FFCP PHASE1:Hg19::chr19:18112074..18112107,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:18112074..18112107,+
|short_description=p4@ARRDC2
|description=CAGE_peak_4_at_ARRDC2_5end
|association_with_transcript=130bp_to_ENST00000379656,NM_0010256...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27106 | |EntrezGene=27106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25225 | |HGNC=25225 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TBH0 | |UniProt=Q8TBH0 | ||
|association_with_transcript=130bp_to_ENST00000379656,NM_001025604,uc002nhu.2_5end | |||
|cluster_id=chr19:18112074..18112107,+ | |||
|coexpression_cluster_id=C448 | |||
|description=CAGE_peak_4_at_ARRDC2_5end | |||
|id=chr19:18112074..18112107,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.24e-34!140;CL:0000037!4.63e-33!172;CL:0000566!4.63e-33!172;CL:0002032!9.23e-30!165;CL:0000837!9.23e-30!165;CL:0000988!2.81e-29!182;CL:0000766!1.02e-27!76;CL:0000763!8.88e-26!112;CL:0000049!8.88e-26!112;CL:0002057!9.60e-26!42;CL:0002087!1.67e-25!119;CL:0000860!3.13e-25!45;CL:0002031!3.75e-25!124;CL:0000557!6.91e-24!71;CL:0002009!1.12e-22!65;CL:0002194!1.04e-21!63;CL:0000576!1.04e-21!63;CL:0000040!1.04e-21!63;CL:0000559!1.04e-21!63;CL:0000839!1.53e-21!70;CL:0002393!1.76e-07!9;CL:0002397!1.76e-07!9;CL:0000094!6.81e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.39e-33;33!CL:0002057;1.39e-33;33!CL:0000473;4.36e-28;39!CL:0000234;4.36e-28;39!CL:0000576;6.99e-27;48!CL:0000766;5.21e-24;69!CL:0002087;7.09e-14;104!CL:0000738;1.68e-12;136!CL:0000763;2.90e-12;100!CL:0000094;6.64e-12;8!CL:0002393;3.05e-09;6!CL:0002397;3.05e-09;6!CL:0000624;3.78e-09;6!CL:0000081;4.72e-08;11!CL:0000988;7.10e-08;177!CL:0000791;2.08e-07;18!CL:0000789;2.08e-07;18!CL:0002419;2.08e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.19e-56,136;CL:0000766,1.87e-51,72;CL:0000473,1.14e-48,48;CL:0000234,1.14e-48,48;CL:0000860,1.24e-48,42;CL:0002057,1.24e-48,42;CL:0000037,5.59e-48,168;CL:0000988,5.78e-44,177;CL:0000557,6.21e-44,67;CL:0002031,1.25e-43,120;CL:0002087,3.10e-43,115;CL:0002032,8.44e-43,161;CL:0000837,8.44e-43,161;CL:0002009,7.60e-41,61;CL:0000839,1.63e-39,66;CL:0002194,5.82e-39,59;CL:0000576,5.82e-39,59;CL:0000040,5.82e-39,59;CL:0000559,5.82e-39,59;CL:0000763,5.43e-37,108;CL:0000049,5.43e-37,108;CL:0000134,2.13e-13,354;CL:0002393,4.76e-13,9;CL:0002397,4.76e-13,9;CL:0002320,1.36e-12,361;CL:0000094,6.46e-12,8;CL:0000219,7.80e-10,386;CL:0000624,3.56e-09,6;CL:0000081,4.63e-08,11;CL:0000791,1.91e-07,18;CL:0000789,1.91e-07,18;CL:0002420,1.91e-07,18;CL:0002419,1.91e-07,18;CL:0000790,1.91e-07,18;CL:0000048,2.31e-07,427;CL:0000034,3.43e-07,441;CL:0000838,5.84e-07,52;CL:0000723,6.36e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.06e-34;42!CL:0000049;1.53e-10;108!CL:0000790;2.08e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.67e-25!102;UBERON:0003061!1.67e-25!102;UBERON:0002193!1.14e-23!112;UBERON:0002371!9.12e-22!80;UBERON:0001474!4.58e-20!86;UBERON:0004765!4.10e-18!101;UBERON:0001434!4.10e-18!101;UBERON:0002405!7.82e-13!115;UBERON:0007023!2.76e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.75e-46,98;UBERON:0003061,4.75e-46,98;UBERON:0002193,5.31e-41,108;UBERON:0002371,5.74e-41,76;UBERON:0001474,1.50e-36,82;UBERON:0002405,2.69e-35,93;UBERON:0004765,1.33e-31,90;UBERON:0001434,5.25e-29,100;UBERON:0003081,9.68e-18,203;UBERON:0002384,1.84e-12,371;UBERON:0002204,4.91e-12,167 | |||
|phase1_expression=0.363356758541113,0,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0.305653622991805,0,0,15.7345710739562,9.97956435052753,20.7453605243542,0.919421224478927,0.30120591877825,0,0.46480320348181,0,1.46800219667424,7.20194031091441,12.6343001906189,10.199510923645,0,0.647787332037959,1.03030227053675,7.12451370019867,12.0920301980419,13.3421233653299,5.81072592264212,6.16751832032739,5.88442104700697,1.43846196161075,2.0492856522328,2.36482229888585,2.75796544589295,5.80936215225443,5.41705946377367,10.9180556934711,11.7349644524874,8.98893937780339,9.48860066349798,7.06043859567406,11.5080682643827,3.62836430205388,2.19410023383795,2.55734850319616,3.77272010217159,3.97169657283798,6.22822248995575,2.51248665256743,2.08593167368081,2.38907729175628,3.02699751316684,2.57794345191295,3.16462387440884,11.8302960334687,18.9217826968889,10.4829322754188,6.9643751310827,9.91167492753942,3.53596290733576,13.1105862120974,16.3111675303254,7.12390199682072,3.51992488922645,1.09227722252426,2.66852776159066,0.426730222566507,1.20118796110804,2.87376219977242,0.661044872784862,0,23.3377317334874,48.7406867177879,48.5486