FFCP PHASE1:Hg19::chr16:3115418..3115429,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9235 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16830 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=13bp_to_ENST00000528163_5end | |||
|cluster_id=chr16:3115418..3115429,+ | |||
|coexpression_cluster_id=C2371 | |||
|description=CAGE_peak_4_at_IL32_5end | |||
|id=chr16:3115418..3115429,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.21e-16!119;CL:0000213!1.37e-12!57;CL:0000215!1.37e-12!57;CL:0002078!2.00e-12!44;CL:0002139!1.32e-10!24;CL:0000115!1.79e-10!35;CL:1000497!4.52e-09!18;CL:0002518!4.52e-09!18;CL:0000220!2.13e-08!246;CL:0002321!2.59e-08!248;CL:1000449!3.25e-08!16;CL:0000071!6.55e-07!18;CL:0002546!6.55e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000497;6.56e-12;17!CL:0002518;6.56e-12;17!CL:1000449;6.55e-11;15!CL:0002139;1.26e-10;24!CL:0000115;7.86e-10;36!CL:0002078;3.00e-09;45!CL:0002681;8.14e-09;12!CL:0002584;8.14e-09;12!CL:0000213;1.98e-08;58!CL:0000215;1.98e-08;58!CL:1000507;8.77e-08;10!CL:1000494;8.77e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.56e-15,121;CL:0002078,1.48e-13,45;CL:0000213,1.99e-13,58;CL:0000215,1.99e-13,58;CL:1000497,3.87e-12,17;CL:0002518,3.87e-12,17;CL:0000115,1.80e-11,36;CL:1000449,4.15e-11,15;CL:0002139,1.02e-10,24;CL:0002681,5.36e-09,12;CL:0002584,5.36e-09,12;CL:1000507,6.11e-08,10;CL:1000494,6.11e-08,10;CL:0002321,9.99e-07,250 | |||
|ontology_enrichment_development_v019=UBERON:0003104;6.77e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!6.54e-25!118;UBERON:0000490!1.68e-18!138;UBERON:0005172!6.35e-15!55;UBERON:0005173!6.35e-15!55;UBERON:0000055!9.94e-15!69;UBERON:0004111!1.41e-14!241;UBERON:0004872!1.53e-14!84;UBERON:0005256!2.90e-14!143;UBERON:0002417!8.12e-14!61;UBERON:0000916!8.12e-14!61;UBERON:0003104!2.45e-13!238;UBERON:0009142!2.45e-13!238;UBERON:0002100!1.79e-12!216;UBERON:0001009!2.08e-12!113;UBERON:0003103!2.82e-12!69;UBERON:0000483!4.85e-12!309;UBERON:0000477!4.87e-12!286;UBERON:0000119!1.23e-11!312;UBERON:0004535!1.74e-11!110;UBERON:0002049!2.07e-11!79;UBERON:0007798!2.07e-11!79;UBERON:0001981!3.99e-11!60;UBERON:0007500!3.99e-11!60;UBERON:0004537!3.99e-11!60;UBERON:0006965!3.99e-11!60;UBERON:0000025!5.14e-11!194;UBERON:0009569!1.29e-09!113;UBERON:0003929!1.36e-09!54;UBERON:0001008!3.61e-09!45;UBERON:0000466!3.62e-09!126;UBERON:0005177!3.83e-09!107;UBERON:0000481!5.83e-09!347;UBERON:0006554!5.90e-09!44;UBERON:0000353!1.02e-08!17;UBERON:0003064!1.31e-08!37;UBERON:0005057!2.06e-08!26;UBERON:0006555!2.74e-08!17;UBERON:0005103!2.74e-08!17;UBERON:0000083!2.74e-08!17;UBERON:0009201!2.74e-08!17;UBERON:0004819!2.74e-08!17;UBERON:0006553!2.74e-08!17;UBERON:0003074!2.74e-08!17;UBERON:0003060!2.74e-08!17;UBERON:0004211!3.25e-08!16;UBERON:0001285!3.25e-08!16;UBERON:0007684!3.25e-08!16;UBERON:0003220!3.25e-08!16;UBERON:0004208!3.25e-08!16;UBERON:0003886!3.97e-08!63;UBERON:0003887!4.73e-08!21;UBERON:0004876!5.14e-08!20;UBERON:0009497!6.02e-08!25;UBERON:0000015!6.02e-08!25;UBERON:0002423!6.02e-08!25;UBERON:0006235!6.02e-08!25;UBERON:0004161!6.02e-08!25;UBERON:0005911!1.04e-07!82;UBERON:0002107!1.48e-07!19;UBERON:0006925!1.48e-07!19;UBERON:0008836!1.48e-07!19;UBERON:0009854!1.85e-07!23;UBERON:0002113!2.24e-07!27;UBERON:0003918!2.24e-07!27;UBERON:0005095!2.24e-07!27;UBERON:0007687!2.24e-07!27;UBERON:0000080!2.64e-07!18;UBERON:0002120!2.64e-07!18;UBERON:0004875!2.64e-07!18;UBERON:0005721!2.64e-07!18;UBERON:0005754!2.64e-07!18;UBERON:0007297!2.64e-07!18;UBERON:0008835!3.04e-07!22;UBERON:0003894!3.04e-07!22;UBERON:0000489!3.06e-07!32;UBERON:0001986!6.55