FFCP PHASE1:Hg19::chr2:239756671..239756732,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:239756671..239756732,+ to FFCP PHASE1:Hg19::chr2:239756671..239756732,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=117581 | |EntrezGene=117581 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20670 | |HGNC=20670 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WVJ9 | |UniProt=Q8WVJ9 | ||
|association_with_transcript=0bp_to_ENST00000448943,NM_057179,uc010znx.1,uc010zny.1_5end | |||
|cluster_id=chr2:239756671..239756732,+ | |||
|coexpression_cluster_id=C4207 | |||
|description=CAGE_peak_1_at_TWIST2_5end | |||
|id=chr2:239756671..239756732,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.92e-39!180;CL:0000057!1.52e-29!75;CL:0000680!8.27e-18!57;CL:0000056!8.27e-18!57;CL:0000355!8.27e-18!57;CL:0000187!3.64e-17!54;CL:0000183!6.97e-16!59;CL:0000393!1.93e-14!60;CL:0000211!1.93e-14!60;CL:0000192!2.62e-14!42;CL:0000514!2.62e-14!42;CL:0002620!4.99e-13!23;CL:0000222!9.70e-11!119;CL:0000359!2.78e-10!32;CL:0000136!3.95e-10!15;CL:0002334!1.80e-07!12;CL:0002371!4.56e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0002620;9.15e-14;23!CL:0000057;3.92e-13;73!CL:0000192;1.59e-11;43!CL:0000187;1.08e-10;55!CL:0000359;2.66e-10;32!CL:0000136;2.79e-09;13!CL:0000393;8.89e-09;61!CL:0000211;8.89e-09;61!CL:0002320;4.46e-08;188!CL:0002334;8.28e-08;12!CL:0000134;5.06e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.70e-32,76;CL:0000680,2.87e-19,58;CL:0000056,2.87e-19,58;CL:0000355,2.87e-19,58;CL:0000187,1.39e-18,55;CL:0000393,5.68e-16,61;CL:0000211,5.68e-16,61;CL:0000192,1.51e-15,43;CL:0000514,1.51e-15,43;CL:0002620,1.00e-13,23;CL:0000222,3.85e-11,121;CL:0000359,8.21e-11,32;CL:0000136,1.19e-10,15;CL:0000048,2.42e-08,427;CL:0000723,3.17e-08,433;CL:0002334,7.83e-08,12;CL:0000034,5.47e-07,441;CL:0002321,5.76e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.59e-11;43!CL:0000355;1.27e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.50e-24!83;UBERON:0002329!5.50e-24!83;UBERON:0003077!5.50e-24!83;UBERON:0003059!5.50e-24!83;UBERON:0007282!5.50e-24!83;UBERON:0009618!5.50e-24!83;UBERON:0007285!5.50e-24!83;UBERON:0004290!1.40e-21!70;UBERON:0000486!1.53e-19!82;UBERON:0003102!1.29e-18!95;UBERON:0002385!4.88e-17!63;UBERON:0001015!4.88e-17!63;UBERON:0000383!4.88e-17!63;UBERON:0001134!5.00e-17!61;UBERON:0002036!5.00e-17!61;UBERON:0003082!5.00e-17!61;UBERON:0002199!1.20e-14!45;UBERON:0002416!1.20e-14!45;UBERON:0000475!9.35e-14!365;UBERON:0005256!2.20e-13!143;UBERON:0002097!7.26e-12!40;UBERON:0002100!7.56e-12!216;UBERON:0000468!9.95e-12!659;UBERON:0000467!1.26e-10!625;UBERON:0000480!2.10e-10!626;UBERON:0004872!4.07e-10!84;UBERON:0001637!5.02e-10!42;UBERON:0003509!5.02e-10!42;UBERON:0004572!5.02e-10!42;UBERON:0003104!9.81e-10!238;UBERON:0009142!9.81e-10!238;UBERON:0001013!2.16e-09!14;UBERON:0000481!3.42e-09!347;UBERON:0004573!8.40e-09!33;UBERON:0004571!8.40e-09!33;UBERON:0000926!5.20e-08!448;UBERON:0004120!5.20e-08!448;UBERON:0006603!5.20e-08!448;UBERON:0002049!8.99e-08!79;UBERON:0007798!8.99e-08!79;UBERON:0001981!1.17e-07!60;UBERON:0007500!1.17e-07!60;UBERON:0004537!1.17e-07!60;UBERON:0006965!1.17e-07!60;UBERON:0000490!1.74e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;4.73e-11;46!UBERON:0002416;4.73e-11;46!UBERON:0002097;4.91e-10;41!UBERON:0003102;6.06e-10;50!UBERON:0001013;7.22e-10;14!UBERON:0002384;1.96e-09;198!UBERON:0004573;1.71e-08;33!UBERON:0004571;1.71e-08;33!UBERON:0002385;1.82e-08;31!UBERON:0001015;1.82e-08;31!UBERON:0000383;1.82e-08;31!UBERON:0001637;1.97e-07;42!UBERON:0003509;1.97e-07;42!UBERON:0004572;1.97e-07;42 | |||
