FFCP PHASE1:Hg19::chrX:73063015..73063028,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:73063015..73063028,- to FFCP PHASE1:Hg19::chrX:73063015..73063028,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7503 | |EntrezGene=7503 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=12810 | |HGNC=12810 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=163bp_to_BX648323_5end | |||
|cluster_id=chrX:73063015..73063028,- | |||
|coexpression_cluster_id=C639 | |||
|description=CAGE_peak_16_at_XIST_5end | |||
|id=chrX:73063015..73063028,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.51e-12;33!CL:0002057;1.51e-12;33!CL:0000473;2.64e-09;39!CL:0000234;2.64e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.76e-10,42;CL:0002057,6.76e-10,42;CL:0000473,1.04e-09,48;CL:0000234,1.04e-09,48;CL:0002009,8.50e-08,61;CL:0002194,4.52e-07,59;CL:0000576,4.52e-07,59;CL:0000040,4.52e-07,59;CL:0000559,4.52e-07,59;CL:0000557,8.67e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;4.11e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.37e-11!57;UBERON:0005068!2.37e-11!57;UBERON:0006241!2.37e-11!57;UBERON:0007135!2.37e-11!57;UBERON:0002020!5.40e-11!34;UBERON:0003528!5.40e-11!34;UBERON:0003080!1.46e-10!42;UBERON:0001893!3.44e-10!34;UBERON:0002780!4.90e-10!41;UBERON:0001890!4.90e-10!41;UBERON:0006240!4.90e-10!41;UBERON:0002791!5.75e-10!33;UBERON:0002616!7.52e-10!59;UBERON:0001869!3.07e-09!32;UBERON:0002346!2.00e-08!90;UBERON:0007023!2.43e-08!115;UBERON:0003075!2.69e-08!86;UBERON:0007284!2.69e-08!86;UBERON:0003056!4.05e-08!61;UBERON:0002619!1.46e-07!22;UBERON:0001950!1.52e-07!20;UBERON:0005743!1.58e-07!86;UBERON:0001017!1.60e-07!82;UBERON:0000956!7.34e-07!25;UBERON:0000203!7.34e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001871;6.28e-10;6!UBERON:0003528;1.61e-08;34!UBERON:0002020;1.61e-08;34!UBERON:0002420;3.76e-07;9!UBERON:0000125;3.76e-07;9!UBERON:0007245;3.76e-07;9!UBERON:0002308;3.76e-07;9!UBERON:0010009;3.76e-07;9!UBERON:0010011;3.76e-07;9!UBERON:0000454;3.76e-07;9!UBERON:0001950;4.41e-07;20!UBERON:0002791;5.57e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,6.28e-10,34;UBERON:0002020,6.28e-10,34;UBERON:0001871,6.95e-10,6;UBERON:0000073,9.32e-09,53;UBERON:0002616,9.32e-09,53;UBERON:0001049,4.17e-08,56;UBERON:0005068,4.17e-08,56;UBERON:0006241,4.17e-08,56;UBERON:0007135,4.17e-08,56;UBERON:0002780,7.07e-08,41;UBERON:0001890,7.07e-08,41;UBERON:0003080,7.07e-08,41;UBERON:0006240,7.07e-08,41;UBERON:0002791,1.24e-07,32;UBERON:0001950,3.58e-07,20;UBERON:0002420,4.21e-07,9;UBERON:0007245,4.21e-07,9;UBERON:0010009,4.21e-07,9;UBERON:0010011,4.21e-07,9;UBERON:0000454,4.21e-07,9;UBERON:0001893,4.53e-07,34;UBERON:0000125,8.57e-07,9;UBERON:0002308,8.57e-07,9 | |||
|phase1_expression=0.54503513781167,1.49870366723688,0.422863212287913,0,0,0,2.53299878168311,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0.916960868975415,0.492603536699674,0.550975469195755,0.393364276848904,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0.647787332037959,0,1.45398238779565,0.755751887377619,0,0.697287110717054,1.6446715520873,0,1.1507695692886,2.30544635876191,0,1.03423704220986,0.645484683583826,0,2.44715041405386,3.27487380069415,0,1.53041946185451,1.28371610830437,0,0.659702600373432,2.39356389145958,0,2.61188314765726,0,0,2.26123798731069,2.08593167368081,0,1.81619850790011,0.368277635987565,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0.889509253863555,0,0,0.574752439954483,0,0,2.27685187643779,0.587237189370939,0,0,0,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850813354476611,0,1.14185221401064,0.458426764241994,0,0,0.649094787309367,0.696518949197069,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0.860509862246441,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