FFCP PHASE1:Hg19::chr19:14785622..14785667,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84658 | |EntrezGene=84658 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23647 | |HGNC=23647 | ||
|TSSclassifier=strong | |||
|UniProt=E7EW83 | |UniProt=E7EW83 | ||
|association_with_transcript=0bp_to_ENST00000443157_5end | |association_with_transcript=0bp_to_ENST00000443157_5end | ||
|cluster_id=chr19:14785622..14785667,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_1_at_EMR3_5end | |description=CAGE_peak_1_at_EMR3_5end | ||
|id=chr19:14785622..14785667,- | |id=chr19:14785622..14785667,- | ||
|ontology_enrichment_celltype=CL:0002057!5.71e-53!42;CL:0000860!2.55e-48!45;CL:0000766!4.38e-43!76;CL:0000763!1.81e-42!112;CL:0000049!1.81e-42!112;CL:0000037!5.26e-40!172;CL:0000566!5.26e-40!172;CL:0000738!1.54e-39!140;CL:0002009!2.55e-39!65;CL:0002032!9.51e-38!165;CL:0000837!9.51e-38!165;CL:0002194!1.82e-37!63;CL:0000576!1.82e-37!63;CL:0000040!1.82e-37!63;CL:0000559!1.82e-37!63;CL:0000988!3.35e-36!182;CL:0000839!1.86e-35!70;CL:0000557!1.59e-34!71;CL:0002087!1.91e-31!119;CL:0002031!2.77e-30!124;CL:0002393!1.19e-12!9;CL:0002397!1.19e-12!9;CL:0000094!4.14e-12!8;CL:0000134!1.75e-08!358;CL:0000081!3.41e-08!11;CL:0002320!6.97e-08!365 | |ontology_enrichment_celltype=CL:0002057!5.71e-53!42;CL:0000860!2.55e-48!45;CL:0000766!4.38e-43!76;CL:0000763!1.81e-42!112;CL:0000049!1.81e-42!112;CL:0000037!5.26e-40!172;CL:0000566!5.26e-40!172;CL:0000738!1.54e-39!140;CL:0002009!2.55e-39!65;CL:0002032!9.51e-38!165;CL:0000837!9.51e-38!165;CL:0002194!1.82e-37!63;CL:0000576!1.82e-37!63;CL:0000040!1.82e-37!63;CL:0000559!1.82e-37!63;CL:0000988!3.35e-36!182;CL:0000839!1.86e-35!70;CL:0000557!1.59e-34!71;CL:0002087!1.91e-31!119;CL:0002031!2.77e-30!124;CL:0002393!1.19e-12!9;CL:0002397!1.19e-12!9;CL:0000094!4.14e-12!8;CL:0000134!1.75e-08!358;CL:0000081!3.41e-08!11;CL:0002320!6.97e-08!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.03e-62;33!CL:0002057;1.03e-62;33!CL:0000473;3.75e-49;39!CL:0000234;3.75e-49;39!CL:0000576;1.31e-46;48!CL:0000766;3.82e-36;69!CL:0000094;2.45e-19;8!CL:0000763;7.47e-17;100!CL:0002087;4.66e-16;104!CL:0002393;1.26e-13;6!CL:0002397;1.26e-13;6!CL:0000081;1.37e-13;11!CL:0000738;1.92e-12;136!CL:0000775;7.94e-09;3!CL:0000988;1.64e-08;177!CL:0000875;2.32e-08;3!CL:0002396;2.32e-08;3!CL:0000767;1.70e-07;3!CL:0000226;2.84e-07;3!CL:0000842;2.84e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.33e-88,42;CL:0002057,1.33e-88,42;CL:0000473,1.75e-83,48;CL:0000234,1.75e-83,48;CL:0000766,7.34e-75,72;CL:0002009,1.82e-64,61;CL:0002194,4.20e-64,59;CL:0000576,4.20e-64,59;CL:0000040,4.20e-64,59;CL:0000559,4.20e-64,59;CL:0000839,1.40e-61,66;CL:0000557,1.39e-57,67;CL:0000738,2.19e-55,136;CL:0000763,4.06e-55,108;CL:0000049,4.06e-55,108;CL:0000037,6.34e-48,168;CL:0002087,2.64e-47,115;CL:0002032,1.87e-45,161;CL:0000837,1.87e-45,161;CL:0000988,1.38e-44,177;CL:0002031,1.99e-44,120;CL:0002393,3.02e-20,9;CL:0002397,3.02e-20,9;CL:0000094,2.48e