FFCP PHASE1:Hg19::chr8:128750143..128750160,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:128750143..128750160,+ to FFCP PHASE1:Hg19::chr8:128750143..128750160,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4609 | |EntrezGene=4609 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7553 | |HGNC=7553 | ||
|TSSclassifier=strong | |||
|UniProt=P01106,Q16158 | |UniProt=P01106,Q16158 | ||
|association_with_transcript=-348bp_to_AB527619,AB528057,BT019768,DQ894085,S70386_5end | |||
|cluster_id=chr8:128750143..128750160,+ | |||
|description=CAGE_peak_19_at_MYC_5end | |||
|id=chr8:128750143..128750160,+ | |||
|ontology_enrichment_celltype=CL:0000791!8.00e-10!18;CL:0000789!8.00e-10!18;CL:0002420!8.00e-10!18;CL:0002419!8.00e-10!18;CL:0000790!8.00e-10!18;CL:0000838!1.03e-08!52;CL:0000542!2.96e-08!53;CL:0000051!2.96e-08!53;CL:0000084!8.41e-08!25;CL:0000827!8.41e-08!25;CL:0002087!2.71e-07!119;CL:0002031!2.99e-07!124;CL:0000236!4.08e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.07e-25;18!CL:0000789;4.07e-25;18!CL:0002419;4.07e-25;18!CL:0000084;1.93e-20;25!CL:0000236;4.24e-20;13!CL:0000542;1.87e-15;53!CL:0000625;1.11e-14;11!CL:0000624;3.43e-14;6!CL:0000945;4.16e-10;24!CL:0001014;2.71e-08;2!CL:0001016;2.71e-08;2!CL:0000815;7.54e-08;2!CL:0000792;7.54e-08;2!CL:0002677;7.54e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.10e-26,52;CL:0000542,4.50e-26,53;CL:0000051,4.50e-26,53;CL:0000791,4.70e-25,18;CL:0000789,4.70e-25,18;CL:0002420,4.70e-25,18;CL:0002419,4.70e-25,18;CL:0000790,4.70e-25,18;CL:0000084,3.13e-20,25;CL:0000827,3.13e-20,25;CL:0000236,5.30e-19,14;CL:0000625,1.12e-14,11;CL:0000624,4.06e-14,6;CL:0002031,7.78e-13,120;CL:0002087,3.90e-11,115;CL:0000738,1.32e-10,136;CL:0000945,2.32e-10,24;CL:0000826,2.32e-10,24;CL:0002032,7.00e-09,161;CL:0000837,7.00e-09,161;CL:0001014,2.06e-08,2;CL:0001016,2.06e-08,2;CL:0000988,2.64e-08,177;CL:0000037,2.94e-08,168;CL:0000815,7.39e-08,2;CL:0000792,7.39e-08,2;CL:0002677,7.39e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;4.07e-25;18!CL:0000051;1.87e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;7.54e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,2.60e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;7.54e-08;2!UBERON:0002173;7.54e-08;2!UBERON:0002186;7.54e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.60e-07,2;UBERON:0002173,2.60e-07,2;UBERON:0002186,2.60e-07,2 | |||
|phase1_expression=0.908391896352783,0,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0.655324116390517,0,0,0,0,0.602694528023977,0,0.487932798790507,0.61560529038394,0.204000691244253,0.626909442956176,0,0.136874425072884,0.251085279189606,0,0,0,0.786728553697808,0,0.619264493264304,0,0,0,0,0,0.587200878669695,0.553995408531877,2.00544447470142,0.868043482863407,0.447830948479849,0.647787332037959,1.03030227053675,0.436194716338694,0.377875943688809,0.727752183563449,0.232429036905685,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0.564727018627814,0,0.224723484445085,0.612167784741805,0,0,0,0,0,0.580418477257168,0,0.622822248995575,0.75374599577023,0,0,0,0.368277635987565,0,0.422510572623884,0.637812899895131,0.209658645508376,0.112328631146495,0.901061357049038,0.48217676009124,0,0,0,1.75996244461323,1.09227722252426,1.77901850772711,1.28019066769952,0.800791974072025,0.574752439954483,1.98313461835459,1.90810750907073,2.84606484554724,1.76171156811282,1.14681968437569,0,0,0.526768169550154,1.180258620683,1.57204305099666,1.23360899399706,1.5046784585161,1.62961133316795,1.89379122293893,1.94826728407911,0.557052284425868,1.17842362989935,0.664601683750863,0,0.128091319725675,0.520237390239513,0.328875809207352,1.38175008892924,0.869409257205157,1.63115219478266,1.87278579662799,1.04535523804977,0.793165398882963,0.766440987203842,0.68725489096526,0.506039384039006,0.95569624297229,1.95325036156926,0,1.05402583354441,1.15187950038977,1.24930726552346,2.36777252044017,0.821127996921047,0.604820229674197,1.33720097891754,1.88271725047639,0,1.34140171940727,0.383587685530591,0,0,0.289693037921647,0,0,0.0945348171640679,0,0.175669571386252,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.797747763113191,0,0,0,0.79504962946682,0,0,0.56530794192401,0,0,0.208994966536811,0,0,1.00416183829401,1.20848795132744,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0.366403487860815,0,0,0,0,0.506522046658319,0,0.286836620748814,0.354668382198357,0,2.1349799145941,0.74000264525148,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