FFCP PHASE1:Hg19::chr4:153332886..153332907,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55294 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16712 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=47bp_to_HQ258348_5end | |||
|cluster_id=chr4:153332886..153332907,- | |||
|description=CAGE_peak_7_at_FBXW7_5end | |||
|id=chr4:153332886..153332907,- | |||
|ontology_enrichment_celltype=CL:0002087!4.23e-12!119;CL:0002057!3.73e-11!42;CL:0002031!2.23e-10!124;CL:0000860!2.26e-10!45;CL:0000037!2.85e-10!172;CL:0000566!2.85e-10!172;CL:0000738!3.86e-10!140;CL:0002032!9.83e-10!165;CL:0000837!9.83e-10!165;CL:0000988!1.50e-09!182;CL:0000839!2.59e-07!70;CL:0002194!3.91e-07!63;CL:0000576!3.91e-07!63;CL:0000040!3.91e-07!63;CL:0000559!3.91e-07!63;CL:0000766!6.46e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.56e-12;33!CL:0002057;2.56e-12;33!CL:0000473;7.26e-11;39!CL:0000234;7.26e-11;39!CL:0000576;3.10e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,7.79e-14,115;CL:0000473,1.15e-12,48;CL:0000234,1.15e-12,48;CL:0000860,3.03e-12,42;CL:0002057,3.03e-12,42;CL:0000738,1.27e-11,136;CL:0000037,7.41e-10,168;CL:0002031,9.02e-10,120;CL:0000988,1.41e-09,177;CL:0002032,3.86e-09,161;CL:0000837,3.86e-09,161;CL:0002194,1.68e-08,59;CL:0000576,1.68e-08,59;CL:0000040,1.68e-08,59;CL:0000559,1.68e-08,59;CL:0002009,5.57e-08,61;CL:0000766,7.72e-08,72;CL:0000839,7.75e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;1.96e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.76e-22!115;UBERON:0002390!2.32e-09!102;UBERON:0003061!2.32e-09!102;UBERON:0002193!2.84e-08!112;UBERON:0001049!3.93e-07!57;UBERON:0005068!3.93e-07!57;UBERON:0006241!3.93e-07!57;UBERON:0007135!3.93e-07!57;UBERON:0002780!9.85e-07!41;UBERON:0001890!9.85e-07!41;UBERON:0006240!9.85e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.73e-12;15!UBERON:0000179;5.73e-12;15!UBERON:0000463;5.73e-12;15!UBERON:0001893;3.64e-10;34!UBERON:0003528;7.87e-10;34!UBERON:0002020;7.87e-10;34!UBERON:0002780;1.15e-09;41!UBERON:0001890;1.15e-09;41!UBERON:0002619;1.51e-09;22!UBERON:0000073;2.21e-09;53!UBERON:0002616;2.21e-09;53!UBERON:0001869;4.73e-09;32!UBERON:0002791;7.86e-09;32!UBERON:0001950;4.99e-08;20!UBERON:0000956;6.11e-08;25!UBERON:0000203;6.11e-08;25!UBERON:0007023;8.00e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.85e-24,114;UBERON:0000073,4.67e-14,53;UBERON:0002616,4.67e-14,53;UBERON:0002780,8.81e-14,41;UBERON:0001890,8.81e-14,41;UBERON:0003080,8.81e-14,41;UBERON:0006240,8.81e-14,41;UBERON:0001049,8.32e-13,56;UBERON:0005068,8.32e-13,56;UBERON:0006241,8.32e-13,56;UBERON:0007135,8.32e-13,56;UBERON:0001893,4.83e-12,34;UBERON:0000178,5.93e-12,15;UBERON:0000179,5.93e-12,15;UBERON:0000463,5.93e-12,15;UBERON:0003528,7.24e-12,34;UBERON:0002020,7.24e-12,34;UBERON:0002390,2.25e-11,98;UBERON:0003061,2.25e-11,98;UBERON:0002791,8.17e-11,32;UBERON:0001869,8.72e-11,32;UBERON:0000955,1.89e-10,68;UBERON:0006238,1.89e-10,68;UBERON:0002193,5.33e-10,108;UBERON:0002619,6.10e-10,22;UBERON:0001950,2.56e-08,20;UBERON:0000956,2.83e-08,25;UBERON:0000203,2.83e-08,25;UBERON:0001017,5.05e-08,81;UBERON:0001016,2.27e-07,89;UBERON:0000200,3.97e-07,6;UBERON:0003056,7.01e-07,61 | |||
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| |||
|short_description=p7@FBXW7 | |||
}} |
Latest revision as of 03:19, 16 September 2015
Short description: | p7@FBXW7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FBXW7_5end |
Coexpression cluster: | NA |
Association with transcript: | 47bp_to_HQ258348_5end |
EntrezGene: | FBXW7 |
HGNC: | 16712 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 7.79e-14 | 115 |
defensive cell | 1.15e-12 | 48 |
phagocyte | 1.15e-12 | 48 |
classical monocyte | 3.03e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.03e-12 | 42 |
leukocyte | 1.27e-11 | 136 |
hematopoietic stem cell | 7.41e-10 | 168 |
hematopoietic lineage restricted progenitor cell | 9.02e-10 | 120 |
hematopoietic cell | 1.41e-09 | 177 |
hematopoietic oligopotent progenitor cell | 3.86e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.86e-09 | 161 |
monopoietic cell | 1.68e-08 | 59 |
monocyte | 1.68e-08 | 59 |
monoblast | 1.68e-08 | 59 |
promonocyte | 1.68e-08 | 59 |
macrophage dendritic cell progenitor | 5.57e-08 | 61 |
myeloid leukocyte | 7.72e-08 | 72 |
myeloid lineage restricted progenitor cell | 7.75e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.85e-24 | 114 |
regional part of nervous system | 4.67e-14 | 53 |
regional part of brain | 4.67e-14 | 53 |
regional part of forebrain | 8.81e-14 | 41 |
forebrain | 8.81e-14 | 41 |
anterior neural tube | 8.81e-14 | 41 |
future forebrain | 8.81e-14 | 41 |
neural tube | 8.32e-13 | 56 |
neural rod | 8.32e-13 | 56 |
future spinal cord | 8.32e-13 | 56 |
neural keel | 8.32e-13 | 56 |
telencephalon | 4.83e-12 | 34 |
blood | 5.93e-12 | 15 |
haemolymphatic fluid | 5.93e-12 | 15 |
organism substance | 5.93e-12 | 15 |
brain grey matter | 7.24e-12 | 34 |
gray matter | 7.24e-12 | 34 |
hematopoietic system | 2.25e-11 | 98 |
blood island | 2.25e-11 | 98 |
regional part of telencephalon | 8.17e-11 | 32 |
cerebral hemisphere | 8.72e-11 | 32 |
brain | 1.89e-10 | 68 |
future brain | 1.89e-10 | 68 |
hemolymphoid system | 5.33e-10 | 108 |
regional part of cerebral cortex | 6.10e-10 | 22 |
neocortex | 2.56e-08 | 20 |
cerebral cortex | 2.83e-08 | 25 |
pallium | 2.83e-08 | 25 |
central nervous system | 5.05e-08 | 81 |
nervous system | 2.27e-07 | 89 |
gyrus | 3.97e-07 | 6 |
pre-chordal neural plate | 7.01e-07 | 61 |