FFCP PHASE1:Hg19::chr16:29757389..29757400,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283897 | |EntrezGene=283897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26649 | |HGNC=26649 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UWD8 | |UniProt=Q6UWD8 | ||
|association_with_transcript=-49bp_to_NM_175900,uc002dtp.2_5end | |association_with_transcript=-49bp_to_NM_175900,uc002dtp.2_5end | ||
|cluster_id=chr16:29757389..29757400,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_2_at_C16orf54_5end | |description=CAGE_peak_2_at_C16orf54_5end | ||
|id=chr16:29757389..29757400,- | |id=chr16:29757389..29757400,- | ||
|ontology_enrichment_celltype=CL:0000037!1.07e-69!172;CL:0000566!1.07e-69!172;CL:0002032!1.03e-64!165;CL:0000837!1.03e-64!165;CL:0000988!1.24e-63!182;CL:0000738!1.04e-58!140;CL:0002031!6.65e-49!124;CL:0002087!6.48e-48!119;CL:0000763!5.06e-36!112;CL:0000049!5.06e-36!112;CL:0000766!9.25e-31!76;CL:0000838!3.96e-26!52;CL:0000542!2.34e-25!53;CL:0000051!2.34e-25!53;CL:0000839!4.54e-23!70;CL:0000557!7.94e-23!71;CL:0000084!2.16e-21!25;CL:0000827!2.16e-21!25;CL:0002057!4.13e-21!42;CL:0000791!7.36e-21!18;CL:0000789!7.36e-21!18;CL:0002420!7.36e-21!18;CL:0002419!7.36e-21!18;CL:0000790!7.36e-21!18;CL:0002194!2.71e-19!63;CL:0000576!2.71e-19!63;CL:0000040!2.71e-19!63;CL:0000559!2.71e-19!63;CL:0000860!6.23e-19!45;CL:0002009!2.77e-18!65;CL:0000134!4.76e-15!358;CL:0000625!2.75e-14!11;CL:0002320!4.07e-14!365;CL:0000219!2.73e-11!390;CL:0000094!1.26e-10!8;CL:0000236!4.90e-08!14;CL:0000048!6.25e-08!430;CL:0000034!7.75e-08!444;CL:0000723!1.99e-07!436;CL:0000624!2.89e-07!6;CL:0000081!4.35e-07!11 | |ontology_enrichment_celltype=CL:0000037!1.07e-69!172;CL:0000566!1.07e-69!172;CL:0002032!1.03e-64!165;CL:0000837!1.03e-64!165;CL:0000988!1.24e-63!182;CL:0000738!1.04e-58!140;CL:0002031!6.65e-49!124;CL:0002087!6.48e-48!119;CL:0000763!5.06e-36!112;CL:0000049!5.06e-36!112;CL:0000766!9.25e-31!76;CL:0000838!3.96e-26!52;CL:0000542!2.34e-25!53;CL:0000051!2.34e-25!53;CL:0000839!4.54e-23!70;CL:0000557!7.94e-23!71;CL:0000084!2.16e-21!25;CL:0000827!2.16e-21!25;CL:0002057!4.13e-21!42;CL:0000791!7.36e-21!18;CL:0000789!7.36e-21!18;CL:0002420!7.36e-21!18;CL:0002419!7.36e-21!18;CL:0000790!7.36e-21!18;CL:0002194!2.71e-19!63;CL:0000576!2.71e-19!63;CL:0000040!2.71e-19!63;CL:0000559!2.71e-19!63;CL:0000860!6.23e-19!45;CL:0002009!2.77e-18!65;CL:0000134!4.76e-15!358;CL:0000625!2.75e-14!11;CL:0002320!4.07e-14!365;CL:0000219!2.73e-11!390;CL:0000094!1.26e-10!8;CL:0000236!4.90e-08!14;CL:0000048!6.25e-08!430;CL:0000034!7.75e-08!444;CL:0000723!1.99e-07!436;CL:0000624!2.89e-07!6;CL:0000081!4.35e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.45e-36;18!CL:0000789;4.45e-36;18!CL:0002419;4.45e-36;18!CL:0000084;2.80e-30;25!CL:0000625;3.13e-24;11!CL:0000542;2.72e-19;53!CL:0000094;9.43e-18;8!CL:0000081;1.96e-12;11!CL:0000624;9.78e-12;6!CL:0002087;7.59e-10;104!CL:0000236;7.52e-09;13!CL:0000738;2.09e-08;136!CL:0000775;5.66e-08;3!CL:0000623;1.98e-07;3!CL:0000767;4.74e-07;3!CL:0000860;9.87e-07;33!CL:0002057;9.87e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.50e-39,136;CL:0000037,2.93e-37,168;CL:0000791,7.68e-36,18;CL:0000789,7.68e-36,18;CL:0002420,7.68e-36,18;CL:0002419,7.68e-36,18;CL:0000790,7.68e-36,18;CL:0000988,1.82e-34,177;CL:0002032,7.99e-34,161;CL:0000837,7.99e-34,161;CL:0000838,2.91e-31,52;CL:0000542,1.71e-30,53;CL:0000051,1.71e-30,53;CL:0000084,4.49e-30,25;CL:0000827,4.49e-30,25;CL:0002087,5.04e-28,115;CL:0002031,1.04e-27,120;CL:0000625,3.92e-24,11;CL:0000094,1.25e-17,8;CL:0000081,2.38e-12,11;CL:0000766,7.82e-12,72;CL:0000624,1.11e-11,6;CL:0000763,1.27e-09,108;CL:0000049,1.27e-09,108;CL:0000134,1.85e-09,354;CL:0002320,5.67e-09,361;CL:0000236,4.42e-08,14;CL:0000775,5.02e-08,3;CL:0000623,2.03e-07,3;CL:0000825,2.03e-07,3;CL:0000219,2.72e-07,386;CL:0000767,6.92e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;4.45e-36;18!CL:0000051;2.72e-19;53 | |||