0.298897361103602,0.23486899728753,0,0.140450806702248,0.204154171254893,0.122834317311768,0,0,0.494533858557114,0,0.718618141816238,0,0.125118519871964,0,0,0,0.45071417671979,0,0.358779271377724,0.213557388818567,0.211931901159562,0.600182192168805,0.206105058476878,0.772921620136887,0.37223371266318,0.506328996723799,0.389748020644795,0.757301322732344,0.184099797284599,0.161646056818812,0.710019185033229,0.201504196455281,0.339121184620975,0.193260853163297,0.272746120590835,0,0.487894824518382,0.265059536642971,0,0.10366105501537,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0.277765335475589,0.651616610620649,0,0,0,0.352226082707465,0.433099343283221,0.462985512576611,0,0,0,0.984868024349589,0,0.148631162288728,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0.144119953416961,0.37872730027914,0.126995788584338,0,0,0,0,0,0.285826432630578,0.224262168690721,0,0.2933531432838,0.387815147273333,0,0,0.797814349754612,0,0.257207374262142,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0.399891964728228,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0.112085143993527,0.197030760201927,0.431255149719035,0.256686072559497,0,0,0,0,0.637938751653163,0,0,0,0.49076596687656,0,0.271265023699736,0.207970861530807,0.535286966391485,0.157702415033935,0,0.300946099727719,0,0,0,0.184369168541703,0.260650843404249,1.17480694477644,0,0.620304078368662,0.647142602455851,0.74709290462411,0,0,0.30239029332968,0,0.153461973288062,0.561320188866147,0.384417447767103,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0.262248829918848,0.451199612907412,0.308061348417659,0,1.46139224653261,0,0,0,0.431831832204279,0,0,0.501689773854853,0.254876273045038,0,0.671624264166535,0,0.261435451024901,0,0.984043937099117,0.325378394664303,0.103041011647722,0.732555718546747,0.495056999523528,0,0.650060246036521,0,0.48335359146061,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.267096106940212,0.165284915360978,0,0.127612712494584,0,0.464845549297286,0.62962469366128,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0.179872457583315,0.274537029736055,0.353437207037059,0.404364963146632,0,0,0,0,0,0.136499911407986,0.282810863907425,0,1.10273068709225,0.66343897524122,0,0,0,0.405820753925408,0,0.281695602532241,0.430234056612155,0.196498082026242,0.35667105148125,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0.764637207142375,0.569647187174163,0.952927101831156,0,0,0.540031437238115,0,0.534120355637366,0,0.245040215981032,0,0.144269212976445,0.355709216742071,0,0.59873811429845,0,0,0.324621940274555,0.561594356226918,0.456469358066384,1.25343916618419,0,0,0.1605880751037,0.20179970719104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| 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| ||
|short_description=p19@MYC | |||
}} | }} |
Latest revision as of 06:41, 16 September 2015
Short description: | p19@MYC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_MYC_5end |
Coexpression cluster: | NA |
Association with transcript: | -348bp_to_AB527619, AB528057, BT019768, DQ894085, S70386_5end |
EntrezGene: | MYC |
HGNC: | 7553 |
UniProt: | P01106Q16158 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.10e-26 | 52 |
lymphocyte | 4.50e-26 | 53 |
common lymphoid progenitor | 4.50e-26 | 53 |
mature alpha-beta T cell | 4.70e-25 | 18 |
alpha-beta T cell | 4.70e-25 | 18 |
immature T cell | 4.70e-25 | 18 |
mature T cell | 4.70e-25 | 18 |
immature alpha-beta T cell | 4.70e-25 | 18 |
T cell | 3.13e-20 | 25 |
pro-T cell | 3.13e-20 | 25 |
B cell | 5.30e-19 | 14 |
CD8-positive, alpha-beta T cell | 1.12e-14 | 11 |
CD4-positive, alpha-beta T cell | 4.06e-14 | 6 |
hematopoietic lineage restricted progenitor cell | 7.78e-13 | 120 |
nongranular leukocyte | 3.90e-11 | 115 |
leukocyte | 1.32e-10 | 136 |
lymphocyte of B lineage | 2.32e-10 | 24 |
pro-B cell | 2.32e-10 | 24 |
hematopoietic oligopotent progenitor cell | 7.00e-09 | 161 |
hematopoietic multipotent progenitor cell | 7.00e-09 | 161 |
CD1a-positive Langerhans cell | 2.06e-08 | 2 |
immature CD1a-positive Langerhans cell | 2.06e-08 | 2 |
hematopoietic cell | 2.64e-08 | 177 |
hematopoietic stem cell | 2.94e-08 | 168 |
regulatory T cell | 7.39e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.39e-08 | 2 |
naive regulatory T cell | 7.39e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.60e-07 | 2 |
alveolar duct | 2.60e-07 | 2 |
bronchiole | 2.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.60e-07 | 2 |