e-07!18;UBERON:0004638!6.55e-07!18;UBERON:0004852!6.55e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.39e-11;30!UBERON:0001008;1.39e-11;30!UBERON:0005172;1.45e-11;52!UBERON:0005173;1.45e-11;52!UBERON:0000353;5.84e-11;15!UBERON:0006555;6.55e-11;15!UBERON:0004819;6.55e-11;15!UBERON:0001285;6.55e-11;15!UBERON:0007684;6.55e-11;15!UBERON:0002113;1.25e-10;24!UBERON:0011143;1.25e-10;24!UBERON:0000489;1.67e-10;29!UBERON:0002417;1.24e-09;58!UBERON:0000916;1.24e-09;58!UBERON:0002423;3.85e-09;25!UBERON:0001225;8.14e-09;12!UBERON:0008987;8.14e-09;12!UBERON:0001851;1.25e-08;15!UBERON:0002107;2.54e-08;19!UBERON:0006925;2.54e-08;19!UBERON:0003103;4.07e-08;61!UBERON:0004211;8.77e-08;10!UBERON:0009773;8.77e-08;10!UBERON:0001231;8.77e-08;10!UBERON:0004810;8.77e-08;10!UBERON:0003914;2.45e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.70e-27,117;UBERON:0003104,6.28e-19,160;UBERON:0009142,6.28e-19,160;UBERON:0005172,9.85e-19,54;UBERON:0005173,9.85e-19,54;UBERON:0002417,1.70e-16,60;UBERON:0000916,1.70e-16,60;UBERON:0002100,4.90e-15,199;UBERON:0003103,8.41e-15,68;UBERON:0000055,1.23e-14,68;UBERON:0004111,2.68e-14,240;UBERON:0000490,4.65e-14,148;UBERON:0005256,1.48e-13,122;UBERON:0004872,1.80e-13,83;UBERON:0005177,3.19e-12,101;UBERON:0009569,2.59e-11,112;UBERON:0001008,2.66e-11,48;UBERON:0006555,3.82e-11,16;UBERON:0004819,3.82e-11,16;UBERON:0000353,3.93e-11,15;UBERON:0004211,4.15e-11,15;UBERON:0009773,4.15e-11,15;UBERON:0001231,4.15e-11,15;UBERON:0001285,4.15e-11,15;UBERON:0007684,4.15e-11,15;UBERON:0004208,4.15e-11,15;UBERON:0001009,4.23e-11,112;UBERON:0006554,4.85e-11,47;UBERON:0002049,8.56e-11,78;UBERON:0007798,8.56e-11,78;UBERON:0007500,2.38e-10,59;UBERON:0001981,2.38e-10,59;UBERON:0004537,2.38e-10,59;UBERON:0006965,2.38e-10,59;UBERON:0003929,2.77e-10,54;UBERON:0002113,3.58e-10,26;UBERON:0003918,3.58e-10,26;UBERON:0011143,3.58e-10,26;UBERON:0005095,3.58e-10,26;UBERON:0007687,3.58e-10,26;UBERON:0004535,4.16e-10,109;UBERON:0000489,4.51e-10,31;UBERON:0000025,5.95e-10,192;UBERON:0001225,5.36e-09,12;UBERON:0008987,5.36e-09,12;UBERON:0009497,5.54e-09,25;UBERON:0000015,5.54e-09,25;UBERON:0002423,5.54e-09,25;UBERON:0006235,5.54e-09,25;UBERON:0004161,5.54e-09,25;UBERON:0005911,6.89e-09,82;UBERON:0000483,7.17e-09,306;UBERON:0001851,8.53e-09,15;UBERON:0000119,1.98e-08,309;UBERON:0009854,2.17e-08,23;UBERON:0002107,3.36e-08,19;UBERON:0006925,3.36e-08,19;UBERON:0008836,3.36e-08,19;UBERON:0008835,3.98e-08,22;UBERON:0003894,3.98e-08,22;UBERON:0004810,6.11e-08,10;UBERON:0009856,2.32e-07,26;UBERON:0007499,4.25e-07,25;UBERON:0003064,4.95e-07,28 | |||
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| |||
|short_description=p4@IL32 | |||
}} |
Latest revision as of 11:27, 16 September 2015
Short description: | p4@IL32 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IL32_5end |
Coexpression cluster: | C2371_Renal_Lymphatic_Alveolar_migratory_Endothelial_heart_tongue |
Association with transcript: | 13bp_to_ENST00000528163_5end |
EntrezGene: | IL32 |
HGNC: | 16830 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.56e-15 | 121 |
meso-epithelial cell | 1.48e-13 | 45 |
lining cell | 1.99e-13 | 58 |
barrier cell | 1.99e-13 | 58 |
kidney cell | 3.87e-12 | 17 |
kidney epithelial cell | 3.87e-12 | 17 |
endothelial cell | 1.80e-11 | 36 |
epithelial cell of nephron | 4.15e-11 | 15 |
endothelial cell of vascular tree | 1.02e-10 | 24 |
kidney cortical cell | 5.36e-09 | 12 |
renal cortical epithelial cell | 5.36e-09 | 12 |
kidney tubule cell | 6.11e-08 | 10 |
nephron tubule epithelial cell | 6.11e-08 | 10 |
embryonic cell | 9.99e-07 | 250 |