FFCP PHASE1:Hg19::chr10:116164270..116164290,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84632 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25901 | |||
|TSSclassifier=strong | |||
|UniProt=F5GZE1 | |||
|association_with_transcript=-10bp_to_ENST00000545353_5end | |||
|cluster_id=chr10:116164270..116164290,- | |||
|coexpression_cluster_id=C2982 | |||
|description=CAGE_peak_2_at_AFAP1L2_5end | |||
|id=chr10:116164270..116164290,- | |||
|ontology_enrichment_celltype=CL:0000066!2.46e-12!254;CL:0002076!6.98e-12!43;CL:0000223!8.31e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.82e-10;42!CL:0002368;2.55e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.66e-13,42;CL:0000223,4.51e-10,58;CL:0000066,2.96e-09,253;CL:0002368,2.44e-07,13;CL:0002159,9.93e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!4.14e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.21e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.08e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.32e-20!115;UBERON:0004121!9.77e-14!169;UBERON:0000153!3.53e-13!129;UBERON:0007811!3.53e-13!129;UBERON:0000064!6.17e-13!219;UBERON:0000924!1.14e-12!173;UBERON:0006601!1.14e-12!173;UBERON:0000033!1.85e-12!123;UBERON:0001017!5.59e-12!82;UBERON:0000955!1.08e-11!69;UBERON:0006238!1.08e-11!69;UBERON:0005743!3.22e-11!86;UBERON:0000062!4.34e-11!511;UBERON:0001049!3.48e-10!57;UBERON:0005068!3.48e-10!57;UBERON:0006241!3.48e-10!57;UBERON:0007135!3.48e-10!57;UBERON:0000475!6.34e-10!365;UBERON:0002616!8.35e-10!59;UBERON:0003075!1.14e-09!86;UBERON:0007284!1.14e-09!86;UBERON:0004119!2.41e-09!169;UBERON:0000925!2.41e-09!169;UBERON:0006595!2.41e-09!169;UBERON:0000073!6.51e-09!94;UBERON:0001016!6.51e-09!94;UBERON:0000467!8.80e-09!625;UBERON:0000481!9.21e-09!347;UBERON:0000480!1.20e-08!626;UBERON:0002346!1.89e-08!90;UBERON:0000922!2.19e-08!612;UBERON:0000468!9.11e-08!659;UBERON:0002050!1.77e-07!605;UBERON:0005423!1.77e-07!605;UBERON:0000923!3.70e-07!604;UBERON:0005291!3.70e-07!604;UBERON:0006598!3.70e-07!604;UBERON:0002532!3.70e-07!604;UBERON:0000119!3.95e-07!312;UBERON:0001008!4.33e-07!45;UBERON:0000483!4.90e-07!309;UBERON:0005177!8.16e-07!107;UBERON:0005631!9.57e-07!14;UBERON:0000158!9.57e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.20e-07;30!UBERON:0001008;1.20e-07;30!UBERON:0000974;6.51e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.12e-16,114;UBERON:0004121,2.70e-10,171;UBERON:0000924,2.70e-10,171;UBERON:0006601,2.70e-10,171;UBERON:0001008,3.18e-10,48;UBERON:0010371,3.93e-10,104;UBERON:0006554,1.55e-09,47;UBERON:0004119,4.75e-09,160;UBERON:0000925,4.75e-09,160;UBERON:0006595,4.75e-09,160;UBERON:0000922,1.11e-08,592;UBERON:0011216,1.56e-08,223;UBERON:0005423,1.71e-08,581;UBERON:0001049,3.09e-07,56;UBERON:0005068,3.09e-07,56;UBERON:0006241,3.09e-07,56;UBERON:0007135,3.09e-07,56;UBERON:0001017,3.21e-07,81;UBERON:0000955,3.23e-07,68;UBERON:0006238,3.23e-07,68;UBERON:0000489,5.30e-07,31;UBERON:0005631,7.22e-07,14;UBERON:0000158,7.22e-07,14;UBERON:0005177,7.58e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,5.46103430325431,0.791300934685361,0,0,0,0,0,0,2.46242116153576,0.204000691244253,1.56727360739044,0.572471974262113,0.821246550437305,0,0.229240217243854,0.410502947249729,0.314843125254717,0,0,0,1.83884244895785,5.72291245678675,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,1.15106533222573,1.10540007114339,1.15921234294021,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0,0,0,0,0,0,1.89069634328136,1.77383517970051,0.43917392846563,1.24430121722827,4.00724817121796,4.82019775619758,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0,1.00416183829401,0.402829317109147,0,0.732186172644509,0,0,0.267899184852239,0.673588117878509,0.225222960966644,0,0,0,0,0,4.79703457356788,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,1.64025002283658,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0.247266929278557,0,0.718618