FFCP PHASE1:Hg19::chr11:118900114..118900127,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:118900114..118900127,- to FFCP PHASE1:Hg19::chr11:118900114..118900127,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4061 | |HGNC=4061 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_ENST00000529510_5end | |||
|cluster_id=chr11:118900114..118900127,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_4_at_SLC37A4_5end | |||
|id=chr11:118900114..118900127,- | |||
|ontology_enrichment_celltype=CL:0000181!6.13e-07!12;CL:0000417!6.13e-07!12;CL:0000668!6.13e-07!12;CL:0000414!6.13e-07!12;CL:0000412!6.13e-07!12;CL:0000182!6.13e-07!12;CL:0000235!6.45e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000235;7.59e-32;6!CL:0002619;4.47e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,9.47e-32,6;CL:0002619,4.55e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.10e-11;2!UBERON:0005754;7.82e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!2.51e-13!55;UBERON:0005173!2.51e-13!55;UBERON:0007023!5.70e-13!115;UBERON:0002417!2.41e-11!61;UBERON:0000916!2.41e-11!61;UBERON:0005057!1.22e-10!26;UBERON:0002107!2.70e-08!19;UBERON:0006925!2.70e-08!19;UBERON:0008836!2.70e-08!19;UBERON:0009497!4.18e-07!25;UBERON:0000015!4.18e-07!25;UBERON:0002423!4.18e-07!25;UBERON:0006235!4.18e-07!25;UBERON:0004161!4.18e-07!25;UBERON:0006947!4.67e-07!3;UBERON:0004054!4.67e-07!3;UBERON:0008835!7.52e-07!22;UBERON:0003894!7.52e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;8.12e-17;3!UBERON:0004054;8.12e-17;3!UBERON:0005904;9.49e-13;4!UBERON:0002108;6.14e-11;4!UBERON:0003135;5.91e-08;11!UBERON:0002423;2.07e-07;25!UBERON:0002107;3.73e-07;19!UBERON:0006925;3.73e-07;19!UBERON:0001000;7.82e-07;1!UBERON:0000998;7.82e-07;1!UBERON:0006868;7.82e-07;1!UBERON:0005352;7.82e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,4.11e-17,3;UBERON:0004054,4.11e-17,3;UBERON:0005904,5.71e-13,4;UBERON:0005172,2.96e-12,54;UBERON:0005173,2.96e-12,54;UBERON:0004876,7.99e-12,11;UBERON:0002108,7.38e-11,4;UBERON:0002417,8.57e-11,60;UBERON:0000916,8.57e-11,60;UBERON:0000080,1.31e-09,9;UBERON:0002120,1.31e-09,9;UBERON:0004875,1.31e-09,9;UBERON:0005721,1.31e-09,9;UBERON:0005754,1.31e-09,9;UBERON:0007297,1.31e-09,9;UBERON:0003135,4.72e-08,11;UBERON:0009497,1.73e-07,25;UBERON:0000015,1.73e-07,25;UBERON:0002423,1.73e-07,25;UBERON:0006235,1.73e-07,25;UBERON:0004161,1.73e-07,25;UBERON:0003887,3.12e-07,12;UBERON:0002107,3.29e-07,19;UBERON:0006925,3.29e-07,19;UBERON:0008836,3.29e-07,19;UBERON:0000998,5.26e-07,1;UBERON:0006868,5.26e-07,1;UBERON:0002113,5.36e-07,26;UBERON:0003918,5.36e-07,26;UBERON:0011143,5.36e-07,26;UBERON:0005095,5.36e-07,26;UBERON:0007687,5.36e-07,26;UBERON:0001000,6.60e-07,1;UBERON:0005352,6.60e-07,1;UBERON:0000058,7.58e-07,19 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56740831967947,0.647787332037959,2.31818010870768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22820913770347,0,0,0.270803863765016,2.17755243533648,0.650296737799391,0,0,0,0,0,0,1.0197840842781,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,6.09052701064364,0,0,1.29818957461873,0.696518949197069,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,5.07020139287323,2.94848165003288,2.95394953340702,0,0.491953754172454,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,2.95460407304877,1.8720341211139,1.33768046059855,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,2.00902836572851,2.10833939483032,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,1.54227252690289,0.541892875087706,1.00337954770971,0,0,0,0,0.261435451024901,0,0,0,2.67906630284078,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,3.20088922641049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0.962059999958153,0,0.227586896570999,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0,7.34197785377715,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,2.76209081994573,2.41981432097328,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0,0,0,0,0,0,0,0,1.92107695265417,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0.236349546921671,0.329663433524666,0.202210631562555,0.295282444544246,0,0,0,0,0,0,0.2249738915515,0,0.121499113316049,0,5.91042804743986,3.51445740504487,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22414914091781,2.65013777824443,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,1.03328987796489,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0.138314504928436,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