||
|short_description=p2@NACC1 | |||
}} |
Latest revision as of 00:24, 16 September 2015
Short description: | p2@NACC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NACC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -60bp_to_ENST00000292431, NM_052876, uc002mwm.2_5end |
EntrezGene: | NACC1 |
HGNC: | 20967 |
UniProt: | Q96RE7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.43e-19 | 250 |
mesodermal cell | 1.19e-14 | 121 |
epithelial cell | 2.38e-14 | 253 |
muscle precursor cell | 1.27e-08 | 58 |
myoblast | 1.27e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.27e-08 | 58 |
epithelial cell of nephron | 2.82e-08 | 15 |
electrically responsive cell | 3.59e-08 | 61 |
electrically active cell | 3.59e-08 | 61 |
squamous epithelial cell | 5.20e-08 | 63 |
smooth muscle cell | 6.63e-08 | 43 |
smooth muscle myoblast | 6.63e-08 | 43 |
muscle cell | 6.65e-08 | 55 |
kidney cell | 2.49e-07 | 17 |
kidney epithelial cell | 2.49e-07 | 17 |
kidney tubule cell | 5.87e-07 | 10 |
nephron tubule epithelial cell | 5.87e-07 | 10 |
kidney cortical cell | 8.16e-07 | 12 |
renal cortical epithelial cell | 8.16e-07 | 12 |