FFCP PHASE1:Hg19::chr17:58677539..58677610,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8493 | |EntrezGene=8493 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9277 | |HGNC=9277 | ||
|TSSclassifier=strong | |||
|UniProt=O15297,B4DSJ4,Q6P991 | |UniProt=O15297,B4DSJ4,Q6P991 | ||
|association_with_transcript=0bp_to_ENST00000305921,ENST00000544712,NM_003620,uc002iyt.1,uc010ddm.1_5end | |association_with_transcript=0bp_to_ENST00000305921,ENST00000544712,NM_003620,uc002iyt.1,uc010ddm.1_5end | ||
|cluster_id=chr17:58677539..58677610,+ | |||
|coexpression_cluster_id=C194 | |coexpression_cluster_id=C194 | ||
|description=CAGE_peak_1_at_PPM1D_5end | |description=CAGE_peak_1_at_PPM1D_5end | ||
|id=chr17:58677539..58677610,+ | |id=chr17:58677539..58677610,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.91e-45!140;CL:0000037!1.25e-41!172;CL:0000566!1.25e-41!172;CL:0002031!3.05e-38!124;CL:0002032!5.15e-38!165;CL:0000837!5.15e-38!165;CL:0000988!1.72e-37!182;CL:0002087!2.08e-37!119;CL:0000766!1.50e-28!76;CL:0000557!1.51e-25!71;CL:0002009!2.55e-25!65;CL:0000839!6.40e-25!70;CL:0000763!6.93e-25!112;CL:0000049!6.93e-25!112;CL:0002194!4.20e-24!63;CL:0000576!4.20e-24!63;CL:0000040!4.20e-24!63;CL:0000559!4.20e-24!63;CL:0002057!1.64e-23!42;CL:0000860!5.67e-23!45;CL:0000838!6.01e-12!52;CL:0000542!8.63e-12!53;CL:0000051!8.63e-12!53;CL:0000134!3.75e-08!358;CL:0000219!9.79e-08!390;CL:0000084!1.69e-07!25;CL:0000827!1.69e-07!25;CL:0002320!2.11e-07!365;CL:0000791!2.63e-07!18;CL:0000789!2.63e-07!18;CL:0002420!2.63e-07!18;CL:0002419!2.63e-07!18;CL:0000790!2.63e-07!18 | |ontology_enrichment_celltype=CL:0000738!1.91e-45!140;CL:0000037!1.25e-41!172;CL:0000566!1.25e-41!172;CL:0002031!3.05e-38!124;CL:0002032!5.15e-38!165;CL:0000837!5.15e-38!165;CL:0000988!1.72e-37!182;CL:0002087!2.08e-37!119;CL:0000766!1.50e-28!76;CL:0000557!1.51e-25!71;CL:0002009!2.55e-25!65;CL:0000839!6.40e-25!70;CL:0000763!6.93e-25!112;CL:0000049!6.93e-25!112;CL:0002194!4.20e-24!63;CL:0000576!4.20e-24!63;CL:0000040!4.20e-24!63;CL:0000559!4.20e-24!63;CL:0002057!1.64e-23!42;CL:0000860!5.67e-23!45;CL:0000838!6.01e-12!52;CL:0000542!8.63e-12!53;CL:0000051!8.63e-12!53;CL:0000134!3.75e-08!358;CL:0000219!9.79e-08!390;CL:0000084!1.69e-07!25;CL:0000827!1.69e-07!25;CL:0002320!2.11e-07!365;CL:0000791!2.63e-07!18;CL:0000789!2.63e-07!18;CL:0002420!2.63e-07!18;CL:0002419!2.63e-07!18;CL:0000790!2.63e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.20e-18;33!CL:0002057;2.20e-18;33!CL:0000473;2.94e-16;39!CL:0000234;2.94e-16;39!CL:0000576;6.91e-16;48!CL:0000766;1.04e-12;69!CL:0002087;3.33e-11;104!CL:0000738;3.82e-10;136!CL:0000763;1.42e-07;100!CL:0000542;1.90e-07;53!CL:0000791;2.93e-07;18!CL:0000789;2.93e-07;18!CL:0002419;2.93e-07;18!CL:0000084;3.01e