,1.48863353516788,0,0,0,0,0,0,0.266107110487916,0,0,0.0679697329768317,0.131545547125698,0,0,0.470958557103084,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,2.9637093513365,0,0,0,0,0.098150233615243,8.65617267374113,0,0.410651227424988,0,0,0,0,0,0,0,0,18.7533204202306,7.21246549663059,0,0,0,0.196308467114945,0.297046400327086,0,0,0.469919589899268,0.193373663920732,0,0,0,0,0,0,0,0,0,0,2.1161073620616,0,0,0,0,0.218531143927391,0.126698501011437,0,0,0,0,0.227336094654718,0,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56740831967947,0.647787332037959,2.31818010870768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22820913770347,0,0,0.270803863765016,2.17755243533648,0.650296737799391,0,0,0,0,0,0,1.0197840842781,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,6.09052701064364,0,0,1.29818957461873,0.696518949197069,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,5.07020139287323,2.94848165003288,2.95394953340702,0,0.491953754172454,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,2.95460407304877,1.8720341211139,1.33768046059855,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,2.00902836572851,2.10833939483032,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,1.54227252690289,0.541892875087706,1.00337954770971,0,0,0,0,0.261435451024901,0,0,0,2.67906630284078,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,3.20088922641049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0.962059999958153,0,0.227586896570999,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0,7.34197785377715,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,2.76209081994573,2.41981432097328,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0,0,0,0,0,0,0,0,1.92107695265417,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0.236349546921671,0.329663433524666,0.202210631562555,0.295282444544246,0,0,0,0,0,0,0.2249738915515,0,0.121499113316049,0,5.91042804743986,3.51445740504487,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22414914091781,2.65013777824443,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,1.03328987796489,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0.138314504928436,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,1.48863353516788,0,0,0,0,0,0,0.266107110487916,0,0,0.0679697329768317,0.131545547125698,0,0,0.470958557103084,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,2.9637093513365,0,0,0,0,0.098150233615243,8.65617267374113,0,0.410651227424988,0,0,0,0,0,0,0,0,18.7533204202306,7.21246549663059,0,0,0,0.196308467114945,0.297046400327086,0,0,0.469919589899268,0.193373663920732,0,0,0,0,0,0,0,0,0,0,2.1161073620616,0,0,0,0,0.218531143927391,0.126698501011437,0,0,0,0,0.227336094654718,0,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p4@SLC37A4 | |||
}} | }} |
Latest revision as of 02:19, 16 September 2015
Short description: | p4@SLC37A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC37A4_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -17bp_to_ENST00000529510_5end |
EntrezGene: | NA |
HGNC: | 4061 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 9.47e-32 | 6 |
adult endothelial progenitor cell | 4.55e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 4.11e-17 | 3 |
internal male genitalia | 4.11e-17 | 3 |
duct of male reproductive system | 5.71e-13 | 4 |
abdomen element | 2.96e-12 | 54 |
abdominal segment element | 2.96e-12 | 54 |
urogenital ridge | 7.99e-12 | 11 |
small intestine | 7.38e-11 | 4 |
abdominal segment of trunk | 8.57e-11 | 60 |
abdomen | 8.57e-11 | 60 |
mesonephros | 1.31e-09 | 9 |
pronephros | 1.31e-09 | 9 |
nephrogenic cord | 1.31e-09 | 9 |
pronephric mesoderm | 1.31e-09 | 9 |
rostral part of nephrogenic cord | 1.31e-09 | 9 |
presumptive pronephric mesoderm | 1.31e-09 | 9 |
male reproductive organ | 4.72e-08 | 11 |
epithelium of foregut-midgut junction | 1.73e-07 | 25 |
anatomical boundary | 1.73e-07 | 25 |
hepatobiliary system | 1.73e-07 | 25 |
foregut-midgut junction | 1.73e-07 | 25 |
septum transversum | 1.73e-07 | 25 |
intraembryonic coelom | 3.12e-07 | 12 |
liver | 3.29e-07 | 19 |
digestive gland | 3.29e-07 | 19 |
liver bud | 3.29e-07 | 19 |
seminal vesicle | 5.26e-07 | 1 |
seminal fluid secreting gland | 5.26e-07 | 1 |
kidney | 5.36e-07 | 26 |
kidney mesenchyme | 5.36e-07 | 26 |
upper urinary tract | 5.36e-07 | 26 |
kidney rudiment | 5.36e-07 | 26 |
kidney field | 5.36e-07 | 26 |
vas deferens | 6.60e-07 | 1 |
spermatic cord | 6.60e-07 | 1 |
duct | 7.58e-07 | 19 |