0.500474079487857,0,0.877955241761676,0,0,0,1.97328599257748,0.85422955527427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,0,1.18157981336281,0,0,0.514703430895577,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,0.16798212819886,0,0,0,0,0.985326475791887,0.528290604079356,0.621984346622316,0.720599767084807,0.25248486685276,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,1.06375246633948,0,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,4.21667878966063,0,0,0,0.579125226670317,0,0.358121926479791,0.448340575974109,0,0,0,0.508189248444927,0,0,0.502548796003046,0,0,0,0.414415513436035,0,0,0,0,0.535286966391485,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0,0,1.66435439510497,0,0.248107807818777,0.61384789315225,0.841980283299221,0,0,0,1.48418066444991,0.616838775210622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0.103041011647722,1.37354197227515,0.660075999364704,0,0,0,0.48335359146061,0.462145851343933,0.460511024178389,0,0,0.435050081742686,0.93749290157711,0.178064071293475,1.65284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0.255897791311334,0,0,0,0,1.64722217841633,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0.507447609232169,0,1.13929437434833,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0.121360521749513,0,0,0,0,0,1.9882952955326,1.26602474769461,0.333926115068718,0,0,0.19924798825107,0,0.755798243562828,0,0,1.55519793830904,0,0,0,0.295930216910801,0,0,0,0,0,0,0.262379999988587,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.964771509003264,0,1.76926815889959,0,0,0,0.557694977114413,0.384751292518985,1.59518878185802,0,0,0,0,0.0915975934018623,0,0,0.31396051279005,0,0,0.392125068635479,0,0,0,0,0,0,0,1.99052386215701,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,4.89716418608784,0.63186579628488,2.40517471063188,7.2581733978073,0,0,0,0,0,0.693373365065693,0,0.0979923974143777,0,0,0,0,0,0.0821154570532092,0.290967049465258,0.617792886840502,0.451961481561065,0,0,0.0633107959558787,2.54216797555244,0,0,0,1.29681375438695,0,0,0,0,0,0,0,0,0,0,1.23214841002794,0,0,0,0,0,0,1.19807400299395,0.858452096273142,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0.817220436669454,0,0.687697182986169,0.415440338029185,0.449947783103001,1.5476039091159,0.0607495566580247,0.670869375198532,0.0788057072991982,0.0524545881349981,0,0,0,0,0,1.017074150619,0.542999601753713,0,0.653174720218818,0,0,5.62280471891892,0,0,0,1.0342636508924,1.19009341568421,0,0,0.106787412567695,0,0,0,0.988058159489721,0,0,0.544017803369474,0.5013797880454,0,0.327872630709804,0,1.77213635993397,2.07444650333337,0.876336514945499,0.573409195690071,0.776503360757966,0,0,0,0.303298235083296,0,0.470531639396343,0,1.44921028610825,0.447764408660622,0,2.21922344601045,0,0,0.889811221596536,0,0.302461847526478,0,0,0.796483835818512,0.449803112163605,0.155262956876259,0,0.265841714557995,2.08698024724694,0.751288044986092,1.14241563650639,0.406870733204662,1.45478927362048,0.214821114084977,0,2.78667122089031,2.40016658797892,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0.584580926518165,0.265729680626726,0.327130788511688,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0,0,0,0,0,1.41070377476274,1.8374728641192,0.0642292250964595,0,0.798169295285756,0,0,0.0691572524642179,0.807378228159255,0,0,0,0,0.924205329202706,0,0,0,0.451261970095544,0,0,0,0,0,0.0675375846183947,0.781078098613847,1.2401207790071,0.443910671357348,1.64092442705466,0,0,0.527613733078862,0,0,1.3451348888753,1.21393120847326,0,0.443511850813194,1.03710588800201,0.514464028312255,0.0679697329768317,0,0,0,0,1.09980912941201,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0.828864656652147,1.0243108625637,0.691259661814092,0,0,0,0,1.3746412112643,0.31020638566432,0,0,0,0,0,0.205325613712494,0,0.971421986118279,1.16969731731053,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0.594092800654172,0,0,0,0.257831551894309,0.499705779624645,0,1.05868461514708,0,0,0,1.29005624836306,0,0.135982980381829,5.23620828408453,0,0,0,0.432626562123789,0.756998549010474,0,1.14028650910293,0,0.801652215796681,0,0,0,0.267964130156178,0,0.620597975171371,0,0,0,0.186224142887574,0,0.25458863311266,0,0,0.684466602170562,0.0673520530145875,0.286888821570705,0,0,0,0,0,0,0.611207220914332,0,0,0,2.24397944612263 | |phase1_expression=0.54503513781167,1.49870366723688,0.422863212287913,0,0,0,2.53299878168311,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0.916960868975415,0.492603536699674,0.550975469195755,0.393364276848904,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0.647787332037959,0,1.45398238779565,0.755751887377619,0,0.697287110717054,1.6446715520873,0,1.1507695692886,2.30544635876191,0,1.03423704220986,0.645484683583826,0,2.44715041405386,3.27487380069415,0,1.53041946185451,1.28371610830437,0,0.659702600373432,2.39356389145958,0,2.61188314765726,0,0,2.26123798731069,2.08593167368081,0,1.81619850790011,0.368277635987565,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0.889509253863555,0,0,0.574752439954483,0,0,2.27685187643779,0.587237189370939,0,0,0,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850813354476611,0,1.14185221401064,0.458426764241994,0,0,0.649094787309367,0.696518949197069,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0.860509862246441,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0.500474079487857,0,0.877955241761676,0,0,0,1.97328599257748,0.85422955527427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,0,1.18157981336281,0,0,0.514703430895577,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,0.16798212819886,0,0,0,0,0.985326475791887,0.528290604079356,0.621984346622316,0.720599767084807,0.25248486685276,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,1.06375246633948,0,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,4.21667878966063,0,0,0,0.579125226670317,0,0.358121926479791,0.448340575974109,0,0,0,0.508189248444927,0,0,0.502548796003046,0,0,0,0.414415513436035,0,0,0,0,0.535286966391485,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0,0,1.66435439510497,0,0.248107807818777,0.61384789315225,0.841980283299221,0,0,0,1.48418066444991,0.616838775210622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0.103041011647722,1.37354197227515,0.660075999364704,0,0,0,0.48335359146061,0.462145851343933,0.460511024178389,0,0,0.435050081742686,0.93749290157711,0.178064071293475,1.65284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0.255897791311334,0,0,0,0,1.64722217841633,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0.507447609232169,0,1.13929437434833,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0.121360521749513,0,0,0,0,0,1.9882952955326,1.26602474769461,0.333926115068718,0,0,0.19924798825107,0,0.755798243562828,0,0,1.55519793830904,0,0,0,0.295930216910801,0,0,0,0,0,0,0.262379999988587,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.964771509003264,0,1.76926815889959,0,0,0,0.557694977114413,0.384751292518985,1.59518878185802,0,0,0,0,0.0915975934018623,0,0,0.31396051279005,0,0,0.392125068635479,0,0,0,0,0,0,0,1.99052386215701,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,4.89716418608784,0.63186579628488,2.40517471063188,7.2581733978073,0,0,0,0,0,0.693373365065693,0,0.0979923974143777,0,0,0,0,0,0.0821154570532092,0.290967049465258,0.617792886840502,0.451961481561065,0,0,0.0633107959558787,2.54216797555244,0,0,0,1.29681375438695,0,0,0,0,0,0,0,0,0,0,1.23214841002794,0,0,0,0,0,0,1.19807400299395,0.858452096273142,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0.817220