FFCP PHASE1:Hg19::chr2:27002705..27002711,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54978 | |EntrezGene=54978 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=26055 | |HGNC=26055 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-59bp_to_BC016389_5end | |association_with_transcript=-59bp_to_BC016389_5end | ||
|cluster_id=chr2:27002705..27002711,+ | |||
|description=CAGE_peak_2_at_C2orf18_5end | |description=CAGE_peak_2_at_C2orf18_5end | ||
|id=chr2:27002705..27002711,+ | |id=chr2:27002705..27002711,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.96e-22!254;CL:0000220!1.38e-17!246;CL:0002321!1.13e-16!248;CL:0000222!3.64e-09!119;CL:0000223!2.14e-08!59;CL:0000213!1.39e-07!57;CL:0000215!1.39e-07!57 | |ontology_enrichment_celltype=CL:0000066!2.96e-22!254;CL:0000220!1.38e-17!246;CL:0002321!1.13e-16!248;CL:0000222!3.64e-09!119;CL:0000223!2.14e-08!59;CL:0000213!1.39e-07!57;CL:0000215!1.39e-07!57 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.74e-22,253;CL:0002321,1.80e-17,250;CL:0000222,6.94e-10,121;CL:0000223,4.93e-08,58;CL:0000213,5.64e-08,58;CL:0000215,5.64e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!5.29e-13!659;UBERON:0000480!6.70e-13!626;UBERON:0000467!8.79e-13!625;UBERON:0002050!1.39e-12!605;UBERON:0005423!1.39e-12!605;UBERON:0000923!2.20e-12!604;UBERON:0005291!2.20e-12!604;UBERON:0006598!2.20e-12!604;UBERON:0002532!2.20e-12!604;UBERON:0000922!1.08e-11!612;UBERON:0002100!8.13e-11!216;UBERON:0000062!1.00e-09!511;UBERON:0000926!2.85e-09!448;UBERON:0004120!2.85e-09!448;UBERON:0006603!2.85e-09!448;UBERON:0009569!7.41e-09!113;UBERON:0000481!7.68e-09!347;UBERON:0004119!4.39e-08!169;UBERON:0000925!4.39e-08!169;UBERON:0006595!4.39e-08!169;UBERON:0005256!4.55e-08!143;UBERON:0000119!8.00e-08!312;UBERON:0000483!1.13e-07!309;UBERON:0000475!1.41e-07!365;UBERON:0000490!2.77e-07!138;UBERON:0003104!2.85e-07!238;UBERON:0009142!2.85e-07!238;UBERON:0003064!8.89e-07!37 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,4.24e-11,199;UBERON:0005423,2.14e-09,581;UBERON:0000922,1.47e-08,592;UBERON:0009569,1.52e-08,112;UBERON:0003104,4.29e-08,160;UBERON:0009142,4.29e-08,160;UBERON:0000119,5.49e-08,309;UBERON:0002050,5.74e-08,564;UBERON:0000923,6.59e-08,560;UBERON:0010316,6.59e-08,560;UBERON:0005291,6.59e-08,560;UBERON:0006598,6.59e-08,560;UBERON:0010317,6.59e-08,560;UBERON:0002532,6.59e-08,560;UBERON:0000483,7.75e-08,306;UBERON:0004119,1.18e-07,160;UBERON:0000925,1.18e-07,160;UBERON:0006595,1.18e-07,160;UBERON:0005256,3.41e-07,122;UBERON:0000490,6.40e-07,148 | |||
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| ||
|short_description=p2@C2orf18 | |short_description=p2@C2orf18 | ||
}} | }} |
Latest revision as of 15:23, 16 September 2015
Short description: | p2@C2orf18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C2orf18_5end |
Coexpression cluster: | NA |
Association with transcript: | -59bp_to_BC016389_5end |
EntrezGene: | C2orf18 |
HGNC: | 26055 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.74e-22 | 253 |
embryonic cell | 1.80e-17 | 250 |
mesodermal cell | 6.94e-10 | 121 |
endodermal cell | 4.93e-08 | 58 |
lining cell | 5.64e-08 | 58 |
barrier cell | 5.64e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
trunk | 4.24e-11 | 199 |
developing anatomical structure | 2.14e-09 | 581 |
embryo | 1.47e-08 | 592 |
subdivision of trunk | 1.52e-08 | 112 |
mesenchyme | 4.29e-08 | 160 |
entire embryonic mesenchyme | 4.29e-08 | 160 |
cell layer | 5.49e-08 | 309 |
embryonic structure | 5.74e-08 | 564 |
germ layer | 6.59e-08 | 560 |
germ layer / neural crest | 6.59e-08 | 560 |
embryonic tissue | 6.59e-08 | 560 |
presumptive structure | 6.59e-08 | 560 |
germ layer / neural crest derived structure | 6.59e-08 | 560 |
epiblast (generic) | 6.59e-08 | 560 |
epithelium | 7.75e-08 | 306 |
endoderm-derived structure | 1.18e-07 | 160 |
endoderm | 1.18e-07 | 160 |
presumptive endoderm | 1.18e-07 | 160 |
trunk mesenchyme | 3.41e-07 | 122 |
unilaminar epithelium | 6.40e-07 | 148 |