|ontology_enrichment_disease=DOID:1240!4.79e-11!39;DOID:8692!2.28e-09!31;DOID:2531!3.69e-08!51;DOID:0060083!3.69e-08!51 | |ontology_enrichment_disease=DOID:1240!4.79e-11!39;DOID:8692!2.28e-09!31;DOID:2531!3.69e-08!51;DOID:0060083!3.69e-08!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.91e-33!102;UBERON:0003061!6.91e-33!102;UBERON:0002193!2.44e-30!112;UBERON:0002371!1.23e-19!80;UBERON:0001474!3.50e-17!86;UBERON:0002405!4.97e-16!115;UBERON:0002384!2.81e-13!375;UBERON:0004765!1.95e-12!101;UBERON:0001434!1.95e-12!101;UBERON:0000178!2.14e-11!15;UBERON:0000179!2.14e-11!15;UBERON:0000463!2.14e-11!15 | |ontology_enrichment_uberon=UBERON:0002390!6.91e-33!102;UBERON:0003061!6.91e-33!102;UBERON:0002193!2.44e-30!112;UBERON:0002371!1.23e-19!80;UBERON:0001474!3.50e-17!86;UBERON:0002405!4.97e-16!115;UBERON:0002384!2.81e-13!375;UBERON:0004765!1.95e-12!101;UBERON:0001434!1.95e-12!101;UBERON:0000178!2.14e-11!15;UBERON:0000179!2.14e-11!15;UBERON:0000463!2.14e-11!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.39e-20;15!UBERON:0000179;6.39e-20;15!UBERON:0000463;6.39e-20;15!UBERON:0002390;1.29e-12;32!UBERON:0002193;2.11e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.19e-20,15;UBERON:0000179,4.19e-20,15;UBERON:0000463,4.19e-20,15;UBERON:0002390,4.67e-17,98;UBERON:0003061,4.67e-17,98;UBERON:0002193,1.02e-16,108;UBERON:0002384,2.57e-08,371;UBERON:0002405,3.68e-07,93 | |||
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|short_description=p2@C16orf54 | |short_description=p2@C16orf54 | ||
}} | }} |
Latest revision as of 03:14, 16 September 2015
Short description: | p2@C16orf54 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C16orf54_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | -49bp_to_NM_175900, uc002dtp.2_5end |
EntrezGene: | C16orf54 |
HGNC: | 26649 |
UniProt: | Q6UWD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.50e-39 | 136 |
hematopoietic stem cell | 2.93e-37 | 168 |
mature alpha-beta T cell | 7.68e-36 | 18 |
alpha-beta T cell | 7.68e-36 | 18 |
immature T cell | 7.68e-36 | 18 |
mature T cell | 7.68e-36 | 18 |
immature alpha-beta T cell | 7.68e-36 | 18 |
hematopoietic cell | 1.82e-34 | 177 |
hematopoietic oligopotent progenitor cell | 7.99e-34 | 161 |
hematopoietic multipotent progenitor cell | 7.99e-34 | 161 |
lymphoid lineage restricted progenitor cell | 2.91e-31 | 52 |
lymphocyte | 1.71e-30 | 53 |
common lymphoid progenitor | 1.71e-30 | 53 |
T cell | 4.49e-30 | 25 |
pro-T cell | 4.49e-30 | 25 |
nongranular leukocyte | 5.04e-28 | 115 |
hematopoietic lineage restricted progenitor cell | 1.04e-27 | 120 |
CD8-positive, alpha-beta T cell | 3.92e-24 | 11 |
granulocyte | 1.25e-17 | 8 |
blood cell | 2.38e-12 | 11 |
myeloid leukocyte | 7.82e-12 | 72 |
CD4-positive, alpha-beta T cell | 1.11e-11 | 6 |
myeloid cell | 1.27e-09 | 108 |
common myeloid progenitor | 1.27e-09 | 108 |
mesenchymal cell | 1.85e-09 | 354 |
connective tissue cell | 5.67e-09 | 361 |
B cell | 4.42e-08 | 14 |
neutrophil | 5.02e-08 | 3 |
natural killer cell | 2.03e-07 | 3 |
pro-NK cell | 2.03e-07 | 3 |
motile cell | 2.72e-07 | 386 |
basophil | 6.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 4.19e-20 | 15 |
haemolymphatic fluid | 4.19e-20 | 15 |
organism substance | 4.19e-20 | 15 |
hematopoietic system | 4.67e-17 | 98 |
blood island | 4.67e-17 | 98 |
hemolymphoid system | 1.02e-16 | 108 |
connective tissue | 2.57e-08 | 371 |
immune system | 3.68e-07 | 93 |