436669454,0,0.687697182986169,0.415440338029185,0.449947783103001,1.5476039091159,0.0607495566580247,0.670869375198532,0.0788057072991982,0.0524545881349981,0,0,0,0,0,1.017074150619,0.542999601753713,0,0.653174720218818,0,0,5.62280471891892,0,0,0,1.0342636508924,1.19009341568421,0,0,0.106787412567695,0,0,0,0.988058159489721,0,0,0.544017803369474,0.5013797880454,0,0.327872630709804,0,1.77213635993397,2.07444650333337,0.876336514945499,0.573409195690071,0.776503360757966,0,0,0,0.303298235083296,0,0.470531639396343,0,1.44921028610825,0.447764408660622,0,2.21922344601045,0,0,0.889811221596536,0,0.302461847526478,0,0,0.796483835818512,0.449803112163605,0.155262956876259,0,0.265841714557995,2.08698024724694,0.751288044986092,1.14241563650639,0.406870733204662,1.45478927362048,0.214821114084977,0,2.78667122089031,2.40016658797892,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0.584580926518165,0.265729680626726,0.327130788511688,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0,0,0,0,0,1.41070377476274,1.8374728641192,0.0642292250964595,0,0.798169295285756,0,0,0.0691572524642179,0.807378228159255,0,0,0,0,0.924205329202706,0,0,0,0.451261970095544,0,0,0,0,0,0.0675375846183947,0.781078098613847,1.2401207790071,0.443910671357348,1.64092442705466,0,0,0.527613733078862,0,0,1.3451348888753,1.21393120847326,0,0.443511850813194,1.03710588800201,0.514464028312255,0.0679697329768317,0,0,0,0,1.09980912941201,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0.828864656652147,1.0243108625637,0.691259661814092,0,0,0,0,1.3746412112643,0.31020638566432,0,0,0,0,0,0.205325613712494,0,0.971421986118279,1.16969731731053,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0.594092800654172,0,0,0,0.257831551894309,0.499705779624645,0,1.05868461514708,0,0,0,1.29005624836306,0,0.135982980381829,5.23620828408453,0,0,0,0.432626562123789,0.756998549010474,0,1.14028650910293,0,0.801652215796681,0,0,0,0.267964130156178,0,0.620597975171371,0,0,0,0.186224142887574,0,0.25458863311266,0,0,0.684466602170562,0.0673520530145875,0.286888821570705,0,0,0,0,0,0,0.611207220914332,0,0,0,2.24397944612263 | ||
|short_description=p16@XIST | |||
}} | }} |
Latest revision as of 09:20, 16 September 2015
Short description: | p16@XIST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_XIST_5end |
Coexpression cluster: | C639_parietal_embryonic_medial_temporal_cerebellum_skin_spinal |
Association with transcript: | 163bp_to_BX648323_5end |
EntrezGene: | XIST |
HGNC: | 12810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.76e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.76e-10 | 42 |
defensive cell | 1.04e-09 | 48 |
phagocyte | 1.04e-09 | 48 |
macrophage dendritic cell progenitor | 8.50e-08 | 61 |
monopoietic cell | 4.52e-07 | 59 |
monocyte | 4.52e-07 | 59 |
monoblast | 4.52e-07 | 59 |
promonocyte | 4.52e-07 | 59 |
granulocyte monocyte progenitor cell | 8.67e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 6.28e-10 | 34 |
gray matter | 6.28e-10 | 34 |
temporal lobe | 6.95e-10 | 6 |
regional part of nervous system | 9.32e-09 | 53 |
regional part of brain | 9.32e-09 | 53 |
neural tube | 4.17e-08 | 56 |
neural rod | 4.17e-08 | 56 |
future spinal cord | 4.17e-08 | 56 |
neural keel | 4.17e-08 | 56 |
regional part of forebrain | 7.07e-08 | 41 |
forebrain | 7.07e-08 | 41 |
anterior neural tube | 7.07e-08 | 41 |
future forebrain | 7.07e-08 | 41 |
regional part of telencephalon | 1.24e-07 | 32 |
neocortex | 3.58e-07 | 20 |
basal ganglion | 4.21e-07 | 9 |
nuclear complex of neuraxis | 4.21e-07 | 9 |
aggregate regional part of brain | 4.21e-07 | 9 |
collection of basal ganglia | 4.21e-07 | 9 |
cerebral subcortex | 4.21e-07 | 9 |
telencephalon | 4.53e-07 | 34 |
neural nucleus | 8.57e-07 | 9 |
nucleus of brain | 8.57e-07 | 9 |