FFCP PHASE1:Hg19::chr16:29831757..29831802,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:29831757..29831802,+ to FFCP PHASE1:Hg19::chr16:29831757..29831802,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9961 | |EntrezGene=9961 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7531 | |HGNC=7531 | ||
|TSSclassifier=strong | |||
|UniProt=Q14764,B4DVL1 | |UniProt=Q14764,B4DVL1 | ||
|association_with_transcript=0bp_to_ENST00000395353,ENST00000452209,uc002dui.2,uc002duj.2,uc010bzh.1,uc010vdz.1_5end | |||
|cluster_id=chr16:29831757..29831802,+ | |||
|description=CAGE_peak_1_at_MVP_5end | |||
|id=chr16:29831757..29831802,+ | |||
|ontology_enrichment_celltype=CL:0002371!7.51e-28!591;CL:0000144!1.76e-25!625;CL:0000055!1.99e-25!180;CL:0000222!5.69e-25!119;CL:0000183!2.06e-21!59;CL:0000680!5.13e-19!57;CL:0000056!5.13e-19!57;CL:0000355!5.13e-19!57;CL:0000187!1.34e-18!54;CL:0000192!4.17e-18!42;CL:0000514!4.17e-18!42;CL:0000003!8.30e-18!722;CL:0000548!1.00e-17!679;CL:0000004!1.00e-17!679;CL:0000255!1.00e-17!679;CL:0000012!8.14e-17!682;CL:0000057!3.51e-16!75;CL:0000220!1.59e-15!246;CL:0002321!1.29e-14!248;CL:0000359!7.57e-14!32;CL:0000393!4.18e-13!60;CL:0000211!4.18e-13!60;CL:0000048!5.83e-13!430;CL:0000723!2.16e-12!436;CL:0000034!4.05e-10!444;CL:0000213!6.59e-07!57;CL:0000215!6.59e-07!57;CL:0002620!7.06e-07!23;CL:1000497!8.06e-07!18;CL:0002518!8.06e-07!18;CL:1000449!8.09e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.72e-13;43!CL:0000359;2.62e-13;32!CL:0000187;2.06e-10;55!CL:0000393;2.27e-07;61!CL:0000211;2.27e-07;61!CL:0002620;7.16e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.94e-26,121;CL:0000680,1.46e-19,58;CL:0000056,1.46e-19,58;CL:0000355,1.46e-19,58;CL:0000187,3.83e-19,55;CL:0000192,1.15e-18,43;CL:0000514,1.15e-18,43;CL:0000057,3.38e-16,76;CL:0002321,2.87e-15,250;CL:0000359,7.56e-14,32;CL:0000048,9.55e-14,427;CL:0000393,1.22e-13,61;CL:0000211,1.22e-13,61;CL:0000723,3.96e-13,433;CL:0000034,9.12e-11,441;CL:0000213,3.06e-07,58;CL:0000215,3.06e-07,58;CL:0002620,7.05e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;1.72e-13;43!CL:0000355;2.54e-10;58!CL:0000222;4.09e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.24e-20!83;UBERON:0002329!2.24e-20!83;UBERON:0003077!2.24e-20!83;UBERON:0003059!2.24e-20!83;UBERON:0007282!2.24e-20!83;UBERON:0009618!2.24e-20!83;UBERON:0007285!2.24e-20!83;UBERON:0004535!1.16e-18!110;UBERON:0004290!1.79e-18!70;UBERON:0000486!2.08e-18!82;UBERON:0002049!7.62e-18!79;UBERON:0007798!7.62e-18!79;UBERON:0001009!1.55e-17!113;UBERON:0005256!2.22e-17!143;UBERON:0001134!2.11e-16!61;UBERON:0002036!2.11e-16!61;UBERON:0003082!2.11e-16!61;UBERON:0002385!2.14e-16!63;UBERON:0001015!2.14e-16!63;UBERON:0000383!2.14e-16!63;UBERON:0001637!2.49e-16!42;UBERON:0003509!2.49e-16!42;UBERON:0004572!2.49e-16!42;UBERON:0003914!1.81e-15!118;UBERON:0000055!1.74e-14!69;UBERON:0001981!8.11e-14!60;UBERON:0007500!8.11e-14!60;UBERON:0004537!8.11e-14!60;UBERON:0006965!8.11e-14!60;UBERON:0003081!1.06e-13!216;UBERON:0000926!1.36e-13!448;UBERON:0004120!1.36e-13!448;UBERON:0006603!1.36e-13!448;UBERON:0004573!2.37e-13!33;UBERON:0004571!2.37e-13!33;UBERON:0004872!5.78e-13!84;UBERON:0002204!9.55e-13!167;UBERON:0002100!2.61e-11!216;UBERON:0000490!6.45e-11!138;UBERON:0000947!2.83e-08!21;UBERON:0010191!2.83e-08!21;UBERON:0003104!3.71e-07!238;UBERON:0009142!3.71e-07!238;UBERON:0004211!8.09e-07!16;UBERON:0001285!8.09e-07!16;UBERON:0007684!8.09e-07!16;UBERON:0003220!8.09e-07!16;UBERON:0004208!8.09e-07!16;UBERON:0000467!8.83e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.92e-12;33!UBERON:0004571;2.92e-12;33!UBERON:0001637;7.27e-12;42!UBERON:0003509;7.27e-12;42!UBERON:0004572;7.27e-12;42!UBERON:0007500;8.36e-09;56!UBERON:0001981;8.36e-09;56!UBERON:0004537;8.36e-09;56!UBERON:0000947;3.01e-08;21!UBERON:0010191;3.01e-08;21!UBERON:0003914;3.21e-08;74!UBERON:0002049;8.08e-08;75!UBERON:0007798;8.08e-08;75!UBERON:0000055;1.80e-07;65 | |||
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| ||
|short_description=p1@MVP | |||
}} | }} |
Latest revision as of 04:29, 16 September 2015
Short description: | p1@MVP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MVP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000395353, ENST00000452209, uc002dui.2, uc002duj.2, uc010bzh.1, uc010vdz.1_5end |
EntrezGene: | MVP |
HGNC: | 7531 |
UniProt: | Q14764B4DVL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.94e-26 | 121 |
muscle precursor cell | 1.46e-19 | 58 |
myoblast | 1.46e-19 | 58 |
multi-potent skeletal muscle stem cell | 1.46e-19 | 58 |
muscle cell | 3.83e-19 | 55 |
smooth muscle cell | 1.15e-18 | 43 |
smooth muscle myoblast | 1.15e-18 | 43 |
fibroblast | 3.38e-16 | 76 |
embryonic cell | 2.87e-15 | 250 |
vascular associated smooth muscle cell | 7.56e-14 | 32 |
multi fate stem cell | 9.55e-14 | 427 |
electrically responsive cell | 1.22e-13 | 61 |
electrically active cell | 1.22e-13 | 61 |
somatic stem cell | 3.96e-13 | 433 |
stem cell | 9.12e-11 | 441 |
lining cell | 3.06e-07 | 58 |
barrier cell | 3.06e-07 | 58 |
skin fibroblast | 7.05e-07 | 23 |