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|phase1_expression=43.9661677834747,53.0969299249638,44.8235005025188,40.0293193412522,21.9010936269371,42.7445876809181,75.9899634504932,73.2795053175124,212.866286982868,5.40614660303319,2.79120467188971,1.31064823278103,2.90143676051299,29.208859298571,17.5640609135795,26.2206807116192,23.5050865929351,18.2577522596843,27.8121695310589,8.37223194922158,12.2400414746552,6.89600387251793,0.85870796139317,3.83248390204076,0.251085279189606,0,0,0,0,0,1.70297735647684,14.7107395916628,20.7832083956993,18.4877005083394,0,0,0.587200878669695,0.553995408531877,0.401088894940283,0.434021741431704,0,0,0,0.145398238779565,1.13362783106643,0,0.232429036905685,0,0,0.28769239232215,0.512321413058201,0.47296445977717,0.689491361473237,0.645484683583826,0,0,0.272906150057846,0,0,0.320929027076094,0,0.329851300186716,0.598390972864896,0,0.290209238628584,0.56738522469114,0,0.502497330513487,1.0429658368404,0.217188844705117,4.23779651843358,1.47311054395026,0.316462387440884,0,0.637812899895131,0.209658645508376,0.44931452458598,0.150176892841506,0.803627933485401,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5045493051169,12.7433163343691,15.5992325449107,10.1202962667679,28.0749229956098,15.0640379719257,6.36228757640879,10.705967146658,5.10488012685966,4.87804674417641,2.72287835648691,5.17367348215965,1.45718115317017,0.370784442784429,0,0.348259474598534,0.132957960518865,0,0,0,2.98143611050058,30.1082108287144,5.9013885273291,7.91431118693613,5.03399323451887,1.10047216776027,3.9709043641994,0,1.06729878806013,0.33472061276467,0,0.760272105718513,0,0,0,1.7859945656816,2.46982309888787,1.80178368773316,0,2.84779697870439,7.69447324507711,0,0,8.28578699070815,10.4364109856017,23.1733836346181,12.8436905388822,12.9076479336966,35.4668382198357,8.41016400213461,20.2823091886439,13.0733800661095,12.7596524513904,9.29503637280848,9.48079038058061,7.7192288098915,17.2852777344,60.6892508449533,107.695226506461,103.255399699545,224.770815549909,44.1553714900556,46.9431538667581,52.8095033200454,83.0907477007416,37.7101354147128,90.5133843099705,135.432325730154,106.819313448337,15.4727431529464,44.5543247926068,80.1279902421355,50.4227635084016,60.9541054065202,21.9488810440419,45.3601937782549,39.512609492435,9.30143901912172,13.4542226766646,61.9316427573846,162.339836288224,41.4125712596475,82.3389708615127,28.8557404851105,66.0714839977144,31.3923977968755,31.4721526670672,43.1661753957436,227.731449241049,59.0008107388663,22.0105947360301,21.0571885295768,46.2900417007631,6.95739071387869,3.54569956768085,6.30970109855808,0,0,0,0,0,3.6497735907583,15.6449532329816,34.7350106624158,30.3896826975457,84.0505949737882,119.110114475482,7.21671480243048,6.40621822296786,5.78426471720357,7.279402200338,7.1900216550494,7.1181185733329,4.85392709376592,7.84885860501384,7.31019598198142,0,5.60967095213783,18.520830509913,24.9914809355421,0,0