141816238,0.336672227908132,0,0,0,0,0.150238058906597,0,0,0.427114777637135,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83152132908242,4.09119180886252,5.44928731239107,0.243947412259191,0,0.232387885739037,0.725627385107593,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,2.8810180793198,0,0,0,0.590789906681404,0,0.245976877086227,0.343135620597051,4.82901255797952,3.37205259772859,5.42856451022807,2.40729957412177,0.977424915930974,0,0,0.231860809950154,0,0,0.462985512576611,0,0,0,0,0,0,1.87467667973554,6.71928512795438,4.67857820899875,2.23896306757121,3.77824120068151,9.58456697913028,0,0,0,0,0,0,0,0,0,0.822619941626588,0.901029173531752,0,1.34557301214433,0,0.22001485746285,0.387815147273333,0,0,1.06375246633948,0,0,0,0,0.142977993658148,0,0,0.65147236858747,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0.783204629850962,1.02943027143257,0,0,0,0.909382714338778,3.32870879020994,3.0239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,4.61164881697555,2.30202472339741,0.34444334449382,0,0.131124414959424,1.35359883872224,1.07821471946181,2.35304930753057,1.46139224653261,0.73886140225013,0,0,0,1.54227252690289,1.89662506280697,1.00337954770971,6.37190682612596,1.66215201785745,2.68649705666614,0,0,0,0,0,0.515205058238611,0,0.082509499920588,3.44559322797703,5.20048196829217,0,0.193341436584244,0,0,0.137836572484531,0,0,0.0852266274161009,0.267096106940212,3.96683796866347,1.92190067365106,2.93509238737543,2.2254711788221,0,0,0,0,0,0,0,0,1.48863347743867,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,4.13755084719702,3.35151137767894,6.53345909167936,1.03558180854457,8.17960208075337,6.73885902670502,3.10401107475673,3.90529780351831,0,0,0,0,0,0,0.540031437238115,0,0,1.92495971052672,3.92064345569651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,3.55567026775618,0.879049075631364,0,0,1.13654458722565,2.86493381685228,3.26661148915902,4.60741053148848,0,1.40669416410513,0,0,0,2.19172787076177,2.21027132424918,0,5.11343412510774,0,0.622079175323615,5.30223271769228,0,0,1.87422470710174,2.3948309234694,0,4.84666373047609,1.66982576691332,1.99613798001194,0,0,2.89999830173917,2.50345586228099,1.01701460117107,0,0,0,0.868124974666461,0,0.964771509003264,1.52581736317083,10.3944504335351,6.50204761697804,1.53569778007781,0,1.81250867562184,4.84786628573922,0,0,0,2.17294743844016,1.5950057986596,2.74792780205587,5.33034776018635,0,0.31396051279005,0,0,0,0,0,0,0,0.652931232636591,0.282706142867882,0,0.995261931078505,0.353830258013357,0,2.37216902944498,4.81899361891361,5.01225357626186,0.539209063845416,4.81546588379273,0.234264445725339,0,1.17398771359254,0,3.94584402849391,1.20990716048664,0,0.821425535170343,0,0.311064574191741,1.32930774541437,0.330991955875499,0.941798755221676,0,0,0.416024019039416,6.59527005673497,5.38958185779077,4.26590112243973,3.14508002835654,0,0,0,0,1.26085721434945,0.264768380074501,1.58186518546373,0.685209623233754,0,2.02594547058812,1.56441106187842,4.64921157458896,1.49417096317547,0.39961921916426,4.17862209746907,0,0,0,0,2.59263438078475,0.135904206073614,0.313808538937,1.73396969981747,0.577901179803038,0.600420288709789,1.50595916781192,0,0.859530882839914,0.262887354279314,2.51354161145029,1.60412296808179,0.717873024576814,1.39775300349294,0,0.223171457441873,0.940568614814168,0,0,0,0,0,0.984274815147488,0,1.59045937961861,1.77064427945048,0.803765742325096,1.10031549277787,1.66176135211674,0,0,2.30848315300494,2.68347750079413,1.10327990218877,3.51445740504487,0.105600336519406,0,2.49489756515279,1.42939065274673,0,0,0,0,0,0,0,0.170388021785422,2.37955392192264,0.146552233678082,0,1.0342636508924,1.98348902614035,0.342173675768659,2.81926008926669,1.06787412567695,2.20086027139532,0.414239055347196,0,0,0,4.46838880439127,0,0.2506898940227,0,0.655745261419609,5.9680556575089,0,1.34228891392159,0.876336514945499,1.14681839138014,2.10765197920019,1.73869