FFCP PHASE1:Hg19::chr2:235405658..235405669,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10123 | |EntrezGene=10123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=698 | |HGNC=698 | ||
|TSSclassifier=strong | |||
|UniProt=P56559 | |UniProt=P56559 | ||
|association_with_transcript=23bp_to_NM_005737,uc002vvn.2_5end | |association_with_transcript=23bp_to_NM_005737,uc002vvn.2_5end | ||
|cluster_id=chr2:235405658..235405669,- | |||
|coexpression_cluster_id=C4201 | |||
|description=CAGE_peak_4_at_ARL4C_5end | |description=CAGE_peak_4_at_ARL4C_5end | ||
|id=chr2:235405658..235405669,- | |id=chr2:235405658..235405669,- | ||
|ontology_enrichment_celltype=CL:0000738!5.30e-16!140;CL:0002057!1.03e-12!42;CL:0002087!6.11e-11!119;CL:0002031!6.83e-11!124;CL:0000860!1.13e-10!45;CL:0000557!3.32e-10!71;CL:0000766!7.13e-10!76;CL:0002009!6.58e-09!65;CL:0000839!4.05e-08!70;CL:0002194!5.44e-08!63;CL:0000576!5.44e-08!63;CL:0000040!5.44e-08!63;CL:0000559!5.44e-08!63;CL:0000037!8.15e-08!172;CL:0000566!8.15e-08!172;CL:0000988!9.21e-08!182;CL:0000791!6.33e-07!18;CL:0000789!6.33e-07!18;CL:0002420!6.33e-07!18;CL:0002419!6.33e-07!18;CL:0000790!6.33e-07!18;CL:1000507!6.60e-07!12;CL:1000494!6.60e-07!12;CL:0000084!7.97e-07!25;CL:0000827!7.97e-07!25 | |ontology_enrichment_celltype=CL:0000738!5.30e-16!140;CL:0002057!1.03e-12!42;CL:0002087!6.11e-11!119;CL:0002031!6.83e-11!124;CL:0000860!1.13e-10!45;CL:0000557!3.32e-10!71;CL:0000766!7.13e-10!76;CL:0002009!6.58e-09!65;CL:0000839!4.05e-08!70;CL:0002194!5.44e-08!63;CL:0000576!5.44e-08!63;CL:0000040!5.44e-08!63;CL:0000559!5.44e-08!63;CL:0000037!8.15e-08!172;CL:0000566!8.15e-08!172;CL:0000988!9.21e-08!182;CL:0000791!6.33e-07!18;CL:0000789!6.33e-07!18;CL:0002420!6.33e-07!18;CL:0002419!6.33e-07!18;CL:0000790!6.33e-07!18;CL:1000507!6.60e-07!12;CL:1000494!6.60e-07!12;CL:0000084!7.97e-07!25;CL:0000827!7.97e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:1000507;7.01e-14;10!CL:1000494;7.01e-14;10!CL:1000449;6.57e-12;15!CL:1000497;3.99e-10;17!CL:0002518;3.99e-10;17!CL:0000624;1.27e-09;6!CL:0002681;6.86e-09;12!CL:0002584;6.86e-09;12!CL:0000084;1.00e-08;25!CL:0000791;1.36e-08;18!CL:0000789;1.36e-08;18!CL:0002419;1.36e-08;18!CL:0000860;2.20e-08;33!CL:0002057;2.20e-08;33!CL:0000766;2.70e-08;69!CL:0000453;6.64e-08;5!CL:0000451;7.19e-08;10!CL:0000576;1.08e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.28e-27,136;CL:0000988,5.10e-20,177;CL:0000037,3.61e-19,168;CL:0002031,1.75e-17,120;CL:0002087,2.16e-16,115;CL:0002032,3.81e-16,161;CL:0000837,3.81e-16,161;CL:0000766,4.11e-16,72;CL:0000557,2.45e-15,67;CL:1000507,6.21e-14,10;CL:1000494,6.21e-14,10;CL:0000860,2.34e-13,42;CL:0002057,2.34e-13,42;CL:0002009,1.33e-12,61;CL:0000839,3.34e-12,66;CL:0000473,6.36e-12,48;CL:0000234,6.36e-12,48;CL:0000763,6.46e-12,108;CL:0000049,6.46e-12,108;CL:1000449,6.87e-12,15;CL:0002194,6.98e-11,59;CL:0000576,6.98e-11,59;CL:0000040,6.98e-11,59;CL:0000559,6.98e-11,59;CL:1000497,4.14e-10,17;CL:0002518,4.14e-10,17;CL:0000624,7.33e-10,6;CL:0002681,8.22e-09,12;CL:0002584,8.22e-09,12;CL:0000084,1.10e-08,25;CL:0000827,1.10e-08,25;CL:0000791,1.30e-08,18;CL:0000789,1.30e-08,18;CL:0