FFCP PHASE1:Hg19::chr1:1361494..1361497,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=643965 | |EntrezGene=643965 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37099 | |HGNC=37099 | ||
|TSSclassifier=strong | |||
|UniProt=A6NKF7 | |UniProt=A6NKF7 | ||
|association_with_transcript=-10bp_to_NM_001146685,uc010nyp.1_5end | |association_with_transcript=-10bp_to_NM_001146685,uc010nyp.1_5end | ||
|cluster_id=chr1:1361494..1361497,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_7_at_TMEM88B_5end | |description=CAGE_peak_7_at_TMEM88B_5end | ||
|id=chr1:1361494..1361497,+ | |id=chr1:1361494..1361497,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.78e-15;7!CL:0000586;1.78e-15;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.65e-15,7;CL:0000586,1.65e-15,7 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.55e-98;1!UBERON:0003056;5.04e-34;3!UBERON:0009117;2.87e-11;10!UBERON:0005564;2.87e-11;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p7@TMEM88B | |short_description=p7@TMEM88B | ||
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Latest revision as of 15:29, 16 September 2015
Short description: | p7@TMEM88B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TMEM88B_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -10bp_to_NM_001146685, uc010nyp.1_5end |
EntrezGene: | TMEM88B |
HGNC: | 37099 |
UniProt: | A6NKF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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germ line cell | 1.65e-15 | 7 |
germ cell | 1.65e-15 | 7 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.55e-98 | 1 |
cranial nerve | 2.55e-98 | 1 |
nerve trunk | 2.55e-98 | 1 |
nerve connecting eye with brain | 2.55e-98 | 1 |
nerve | 2.55e-98 | 1 |
retinal neural layer | 2.55e-98 | 1 |
presumptive neural retina | 2.55e-98 | 1 |
neural tissue | 4.52e-50 | 2 |
multi cell component structure | 4.52e-50 | 2 |
neuron projection bundle | 4.52e-50 | 2 |
layer of retina | 7.14e-26 | 4 |
retina | 9.07e-18 | 6 |
photoreceptor array | 9.07e-18 | 6 |
posterior segment of eyeball | 9.07e-18 | 6 |
testis | 9.39e-14 | 8 |
peripheral nervous system | 2.45e-12 | 8 |
male reproductive organ | 2.16e-10 | 11 |
segmental subdivision of nervous system | 5.70e-09 | 13 |