FFCP PHASE1:Hg19::chr9:139846820..139846864,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=286256 | |EntrezGene=286256 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28733 | |HGNC=28733 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000491316,ENST00000492820_5end | |association_with_transcript=0bp_to_ENST00000491316,ENST00000492820_5end | ||
|cluster_id=chr9:139846820..139846864,+ | |||
|coexpression_cluster_id=C39 | |coexpression_cluster_id=C39 | ||
|description=CAGE_peak_8_at_LCN12_5end | |description=CAGE_peak_8_at_LCN12_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002188;1.71e-14;5!CL:1000746;9.43e-11;7!CL:1000612;9.43e-11;7!CL:0002681;8.14e-07;12!CL:0002584;8.14e-07;12 | |ontology_enrichment_celltype_v019=CL:0002188;1.71e-14;5!CL:1000746;9.43e-11;7!CL:1000612;9.43e-11;7!CL:0002681;8.14e-07;12!CL:0002584;8.14e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002188,1.60e-14,5;CL:1000746,8.99e-11,7;CL:1000612,8.99e-11,7;CL:0002681,7.92e-07,12;CL:0002584,7.92e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.61e-34;2!UBERON:0007123;1.71e-14;5 | |ontology_enrichment_development_v019=UBERON:0007297;3.61e-34;2!UBERON:0007123;1.71e-14;5 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!5.59e-30!3;UBERON:0004054!5.59e-30!3;UBERON:0005904!1.17e-22!4;UBERON:0003135!1.89e-14!11;UBERON:0001301!2.53e-11!1;UBERON:0000998!3.76e-11!1;UBERON:0006868!3.76e-11!1;UBERON:0001000!4.58e-11!1;UBERON:0005352!4.58e-11!1;UBERON:0001154!6.14e-11!1;UBERON:0001153!6.14e-11!1;UBERON:0001874!9.05e-11!1;UBERON:0002046!1.05e-08!5;UBERON:0004117!1.05e-08!5;UBERON:0007689!1.05e-08!5;UBERON:0007123!1.05e-08!5;UBERON:0003091!1.05e-08!5;UBERON:0007023!2.36e-08!115;UBERON:0003101!2.64e-07!22;UBERON:0000079!2.64e-07!22 | |ontology_enrichment_uberon=UBERON:0006947!5.59e-30!3;UBERON:0004054!5.59e-30!3;UBERON:0005904!1.17e-22!4;UBERON:0003135!1.89e-14!11;UBERON:0001301!2.53e-11!1;UBERON:0000998!3.76e-11!1;UBERON:0006868!3.76e-11!1;UBERON:0001000!4.58e-11!1;UBERON:0005352!4.58e-11!1;UBERON:0001154!6.14e-11!1;UBERON:0001153!6.14e-11!1;UBERON:0001874!9.05e-11!1;UBERON:0002046!1.05e-08!5;UBERON:0004117!1.05e-08!5;UBERON:0007689!1.05e-08!5;UBERON:0007123!1.05e-08!5;UBERON:0003091!1.05e-08!5;UBERON:0007023!2.36e-08!115;UBERON:0003101!2.64e-07!22;UBERON:0000079!2.64e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.23e-66;1!UBERON:0006947;2.62e-23;3!UBERON:0004054;2.62e-23;3!UBERON:0005904;7.35e-18;4!UBERON:0002046;1.71e-14;5!UBERON:0000074;9.43e-11;7!UBERON:0001229;9.43e-11;7!UBERON:0000058;5.73e-08;10!UBERON:0003135;2.32e-07;11!UBERON:0001225;8.14e-07;12!UBERON:0008987;8.14e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0001301;1.23e-66;1!UBERON:0006947;2.62e-23;3!UBERON:0004054;2.62e-23;3!UBERON:0005904;7.35e-18;4!UBERON:0002046;1.71e-14;5!UBERON:0000074;9.43e-11;7!UBERON:0001229;9.43e-11;7!UBERON:0000058;5.73e-08;10!UBERON:0003135;2.32e-07;11!UBERON:0001225;8.14e-07;12!UBERON:0008987;8.14e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.23e-66,1;UBERON:0005103,6.50e-34,8;UBERON:0000083,6.50e-34,8;UBERON:0009201,6.50e-34,8;UBERON:0006553,6.50e-34,8;UBERON:0003074,6.50e-34,8;UBERON:0003060,6.50e-34,8;UBERON:0000080,2.66e-30,9;UBERON:0002120,2.66e-30,9;UBERON:0004875,2.66e-30,9;UBERON:0005721,2.66e-30,9;UBERON:0005754,2.66e-30,9;UBERON:0007297,2.66e-30,9;UBERON:0004876,4.86e-25,11;UBERON:0006947,2.62e-23,3;UBERON:0004054,2.62e-23,3;UBERON:0003887,4.59e-23,12;UBERON:0005904,7.35e-18,4;UBERON:0006555,1.27e-17,16;UBERON:0004819,1.27e-17,16;UBERON:0000058,4.91e-15,19;UBERON:0002046,1.83e-14,5;UBERON:0004117,1.83e-14,5;UBERON:0007689,1.83e-14,5;UBERON:0007123,1.83e-14,5;UBERON:0003091,1.83e-14,5;UBERON:0002113,2.63e-11,26;UBERON:0003918,2.63e-11,26;UBERON:0011143,2.63e-11,26;UBERON:0005095,2.63e-11,26;UBERON:0007687,2.63e-11,26;UBERON:0010532,8.99e-11,7;UBERON:0000074,8.99e-11,7;UBERON:0001229,8.99e-11,7;UBERON:0001230,8.99e-11,7;UBERON:0003220,8.99e-11,7;UBERON:0005749,8.99e-11,7;UBERON:0004199,8.99e-11,7;UBERON:0004209,8.99e-11,7;UBERON:0004198,8.99e-11,7;UBERON:0003064,1.40e-10,28;UBERON:0000489,1.15e-09,31;UBERON:0003135,2.32e-07,11;UBERON:0009722,2.63e-07,11;UBERON:0007690,2.63e-07,11;UBERON:0001225,7.92e-07,12;UBERON:0008987,7.92e-07,12;UBERON:0006554,9.72e-07,47 | |||
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|short_description=p8@LCN12 | |short_description=p8@LCN12 | ||
}} | }} |
Latest revision as of 14:25, 16 September 2015
Short description: | p8@LCN12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LCN12_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | 0bp_to_ENST00000491316, ENST00000492820_5end |
EntrezGene: | LCN12 |
HGNC: | 28733 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 1.60e-14 | 5 |
glomerular cell | 8.99e-11 | 7 |
kidney corpuscule cell | 8.99e-11 | 7 |
kidney cortical cell | 7.92e-07 | 12 |
renal cortical epithelial cell | 7.92e-07 | 12 |