FFCP PHASE1:Hg19::chr20:361369..361383,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57761 | |EntrezGene=57761 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16228 | |HGNC=16228 | ||
|TSSclassifier=strong | |||
|UniProt=Q96RU7 | |UniProt=Q96RU7 | ||
|association_with_transcript=61bp_to_NM_021158,uc002wdm.2_5end | |association_with_transcript=61bp_to_NM_021158,uc002wdm.2_5end | ||
|cluster_id=chr20:361369..361383,+ | |||
|coexpression_cluster_id=C2615 | |||
|description=CAGE_peak_7_at_TRIB3_5end | |description=CAGE_peak_7_at_TRIB3_5end | ||
|id=chr20:361369..361383,+ | |id=chr20:361369..361383,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.02e-48!254;CL:0000548!6.23e-19!679;CL:0000004!6.23e-19!679;CL:0000255!6.23e-19!679;CL:0000012!3.76e-18!682;CL:0000063!1.13e-13!578;CL:0000220!3.11e-13!246;CL:0002321!1.09e-12!248;CL:0000223!2.02e-12!59;CL:0000003!4.44e-11!722;CL:0000076!1.45e-08!62;CL:0002076!4.40e-08!43;CL:1000497!1.51e-07!18;CL:0002518!1.51e-07!18;CL:1000507!1.53e-07!12;CL:1000494!1.53e-07!12 | |ontology_enrichment_celltype=CL:0000066!1.02e-48!254;CL:0000548!6.23e-19!679;CL:0000004!6.23e-19!679;CL:0000255!6.23e-19!679;CL:0000012!3.76e-18!682;CL:0000063!1.13e-13!578;CL:0000220!3.11e-13!246;CL:0002321!1.09e-12!248;CL:0000223!2.02e-12!59;CL:0000003!4.44e-11!722;CL:0000076!1.45e-08!62;CL:0002076!4.40e-08!43;CL:1000497!1.51e-07!18;CL:0002518!1.51e-07!18;CL:1000507!1.53e-07!12;CL:1000494!1.53e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000497;1.59e-10;17!CL:0002518;1.59e-10;17!CL:1000507;1.78e-10;10!CL:1000494;1.78e-10;10!CL:0002368;5.88e-09;13!CL:1000449;1.14e-08;15!CL:0002202;4.63e-07;9!CL:0002632;4.63e-07;9!CL:0000182;5.96e-07;12!CL:0002076;7.58e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.91e-44,253;CL:0000223,1.38e-13,58;CL:1000497,1.23e-10,17;CL:0002518,1.23e-10,17;CL:1000507,2.17e-10,10;CL:1000494,2.17e-10,10;CL:0002076,7.02e-09,42;CL:1000449,8.90e-09,15;CL:0002368,1.06e-08,13;CL:0002321,7.54e-08,250;CL:0000076,4.74e-07,63;CL:0002202,7.26e-07,9;CL:0002632,7.26e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;5.91e-08;58!UBERON:0009497;8.44e-08;13 | |||
|ontology_enrichment_disease=DOID:305!3.72e-22!106;DOID:0050687!8.07e-21!143;DOID:162!3.06e-16!235;DOID:14566!3.33e-15!239;DOID:7!5.49e-10!39 | |ontology_enrichment_disease=DOID:305!3.72e-22!106;DOID:0050687!8.07e-21!143;DOID:162!3.06e-16!235;DOID:14566!3.33e-15!239;DOID:7!5.49e-10!39 | ||
|ontology_enrichment_disease_v019=DOID:7;4.92e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.08e-18,106;DOID:0050687,1.66e-16,143;DOID:162,2.22e-10,235;DOID:7,8.34e-10,39;DOID:14566,1.19e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.91e-18!169;UBERON:0000925!3.91e-18!169;UBERON:0006595!3.91e-18!169;UBERON:0005911!1.54e-14!82;UBERON:0003104!2.45e-14!238;UBERON:0009142!2.45e-14!238;UBERON:0000077!4.30e-14!130;UBERON:0001007!8.29e-14!155;UBERON:0001555!8.29e-14!155;UBERON:0007026!8.29e-14!155;UBERON:0002100!4.50e-13!216;UBERON:0000466!1.91e-12!126;UBERON:0009569!2.34e-12!113;UBERON:0001048!6.42e-12!168;UBERON:0001041!1.16e-11!98;UBERON:0004921!2.53e-11!129;UBERON:0004185!2.53e-11!129;UBERON:0005177!1.22e-10!107;UBERON:0003929!2.92e-10!54;UBERON:0000475!8.04e-10!365;UBERON:0005172!3.97e-09!55;UBERON:0005173!3.97e-09!55;UBERON:0000490!5.00e-09!138;UBERON:0002417!6.72e-09!61;UBERON:0000916!6.72e-09!61;UBERON:0000481!1.11e-08!347;UBERON:0006554!1.89e-08!44;UBERON:0009497!2.76e-08!25;UBERON:0000015!2.76e-08!25;UBERON:0002423!2.76e-08!25;UBERON:0006235!2.76e-08!25;UBERON:0004161!2.76e-08!25;UBERON:0005256!6.20e-08!143;UBERON:0001008!6.33e-08!45;UBERON:0008835!1.18e-07!22;UBERON:0003894!1.18e-07!22;UBERON:0001004!1.35e-07!72;UBERON:0002365!1.38e-07!31;UBERON:0002330!1.38e-07!31;UBERON:0007499!1.41e-07!25;UBERON:0009773!1.53e-07!12;UBERON:0001231!1.53e-07!12;UBERON:0004810!1.53e-07!12;UBERON:0000119!2.28e-07!312;UBERON:0000464!2.36e-07!104;UBERON:0000483!4.69e-07!309;UBERON:0000065!6.43e-07!53;UBERON:0009854!6.58e-07!23;UBERON:0009856!6.80e-07!26;UBERON:0000072!8.19e-07!46;UBERON:0002530!8.29e-07!59 | |ontology_enrichment_uberon=UBERON:0004119!3.91e-18!169;UBERON:0000925!3.91e-18!169;UBERON:0006595!3.91e-18!169;UBERON:0005911!1.54e-14!82;UBERON:0003104!2.45e-14!238;UBERON:0009142!2.45e-14!238;UBERON:0000077!4.30e-14!130;UBERON:0001007!8.29e-14!155;UBERON:0001555!8.29e-14!155;UBERON:0007026!8.29e-14!155;UBERON:0002100!4.50e-13!216;UBERON:0000466!1.91e-12!126;UBERON:0009569!2.34e-12!113;UBERON:0001048!6.42e-12!168;UBERON:0001041!1.16e-11!98;UBERON:0004921!2.53e-11!129;UBERON:0004185!2.53e-11!129;UBERON:0005177!1.22e-10!107;UBERON:0003929!2.92e-10!54;UBERON:0000475!8.04e-10!365;UBERON:0005172!3.97e-09!55;UBERON:0005173!3.97e-09!55;UBERON:0000490!5.00e-09!138;UBERON:0002417!6.72e-09!61;UBERON:0000916!6.72e-09!61;UBERON:0000481!1.11e-08!347;UBERON:0006554!1.89e-08!44;UBERON:0009497!2.76e-08!25;UBERON:0000015!2.76e-08!25;UBERON:0002423!2.76e-08!25;UBERON:0006235!2.76e-08!25;UBERON:0004161!2.76e-08!25;UBERON:0005256!6.20e-08!143;UBERON:0001008!6.33e-08!45;UBERON:0008835!1.18e-07!22;UBERON:0003894!1.18e-07!22;UBERON:0001004!1.35e-07!72;UBERON:0002365!1.38e-07!31;UBERON:0002330!1.38e-07!31;UBERON:0007499!1.41e-07!25;UBERON:0009773!1.53e-07!12;UBERON:0001231!1.53e-07!12;UBERON:0004810!1.53e-07!12;UBERON:0000119!2.28e-07!312;UBERON:0000464!2.36e-07!104;UBERON:0000483!4.69e-07!309;UBERON:0000065!6.43e-07!53;UBERON:0009854!6.58e-07!23;UBERON:0009856!6.80e-07!26;UBERON:0000072!8.19e-07!46;UBERON:0002530!8.29e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;3.20e-11;25!UBERON:0004211;1.78e-10;10!UBERON:0009773;1.78e-10;10!UBERON:0001231;1.78e-10;10!UBERON:0004810;1.78e-10;10!UBERON:0006554;4.38e-10;30!UBERON:0001008;4.38e-10;30!UBERON:0002365;8.36e-10;31!UBERON:0002330;8.36e-10;31!UBERON:0005172;5.49e-09;52!UBERON:0005173;5.49e-09;52!UBERON:0006555;1.14e-08;15!UBERON:0004819;1.14e-08;15!UBERON:0001285;1.14e-08;15!UBERON:0007684;1.14e-08;15!UBERON:0002107;1.33e-08;19!UBERON:0006925;1.33e-08;19!UBERON:0002113;4.12e-07;24!UBERON:0011143;4.12e-07;24!UBERON:0000353;5.69e-07;15!UBERON:0002417;7.29e-07;58!UBERON:0000916;7.29e-07;58 | |||
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|short_description=p7@TRIB3 | |short_description=p7@TRIB3 | ||
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Latest revision as of 01:27, 16 September 2015
Short description: | p7@TRIB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TRIB3_5end |
Coexpression cluster: | C2615_Alveolar_Renal_Urothelial_Tracheal_Keratinocyte_renal_Trabecular |
Association with transcript: | 61bp_to_NM_021158, uc002wdm.2_5end |
EntrezGene: | TRIB3 |
HGNC: | 16228 |
UniProt: | Q96RU7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.91e-44 | 253 |
endodermal cell | 1.38e-13 | 58 |
kidney cell | 1.23e-10 | 17 |
kidney epithelial cell | 1.23e-10 | 17 |
kidney tubule cell | 2.17e-10 | 10 |
nephron tubule epithelial cell | 2.17e-10 | 10 |
endo-epithelial cell | 7.02e-09 | 42 |
epithelial cell of nephron | 8.90e-09 | 15 |
respiratory epithelial cell | 1.06e-08 | 13 |
embryonic cell | 7.54e-08 | 250 |
squamous epithelial cell | 4.74e-07 | 63 |
epithelial cell of tracheobronchial tree | 7.26e-07 | 9 |
epithelial cell of lower respiratory tract | 7.26e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.08e-18 | 106 |
cell type cancer | 1.66e-16 | 143 |
cancer | 2.22e-10 | 235 |
disease of anatomical entity | 8.34e-10 | 39 |
disease of cellular proliferation | 1.19e-09 | 239 |