928235874,0,2.62458856720424,0,1.14186133417987,2.35265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776314784381297,0,0,2.60872530905867,0.300515217994437,0.761610424337591,0,0,0.537052785212442,0,0.796191777397232,0,0,0,2.52369796457302,2.88929745610955,0.643324774124777,0,1.36023555307363,1.85217979459067,0,0.358177682162975,1.54400723580486,0.657852148736121,0.530067437837643,0.192914038270915,0.168942440653073,0,0,0,2.48865185073115,0,0,0,1.63804924423206,0.245772908753719,8.45248493434508,0.59996218756479,0,0,1.70254786070051,0,1.39879507719444,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,1.531227386766,1.02766760154335,1.41696576325585,1.59633859057151,1.23069818544453,0.756215088665154,1.38314504928436,3.06803726700517,1.42769420259154,8.4407037910882,4.71878893390961,1.83428598521679,7.39364263362165,0,0,0,2.25630985047772,0.20170506870352,3.90757005616546,0,0,6.06209953489886,1.75597720007826,0,1.44680757550829,1.8390584956233,0,0,2.97726707033577,0,1.78867398695433,2.14280734351315,0.672567444437648,0,0,1.5966426629275,0.345701962667338,1.20041606606193,0.815636795721981,0.920818829879887,2.2456829767954,0,2.59027206406696,1.09980912941201,0,4.56579360254748,0.215927591218621,4.29976519098345,2.07281978112303,0,0,0,0,0,0,0,0,0,0,4.65725755210022,4.35303050233695,0.93061915699296,2.8666168169323,0.111855431797792,2.55190607399632,0.487671699929078,0.647428837187895,0.513314034281235,5.799072156691,1.94284397223656,0,1.98950775161368,0.118920090777569,0.11294608203896,0,0,0.771741581079447,1.09279780251979,0.470317296361523,1.22574160876953,0,2.74831853960923,0,3.8039015482506,0,7.61269735636814,9.92651474793089,0,5.71372603538104,2.11736923029415,0,2.92134555298607,1.37618785021362,2.29343333042322,0,2.44769364687293,0,1.0580536810308,0,0,0,4.66815771889792,0.218531143927391,0.380095503034311,0.509944148709909,0.26721740526556,0.735159196278759,0.250707539292375,0.757786982182394,0.803892390468535,0,0.517164979309476,2.13233981900981,8.09419066976717,1.29177819672012,1.30356900021302,1.6819779387092,9.16519079205575,9.29739069207809,2.39488422686657,1.02669990325584,1.0776328482334,0.502055437748735,2.66128285236811,4.39577650499262,0.106727345877715,0,5.38951212639521,0,5.50086498822899,7.73102738799903,5.3260541934841,1.81146414231924,1.9234109538194 | |||
|short_description=p2@AFAP1L2 | |||
}} |
Latest revision as of 12:36, 16 September 2015
Short description: | p2@AFAP1L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AFAP1L2_5end |
Coexpression cluster: | C2982_thyroid_oral_throat_spleen_ductus_uterus_cerebellum |
Association with transcript: | -10bp_to_ENST00000545353_5end |
EntrezGene: | AFAP1L2 |
HGNC: | 25901 |
UniProt: | F5GZE1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.66e-13 | 42 |
endodermal cell | 4.51e-10 | 58 |
epithelial cell | 2.96e-09 | 253 |
respiratory epithelial cell | 2.44e-07 | 13 |
general ecto-epithelial cell | 9.93e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.12e-16 | 114 |
ectoderm-derived structure | 2.70e-10 | 171 |
ectoderm | 2.70e-10 | 171 |
presumptive ectoderm | 2.70e-10 | 171 |
renal system | 3.18e-10 | 48 |
ecto-epithelium | 3.93e-10 | 104 |
urinary system structure | 1.55e-09 | 47 |
endoderm-derived structure | 4.75e-09 | 160 |
endoderm | 4.75e-09 | 160 |
presumptive endoderm | 4.75e-09 | 160 |
embryo | 1.11e-08 | 592 |
organ system subdivision | 1.56e-08 | 223 |
developing anatomical structure | 1.71e-08 | 581 |
neural tube | 3.09e-07 | 56 |
neural rod | 3.09e-07 | 56 |
future spinal cord | 3.09e-07 | 56 |
neural keel | 3.09e-07 | 56 |
central nervous system | 3.21e-07 | 81 |
brain | 3.23e-07 | 68 |
future brain | 3.23e-07 | 68 |
cavitated compound organ | 5.30e-07 | 31 |
extraembryonic membrane | 7.22e-07 | 14 |
membranous layer | 7.22e-07 | 14 |
trunk region element | 7.58e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.08e-09 | 14 |