002420,1.30e-08,18;CL:0002419,1.30e-08,18;CL:0000790,1.30e-08,18;CL:0000134,4.08e-08,354;CL:0000451,6.87e-08,10;CL:0000453,8.07e-08,5;CL:0002320,1.42e-07,361;CL:0000219,1.56e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.11e-10;42!CL:0000790;1.36e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.67e-11!102;UBERON:0003061!8.67e-11!102;UBERON:0002371!2.75e-10!80;UBERON:0001474!3.46e-09!86;UBERON:0004765!8.03e-09!101;UBERON:0001434!8.03e-09!101;UBERON:0002193!1.01e-08!112;UBERON:0002405!5.13e-07!115;UBERON:0009773!6.60e-07!12;UBERON:0001231!6.60e-07!12;UBERON:0004810!6.60e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;7.01e-14;10!UBERON:0009773;7.01e-14;10!UBERON:0001231;7.01e-14;10!UBERON:0004810;7.01e-14;10!UBERON:0006555;6.57e-12;15!UBERON:0004819;6.57e-12;15!UBERON:0001285;6.57e-12;15!UBERON:0007684;6.57e-12;15!UBERON:0000353;3.88e-10;15!UBERON:0001225;6.86e-09;12!UBERON:0008987;6.86e-09;12!UBERON:0002113;1.10e-07;24!UBERON:0011143;1.10e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.02e-14,76;UBERON:0004810,6.21e-14,10;UBERON:0002390,4.41e-13,98;UBERON:0003061,4.41e-13,98;UBERON:0001474,1.28e-12,82;UBERON:0004211,6.87e-12,15;UBERON:0009773,6.87e-12,15;UBERON:0001231,6.87e-12,15;UBERON:0001285,6.87e-12,15;UBERON:0007684,6.87e-12,15;UBERON:0004208,6.87e-12,15;UBERON:0006555,6.09e-11,16;UBERON:0004819,6.09e-11,16;UBERON:0002193,7.80e-11,108;UBERON:0002405,8.58e-11,93;UBERON:0004765,1.27e-10,90;UBERON:0000353,4.31e-10,15;UBERON:0001225,8.22e-09,12;UBERON:0008987,8.22e-09,12;UBERON:0001434,1.28e-08,100;UBERON:0002384,1.33e-07,371;UBERON:0002113,7.86e-07,26;UBERON:0003918,7.86e-07,26;UBERON:0011143,7.86e-07,26;UBERON:0005095,7.86e-07,26;UBERON:0007687,7.86e-07,26 | |||
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| ||
|short_description=p4@ARL4C | |short_description=p4@ARL4C | ||
}} | }} |
Latest revision as of 01:23, 16 September 2015
Short description: | p4@ARL4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARL4C_5end |
Coexpression cluster: | C4201_immature_CD4_CD8_Natural_Mast_Basophils_Dendritic |
Association with transcript: | 23bp_to_NM_005737, uc002vvn.2_5end |
EntrezGene: | ARL4C |
HGNC: | 698 |
UniProt: | P56559 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.02e-14 | 76 |
nephron tubule epithelium | 6.21e-14 | 10 |
hematopoietic system | 4.41e-13 | 98 |
blood island | 4.41e-13 | 98 |
bone element | 1.28e-12 | 82 |
nephron epithelium | 6.87e-12 | 15 |
renal tubule | 6.87e-12 | 15 |
nephron tubule | 6.87e-12 | 15 |
nephron | 6.87e-12 | 15 |
uriniferous tubule | 6.87e-12 | 15 |
nephrogenic mesenchyme | 6.87e-12 | 15 |
excretory tube | 6.09e-11 | 16 |
kidney epithelium | 6.09e-11 | 16 |
hemolymphoid system | 7.80e-11 | 108 |
immune system | 8.58e-11 | 93 |
skeletal element | 1.27e-10 | 90 |
parenchyma | 4.31e-10 | 15 |
cortex of kidney | 8.22e-09 | 12 |
renal parenchyma | 8.22e-09 | 12 |
skeletal system | 1.28e-08 | 100 |
connective tissue | 1.33e-07 | 371 |
kidney | 7.86e-07 | 26 |
kidney mesenchyme | 7.86e-07 | 26 |
upper urinary tract | 7.86e-07 | 26 |
kidney rudiment | 7.86e-07 | 26 |
kidney field | 7.86e-07 | 26 |