FFCP PHASE1:Hg19::chr16:31141328..31141350,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:31141328..31141350,+
|short_description=p2@KAT8
|description=CAGE_peak_2_at_KAT8_5end
|association_with_transcript=0bp_to_uc002ebb.2_5end
|EntrezGene=841...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84148 | |EntrezGene=84148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17933 | |HGNC=17933 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002ebb.2_5end | |||
|cluster_id=chr16:31141328..31141350,+ | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_2_at_KAT8_5end | |||
|id=chr16:31141328..31141350,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.23e-21!76;CL:0002009!3.00e-18!65;CL:0000557!4.84e-18!71;CL:0002194!1.04e-17!63;CL:0000576!1.04e-17!63;CL:0000040!1.04e-17!63;CL:0000559!1.04e-17!63;CL:0000839!4.32e-17!70;CL:0002057!1.86e-16!42;CL:0000860!8.12e-15!45;CL:0000763!4.71e-13!112;CL:0000049!4.71e-13!112;CL:0000738!6.58e-11!140;CL:0002087!4.25e-08!119;CL:0002031!4.42e-08!124;CL:0000037!4.03e-07!172;CL:0000566!4.03e-07!172;CL:0002032!5.62e-07!165;CL:0000837!5.62e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.93e-19;39!CL:0000234;5.93e-19;39!CL:0000840;6.23e-17;5!CL:0000235;1.38e-16;6!CL:0000990;1.77e-11;8!CL:0000860;4.77e-10;33!CL:0002057;4.77e-10;33!CL:0000451;1.74e-09;10!CL:0000766;9.96e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.59e-26,72;CL:0002194,1.72e-23,59;CL:0000576,1.72e-23,59;CL:0000040,1.72e-23,59;CL:0000559,1.72e-23,59;CL:0002009,1.12e-22,61;CL:0000839,7.37e-21,66;CL:0000557,1.58e-20,67;CL:0000840,6.23e-17,5;CL:0001029,6.23e-17,5;CL:0000763,7.29e-17,108;CL:0000049,7.29e-17,108;CL:0000235,1.46e-16,6;CL:0000473,1.95e-16,48;CL:0000234,1.95e-16,48;CL:0000738,5.42e-13,136;CL:0000990,1.77e-11,8;CL:0002087,2.62e-11,115;CL:0002031,9.12e-11,120;CL:0002032,1.16e-10,161;CL:0000837,1.16e-10,161;CL:0000037,3.95e-10,168;CL:0000988,1.65e-09,177;CL:0000451,1.74e-09,10;CL:0000860,1.73e-08,42;CL:0002057,1.73e-08,42 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.13e-11;1!CL:0002057;9.91e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.59e-15!102;UBERON:0003061!5.59e-15!102;UBERON:0002371!9.52e-15!80;UBERON:0001474!5.84e-13!86;UBERON:0004765!1.49e-12!101;UBERON:0001434!1.49e-12!101;UBERON:0002193!1.62e-12!112;UBERON:0002405!1.33e-09!115;UBERON:0007023!1.21e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;3.64e-12;1!UBERON:0002171;4.53e-12;1!UBERON:0006518;4.53e-12;1!UBERON:0008949;4.53e-12;1!UBERON:0000101;4.53e-12;1!UBERON:0002167;4.53e-12;1!UBERON:0001831;1.13e-11;1!UBERON:0001567;1.13e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.29e-18,76;UBERON:0001474,1.66e-16,82;UBERON:0004765,6.67e-15,90;UBERON:0002405,2.27e-14,93;UBERON:0002390,1.48e-13,98;UBERON:0003061,1.48e-13,98;UBERON:0001434,2.98e-13,100;UBERON:0001301,3.65e-12,1;UBERON:0002193,3.78e-12,108;UBERON:0002171,4.53e-12,1;UBERON:0006518,4.53e-12,1;UBERON:0008949,4.53e-12,1;UBERON:0000101,4.53e-12,1;UBERON:0002167,4.53e-12,1;UBERON:0001831,1.63e-11,1;UBERON:0001567,1.63e-11,1;UBERON:0008801,1.63e-11,1;UBERON:0002204,3.02e-07,167;UBERON:0003081,8.76e-07,203 | |||
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| ||
|short_description=p2@KAT8 | |||
}} | }} |
Latest revision as of 11:11, 16 September 2015
Short description: | p2@KAT8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KAT8_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 0bp_to_uc002ebb.2_5end |
EntrezGene: | KAT8 |
HGNC: | 17933 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.59e-26 | 72 |
monopoietic cell | 1.72e-23 | 59 |
monocyte | 1.72e-23 | 59 |
monoblast | 1.72e-23 | 59 |
promonocyte | 1.72e-23 | 59 |
macrophage dendritic cell progenitor | 1.12e-22 | 61 |
myeloid lineage restricted progenitor cell | 7.37e-21 | 66 |
granulocyte monocyte progenitor cell | 1.58e-20 | 67 |
immature conventional dendritic cell | 6.23e-17 | 5 |
common dendritic progenitor | 6.23e-17 | 5 |
myeloid cell | 7.29e-17 | 108 |
common myeloid progenitor | 7.29e-17 | 108 |
macrophage | 1.46e-16 | 6 |
defensive cell | 1.95e-16 | 48 |
phagocyte | 1.95e-16 | 48 |
leukocyte | 5.42e-13 | 136 |
conventional dendritic cell | 1.77e-11 | 8 |
nongranular leukocyte | 2.62e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 9.12e-11 | 120 |
hematopoietic oligopotent progenitor cell | 1.16e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.16e-10 | 161 |
hematopoietic stem cell | 3.95e-10 | 168 |
hematopoietic cell | 1.65e-09 | 177 |
dendritic cell | 1.74e-09 | 10 |
classical monocyte | 1.73e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.73e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.29e-18 | 76 |
bone element | 1.66e-16 | 82 |
skeletal element | 6.67e-15 | 90 |
immune system | 2.27e-14 | 93 |
hematopoietic system | 1.48e-13 | 98 |
blood island | 1.48e-13 | 98 |
skeletal system | 2.98e-13 | 100 |
epididymis | 3.65e-12 | 1 |
hemolymphoid system | 3.78e-12 | 108 |
lower lobe of right lung | 4.53e-12 | 1 |
right lung lobe | 4.53e-12 | 1 |
lower lobe of lung | 4.53e-12 | 1 |
lobe of lung | 4.53e-12 | 1 |
right lung | 4.53e-12 | 1 |
parotid gland | 1.63e-11 | 1 |
cheek | 1.63e-11 | 1 |
parotid gland primordium | 1.63e-11 | 1 |
musculoskeletal system | 3.02e-07 | 167 |
lateral plate mesoderm | 8.76e-07 | 203 |