999719041,7.93027971474155,16.8152568894461,0.790152254325231,10.0321982758055,18.8645166119599,23.8497738839431,0.501559486172034,15.3183465317787,6.15482147455153,9.74133642039557,1.6711568532776,3.82987679717288,4.2091439970888,0.812411591295047,0.768547918354051,0.520237390239513,0.986627427622057,1.10540007114339,0,6.52460877913066,5.08327573370455,1.04535523804977,0.793165398882963,7.2811893784365,6.8725489096526,2.53019692019503,0.95569624297229,0,0,1.20460095262218,0.511946444617674,0,0.473554504088034,1.64225599384209,15.9269327147539,11.7673686144743,8.11016661743674,0,0.670700859703636,0,1.80719576192283,0.50133791063589,2.31754430337318,0,2.91980922181582,0.0945348171640679,0,0,0.523916301990851,0.364295288292542,0.370784442784429,0,0.348259474598534,0.398873881556595,3.33886874027479,2.85997455390064,2.22874500797739,0,0,0.347140501607594,0.56530794192401,0.838998872419812,0.550236083880135,0,0.258416759169329,0,0,0.805658634218294,0,0.24406205754817,0,0,0.267899184852239,0,0.112611480483322,0,0,0,56.6655794975072,42.6558290563158,0,0,0,0.264818361626438,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0.490385709340376,0,0,0.234321431833797,0.312160076830321,0.570471821544449,0.597794722207204,0,0,0,0,0,0.413303124703062,0,1.23633464639278,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0.438977620880838,0.30648779579902,1.65261864797256,0.113432183160021,0.358779271377724,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0.337552664482532,0.0974370051611986,0,0.184099797284599,0.161646056818812,0.710019185033229,0,0.339121184620975,0.386521706326594,0.272746120590835,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0.464367928031979,0,0.354920400119532,0,0,0.220587945464788,0.435758888184812,0,0.134831308160164,0.98110732562673,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0.977424915930974,0,0,0,0,0.433099343283221,0.462985512576611,0.951270761172991,0.790204397959275,0.858486162094873,1.23108503043699,0.234004265139238,0.743155811443641,0,0,0,0,0,0,0,1.14462964217194,1.24396869324463,2.88239906833923,2.27236380167484,0.253991577168676,0.381988425558278,0,0,0.308482478109971,0,0.571652865261156,0,0,0.1466765716419,0,3.57656445851882,0,0,0,0.771622122786426,0,1.3321108950805,0,0.542621605391443,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,2.10833939483032,0,0,0,0.144781306667579,0.821905290201534,0.358121926479791,0.336255431980582,10.6396610509041,11.8595166172735,6.67383788654692,0,0,0,0,0,16.478154526838,5.9832291840805,5.8018171881045,0.49076596687656,0,0,0,0,0.157702415033935,0.234282829985426,0.300946099727719,0,6.2083842775503,0.664225598535437,0.184369168541703,0,0.195801157462741,0.343143423810856,9.71809722777571,14.8842798564846,15.7956785549098,0,0,0,0,0,0,0,0,0.64341568457443,0,0,0,0,0.519254429183621,0.348631135379878,0.120859449591622,0.200506470303285,0.184161977871793,0.114814448164607,0.182091168006717,0,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0,3.08454505380579,0,0,0.509752546090077,0,0,0,0.261435451024901,0,0,0,0.721287081534056,0,0.165018999841176,0,0.650060246036521,0,0,0.154048617114644,0,0.137836572484531,0,0.145016693914229,0.255679882248303,0,0.165284915360978,0.192190067365106,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,1.65409603063837,1.99031692572366,0.876901770507525,0,0,0.405820753925408,0.6196469961995,0,0,0.196498082026242,0.35667105148125,0,2.74439925886963,0.987884678879706,0,0,0.0962221127255121,0.670302275535787,2.17781969722645,0.564862804660675,0.43050537267123,0,0,0.229723400206959,1.52234282769651,1.52927441428475,2.278588748696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| ||
|short_description=p4@ARRDC2 | |||
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Latest revision as of 13:34, 16 September 2015
Short description: | p4@ARRDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARRDC2_5end |
Coexpression cluster: | C448_Eosinophils_CD19_Neutrophils_immature_CD14_CD34_CD4 |
Association with transcript: | 130bp_to_ENST00000379656, NM_001025604, uc002nhu.2_5end |
EntrezGene: | ARRDC2 |
HGNC: | 25225 |
UniProt: | Q8TBH0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.75e-46 | 98 |
blood island | 4.75e-46 | 98 |
hemolymphoid system | 5.31e-41 | 108 |
bone marrow | 5.74e-41 | 76 |
bone element | 1.50e-36 | 82 |
immune system | 2.69e-35 | 93 |
skeletal element | 1.33e-31 | 90 |
skeletal system | 5.25e-29 | 100 |
lateral plate mesoderm | 9.68e-18 | 203 |
connective tissue | 1.84e-12 | 371 |
musculoskeletal system | 4.91e-12 | 167 |