-19,8;CL:0000081,1.38e-13,11;CL:0000134,1.46e-13,354;CL:0002320,5.68e-13,361;CL:0000219,6.56e-11,386;CL:0000775,7.94e-09,3;CL:0000048,1.98e-08,427;CL:0000875,2.32e-08,3;CL:0002396,2.32e-08,3;CL:0000034,3.96e-08,441;CL:0000723,4.30e-08,433;CL:0000767,1.72e-07,3;CL:0000226,2.81e-07,3;CL:0000842,2.81e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.85e-63;42!CL:0000049;6.62e-17;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.18e-41!102;UBERON:0003061!1.18e-41!102;UBERON:0002193!9.22e-39!112;UBERON:0002371!1.04e-28!80;UBERON:0001474!1.57e-25!86;UBERON:0002405!1.85e-23!115;UBERON:0004765!3.19e-20!101;UBERON:0001434!3.19e-20!101;UBERON:0007023!5.23e-17!115;UBERON:0003081!2.89e-14!216;UBERON:0000178!6.83e-13!15;UBERON:0000179!6.83e-13!15;UBERON:0000463!6.83e-13!15;UBERON:0002204!6.41e-08!167;UBERON:0002384!1.91e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!1.18e-41!102;UBERON:0003061!1.18e-41!102;UBERON:0002193!9.22e-39!112;UBERON:0002371!1.04e-28!80;UBERON:0001474!1.57e-25!86;UBERON:0002405!1.85e-23!115;UBERON:0004765!3.19e-20!101;UBERON:0001434!3.19e-20!101;UBERON:0007023!5.23e-17!115;UBERON:0003081!2.89e-14!216;UBERON:0000178!6.83e-13!15;UBERON:0000179!6.83e-13!15;UBERON:0000463!6.83e-13!15;UBERON:0002204!6.41e-08!167;UBERON:0002384!1.91e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.38e-21;15!UBERON:0000179;1.38e-21;15!UBERON:0000463;1.38e-21;15!UBERON:0002390;6.02e-11;32!UBERON:0002193;1.14e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.39e-68,98;UBERON:0003061,2.39e-68,98;UBERON:0002193,4.53e-65,108;UBERON:0002371,2.80e-49,76;UBERON:0002405,8.35e-46,93;UBERON:0001474,9.47e-45,82;UBERON:0004765,1.20e-39,90;UBERON:0001434,2.03e-34,100;UBERON:0003081,8.21e-26,203;UBERON:0000178,1.34e-21,15;UBERON:0000179,1.34e-21,15;UBERON:0000463,1.34e-21,15;UBERON:0002204,1.13e-15,167;UBERON:0002384,3.60e-12,371;UBERON:0000926,3.73e-11,315;UBERON:0004120,3.73e-11,315;UBERON:0006603,3.73e-11,315 | |||
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|short_description=p1@EMR3 | |short_description=p1@EMR3 | ||
}} | }} |
Latest revision as of 05:52, 16 September 2015
Short description: | p1@EMR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EMR3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000443157_5end |
EntrezGene: | EMR3 |
HGNC: | 23647 |
UniProt: | E7EW83 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.39e-68 | 98 |
blood island | 2.39e-68 | 98 |
hemolymphoid system | 4.53e-65 | 108 |
bone marrow | 2.80e-49 | 76 |
immune system | 8.35e-46 | 93 |
bone element | 9.47e-45 | 82 |
skeletal element | 1.20e-39 | 90 |
skeletal system | 2.03e-34 | 100 |
lateral plate mesoderm | 8.21e-26 | 203 |
blood | 1.34e-21 | 15 |
haemolymphatic fluid | 1.34e-21 | 15 |
organism substance | 1.34e-21 | 15 |
musculoskeletal system | 1.13e-15 | 167 |
connective tissue | 3.60e-12 | 371 |
mesoderm | 3.73e-11 | 315 |
mesoderm-derived structure | 3.73e-11 | 315 |
presumptive mesoderm | 3.73e-11 | 315 |