,0.590789906681404,0,0,5.49016992955282,3.84125998930189,13.4882103909143,1.60846355858609,3.14800713539001,82.7553095488225,67.5957610431726,14.4331342025273,2.55046890945169,2.58299127318808,0,0,0.570762456703795,0,0,0,0.234004265139238,0,0.93733833986777,1.00789276919316,0.141775097242386,5.91086249838799,14.2410629871841,25.3032568249039,0,0,2.90259361757081,0.864719720501769,2.27236380167484,4.06386523469882,0,0,34.214489204541,2.15937734676979,0,0,5.27016096423195,3.92364061949952,5.79372457985505,21.0712896685178,236.053254262242,50.71816515336,35.3697695057878,27.0419335969552,12.0887465903207,8.5109479213967,17.8502859940787,15.1556673277636,11.3950537132203,14.8183260620538,36.8081888251921,12.0833262572466,17.4229412045354,4.82303003295338,8.71533458600294,2.69927076191554,0,0,0,2.39624855491583,2.29723871668228,18.5427976552934,16.9394128801068,15.8216768363795,10.206474904674,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,20.3667876253772,20.5069913634468,8.13795071099207,18.5094066762418,60.665856191035,41.7911399839927,18.5083435688487,6.62081419400982,9.09630016223939,50.7018049333274,1.32845119707087,9.58719676416856,186.017818576165,6.06983588134496,6.51972505240626,0.206768026122887,0.431428401637234,0,0.303127571446259,8.32177197552485,6.04780586659361,34.9832009024475,18.8758227144317,55.2900386033155,48.3084592693993,63.4516988842712,20.7501558275254,56.3988652490966,45.646069365586,57.35243727614,47.0588603959126,53.483206205913,33.8172201318481,0,4.61164881697555,8.65561295997425,29.9665709709624,34.4152307532695,46.8114161405144,0.451199612907412,0,1.56869953835371,0,0,0,0,1.51141141271498,4.62681758070868,2.70946437543853,1.50506932156456,0,0.831076008928724,0.447749509444357,0,0,1.53870075069834,0,0.976135183992909,4.6368455241475,0,0,11.4853107599234,14.95138565884,22.4957501781823,40.9883845558597,11.0915004322544,12.1267903033642,15.0241864008138,15.2536747712949,33.2088229063583,15.3407929348982,5.16385806751077,4.62797763010739,5.95789208831829,7.01869918720213,3.33820676823315,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| ||
|short_description=p1@TWIST2 | |||
}} | }} |
Latest revision as of 06:12, 16 September 2015
Short description: | p1@TWIST2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TWIST2_5end |
Coexpression cluster: | C4207_Mesenchymal_Fibroblast_Adipocyte_Pancreatic_Trabecular_tenocyte_Hair |
Association with transcript: | 0bp_to_ENST00000448943, NM_057179, uc010znx.1, uc010zny.1_5end |
EntrezGene: | TWIST2 |
HGNC: | 20670 |
UniProt: | Q8WVJ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.70e-32 | 76 |
muscle precursor cell | 2.87e-19 | 58 |
myoblast | 2.87e-19 | 58 |
multi-potent skeletal muscle stem cell | 2.87e-19 | 58 |
muscle cell | 1.39e-18 | 55 |
electrically responsive cell | 5.68e-16 | 61 |
electrically active cell | 5.68e-16 | 61 |
smooth muscle cell | 1.51e-15 | 43 |
smooth muscle myoblast | 1.51e-15 | 43 |
skin fibroblast | 1.00e-13 | 23 |
mesodermal cell | 3.85e-11 | 121 |
vascular associated smooth muscle cell | 8.21e-11 | 32 |
fat cell | 1.19e-10 | 15 |
multi fate stem cell | 2.42e-08 | 427 |
somatic stem cell | 3.17e-08 | 433 |
preadipocyte | 7.83e-08 | 12 |
stem cell | 5.47e-07 | 441 |
embryonic cell | 5.76e-07 | 250 |