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.35e-46,136;CL:0000037,3.09e-42,168;CL:0002031,3.96e-39,120;CL:0000988,1.19e-38,177;CL:0002032,1.34e-38,161;CL:0000837,1.34e-38,161;CL:0002087,2.48e-38,115;CL:0000766,9.60e-30,72;CL:0000557,1.08e-26,67;CL:0002009,1.37e-26,61;CL:0000839,4.72e-26,66;CL:0000763,1.65e-25,108;CL:0000049,1.65e-25,108;CL:0002194,2.37e-25,59;CL:0000576,2.37e-25,59;CL:0000040,2.37e-25,59;CL:0000559,2.37e-25,59;CL:0000473,1.54e-24,48;CL:0000234,1.54e-24,48;CL:0000860,1.64e-23,42;CL:0002057,1.64e-23,42;CL:0000838,6.01e-12,52;CL:0000542,8.63e-12,53;CL:0000051,8.63e-12,53;CL:0000134,3.81e-08,354;CL:0000219,1.02e-07,386;CL:0000084,1.69e-07,25;CL:0000827,1.69e-07,25;CL:0002320,2.15e-07,361;CL:0000791,2.63e-07,18;CL:0000789,2.63e-07,18;CL:0002420,2.63e-07,18;CL:0002419,2.63e-07,18;CL:0000790,2.63e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;2.95e-17;42!CL:0000049;8.30e-08;108!CL:0000051;1.90e-07;53!CL:0000790;2.93e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.10e-28!102;UBERON:0003061!2.10e-28!102;UBERON:0002193!8.70e-25!112;UBERON:0002371!1.98e-21!80;UBERON:0001474!1.53e-20!86;UBERON:0002405!4.29e-16!115;UBERON:0007023!1.37e-14!115;UBERON:0004765!1.99e-13!101;UBERON:0001434!1.99e-13!101;UBERON:0002384!4.09e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!2.10e-28!102;UBERON:0003061!2.10e-28!102;UBERON:0002193!8.70e-25!112;UBERON:0002371!1.98e-21!80;UBERON:0001474!1.53e-20!86;UBERON:0002405!4.29e-16!115;UBERON:0007023!1.37e-14!115;UBERON:0004765!1.99e-13!101;UBERON:0001434!1.99e-13!101;UBERON:0002384!4.09e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.17e-29,98;UBERON:0003061,3.17e-29,98;UBERON:0002193,2.08e-25,108;UBERON:0002371,3.07e-22,76;UBERON:0001474,3.02e-21,82;UBERON:0002405,4.87e-21,93;UBERON:0004765,5.31e-17,90;UBERON:0007023,1.68e-14,114;UBERON:0001434,1.92e-13,100;UBERON:0002384,4.21e-07,371 | |||
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| ||
|short_description=p1@PPM1D | |short_description=p1@PPM1D | ||
}} | }} |
Latest revision as of 14:40, 16 September 2015
Short description: | p1@PPM1D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PPM1D_5end |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | 0bp_to_ENST00000305921, ENST00000544712, NM_003620, uc002iyt.1, uc010ddm.1_5end |
EntrezGene: | PPM1D |
HGNC: | 9277 |
UniProt: | O15297B4DSJ4Q6P991 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.17e-29 | 98 |
blood island | 3.17e-29 | 98 |
hemolymphoid system | 2.08e-25 | 108 |
bone marrow | 3.07e-22 | 76 |
bone element | 3.02e-21 | 82 |
immune system | 4.87e-21 | 93 |
skeletal element | 5.31e-17 | 90 |
adult organism | 1.68e-14 | 114 |
skeletal system | 1.92e-13 | 100 |
connective tissue | 4.21e-07 | 371 |