FFCP PHASE1:Hg19::chrX:73164149..73164166,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=554203 | |EntrezGene=554203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=37191 | |HGNC=37191 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_024582,uc004ebo.2,uc004ebp.2_5end | |association_with_transcript=0bp_to_NR_024582,uc004ebo.2,uc004ebp.2_5end | ||
|cluster_id=chrX:73164149..73164166,+ | |||
|description=CAGE_peak_2_at_JPX_5end | |description=CAGE_peak_2_at_JPX_5end | ||
|id=chrX:73164149..73164166,+ | |id=chrX:73164149..73164166,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.14e-12!57;UBERON:0005068!1.14e-12!57;UBERON:0006241!1.14e-12!57;UBERON:0007135!1.14e-12!57;UBERON:0002780!1.20e-10!41;UBERON:0001890!1.20e-10!41;UBERON:0006240!1.20e-10!41;UBERON:0002616!1.44e-10!59;UBERON:0002346!1.48e-10!90;UBERON:0003080!2.47e-10!42;UBERON:0001017!3.31e-10!82;UBERON:0003075!3.54e-10!86;UBERON:0007284!3.54e-10!86;UBERON:0005743!7.18e-10!86;UBERON:0000073!2.94e-09!94;UBERON:0001016!2.94e-09!94;UBERON:0003056!1.06e-08!61;UBERON:0000955!3.68e-08!69;UBERON:0006238!3.68e-08!69;UBERON:0002020!8.49e-08!34;UBERON:0003528!8.49e-08!34;UBERON:0001893!1.62e-07!34;UBERON:0002791!2.42e-07!33;UBERON:0001869!7.18e-07!32 | |ontology_enrichment_uberon=UBERON:0001049!1.14e-12!57;UBERON:0005068!1.14e-12!57;UBERON:0006241!1.14e-12!57;UBERON:0007135!1.14e-12!57;UBERON:0002780!1.20e-10!41;UBERON:0001890!1.20e-10!41;UBERON:0006240!1.20e-10!41;UBERON:0002616!1.44e-10!59;UBERON:0002346!1.48e-10!90;UBERON:0003080!2.47e-10!42;UBERON:0001017!3.31e-10!82;UBERON:0003075!3.54e-10!86;UBERON:0007284!3.54e-10!86;UBERON:0005743!7.18e-10!86;UBERON:0000073!2.94e-09!94;UBERON:0001016!2.94e-09!94;UBERON:0003056!1.06e-08!61;UBERON:0000955!3.68e-08!69;UBERON:0006238!3.68e-08!69;UBERON:0002020!8.49e-08!34;UBERON:0003528!8.49e-08!34;UBERON:0001893!1.62e-07!34;UBERON:0002791!2.42e-07!33;UBERON:0001869!7.18e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.28e-08;53!UBERON:0002616;2.28e-08;53!UBERON:0002780;6.09e-08;41!UBERON:0001890;6.09e-08;41!UBERON:0003528;5.12e-07;34!UBERON:0002020;5.12e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.78e-13,56;UBERON:0005068,5.78e-13,56;UBERON:0006241,5.78e-13,56;UBERON:0007135,5.78e-13,56;UBERON:0000073,4.35e-12,53;UBERON:0002616,4.35e-12,53;UBERON:0002346,1.03e-10,86;UBERON:0002780,1.20e-10,41;UBERON:0001890,1.20e-10,41;UBERON:0003080,1.20e-10,41;UBERON:0006240,1.20e-10,41;UBERON:0001017,2.19e-10,81;UBERON:0003075,2.45e-10,82;UBERON:0007284,2.45e-10,82;UBERON:0001016,1.09e-09,89;UBERON:0003056,2.54e-09,61;UBERON:0000955,2.49e-08,68;UBERON:0006238,2.49e-08,68;UBERON:0003528,8.49e-08,34;UBERON:0002020,8.49e-08,34;UBERON:0010371,1.52e-07,104;UBERON:0001893,1.62e-07,34;UBERON:0010314,1.93e-07,132;UBERON:0002791,3.95e-07,32;UBERON:0001869,7.18e-07,32 | |||
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| ||
|short_description=p2@JPX | |short_description=p2@JPX | ||
}} | }} |
Latest revision as of 10:23, 16 September 2015
Short description: | p2@JPX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_JPX_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NR_024582, uc004ebo.2, uc004ebp.2_5end |
EntrezGene: | JPX |
HGNC: | 37191 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 5.78e-13 | 56 |
neural rod | 5.78e-13 | 56 |
future spinal cord | 5.78e-13 | 56 |
neural keel | 5.78e-13 | 56 |
regional part of nervous system | 4.35e-12 | 53 |
regional part of brain | 4.35e-12 | 53 |
neurectoderm | 1.03e-10 | 86 |
regional part of forebrain | 1.20e-10 | 41 |
forebrain | 1.20e-10 | 41 |
anterior neural tube | 1.20e-10 | 41 |
future forebrain | 1.20e-10 | 41 |
central nervous system | 2.19e-10 | 81 |
neural plate | 2.45e-10 | 82 |
presumptive neural plate | 2.45e-10 | 82 |
nervous system | 1.09e-09 | 89 |
pre-chordal neural plate | 2.54e-09 | 61 |
brain | 2.49e-08 | 68 |
future brain | 2.49e-08 | 68 |
brain grey matter | 8.49e-08 | 34 |
gray matter | 8.49e-08 | 34 |
ecto-epithelium | 1.52e-07 | 104 |
telencephalon | 1.62e-07 | 34 |
structure with developmental contribution from neural crest | 1.93e-07 | 132 |
regional part of telencephalon | 3.95e-07 | 32 |
cerebral hemisphere | 7.18e-07 | 32 |