FFCP PHASE1:Hg19::chr9:140335789..140335818,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:140335789..140335818,- to FFCP PHASE1:Hg19::chr9:140335789..140335818,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=377841 | |EntrezGene=377841 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24860 | |HGNC=24860 | ||
|TSSclassifier=strong | |||
|UniProt=Q5MY95 | |UniProt=Q5MY95 | ||
|association_with_transcript=82bp_to_ENST00000344119,ENST00000371506,NM_001033113,NM_198585,uc004cmw.2,uc004cmx.2,uc004cmy.2_5end | |||
|cluster_id=chr9:140335789..140335818,- | |||
|coexpression_cluster_id=C127 | |||
|description=CAGE_peak_1_at_ENTPD8_5end | |||
|id=chr9:140335789..140335818,- | |||
|ontology_enrichment_celltype=CL:0002178!6.21e-08!3;CL:0002541!1.07e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002563;9.48e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,9.21e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009497;4.97e-07;13!UBERON:0001045;8.42e-07;1!UBERON:0006242;8.42e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.68e-17!106;DOID:3119!5.92e-16!14;DOID:0050687!2.22e-13!143;DOID:299!2.38e-11!25;DOID:5093!5.33e-10!4;DOID:1612!5.33e-10!4;DOID:162!1.29e-09!235;DOID:14566!3.48e-09!239;DOID:0050686!3.24e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.32e-12;2!DOID:3119;2.39e-10;14!DOID:299;8.24e-08;25!DOID:1325;1.12e-07;7!DOID:3904;1.12e-07;7!DOID:0050619;1.46e-07;1!DOID:1357;1.46e-07;1!DOID:5093;6.70e-07;4!DOID:1612;6.70e-07;4!DOID:3111;8.42e-07;1!DOID:3603;8.42e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.36e-12,2;DOID:3119,2.62e-10,14;DOID:299,8.19e-08,25;DOID:1325,1.35e-07,7;DOID:3904,1.35e-07,7;DOID:0050619,1.46e-07,1;DOID:1357,1.46e-07,1;DOID:5093,6.70e-07,4;DOID:1612,6.70e-07,4;DOID:3111,8.18e-07,1;DOID:3603,8.18e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005409!4.98e-18!35;UBERON:0004921!2.40e-15!129;UBERON:0004185!2.40e-15!129;UBERON:0001007!7.34e-14!155;UBERON:0001555!7.34e-14!155;UBERON:0007026!7.34e-14!155;UBERON:0004119!1.17e-12!169;UBERON:0000925!1.17e-12!169;UBERON:0006595!1.17e-12!169;UBERON:0000160!1.33e-12!27;UBERON:0000059!8.55e-11!11;UBERON:0000077!7.26e-10!130;UBERON:0004907!2.50e-08!5;UBERON:0000476!1.07e-07!3;UBERON:0000920!1.07e-07!3;UBERON:0009856!1.53e-07!26;UBERON:0001041!1.92e-07!98;UBERON:0005911!2.06e-07!82;UBERON:0001155!2.99e-07!9;UBERON:0000945!3.52e-07!8;UBERON:0010039!3.52e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;8.69e-31;17!UBERON:0005409;7.20e-29;22!UBERON:0000059;1.63e-18;11!UBERON:0004921;6.13e-17;33!UBERON:0001155;3.45e-16;9!UBERON:0002108;2.11e-11;4!UBERON:0004907;1.32e-10;5!UBERON:0001007;3.20e-08;81!UBERON:0002423;1.16e-07;25!UBERON:0001764;1.46e-07;1!UBERON:0001825;1.46e-07;1!UBERON:0001154;8.42e-07;1!UBERON:0001153;8.42e-07;1!UBERON:0009854;8.42e-07;1!UBERON:0001242;9.48e-07;4!UBERON:0001262;9.48e-07;4!UBERON:0004786;9.48e-07;4!UBERON:0004808;9.48e-07;4!UBERON:0001277;9.48e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.69e-31,17;UBERON:0005409,2.70e-25,25;UBERON:0000059,1.65e-18,11;UBERON:0001155,3.04e-16,9;UBERON:0004921,4.40e-15,118;UBERON:0001007,6.85e-13,145;UBERON:0001555,6.85e-13,145;UBERON:0007026,6.85e-13,145;UBERON:0002108,2.11e-11,4;UBERON:0004119,2.80e-11,160;UBERON:0000925,2.80e-11,160;UBERON:0006595,2.80e-11,160;UBERON:0004907,1.34e-10,5;UBERON:0009856,7.52e-10,26;UBERON:0009854,1.96e-08,23;UBERON:0009497,1.06e-07,25;UBERON:0000015,1.06e-07,25;UBERON:0002423,1.06e-07,25;UBERON:0006235,1.06e-07,25;UBERON:0004161,1.06e-07,25;UBERON:0007499,1.11e-07,25;UBERON:0011216,1.27e-07,223;UBERON:0005911,1.31e-07,82;UBERON:0001764,1.46e-07,1;UBERON:0001825,1.46e-07,1;UBERON:0003929,4.10e-07,54;UBERON:0001154,6.88e-07,1;UBERON:0001153,6.88e-07,1;UBERON:0001045,6.88e-07,1;UBERON:0001242,9.21e-07,4;UBERON:0001262,9.21e-07,4;UBERON:0004786,9.21e-07,4;UBERON:0004808,9.21e-07,4;UBERON:0001277,9.21e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,12.6755034821831,0,4.72631925345123,0,6.3953988042419,0,0,0,0,0,0,0,0,0,0,0,0,0,6.3216351836742,12.8772924314231,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53804844142407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.94596855909067,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.55448424582997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13654458722565,0.23874448473769,0,0,0,0,0,0,0,0,1.65770349318689,1.51159648712566,0,0.123084805461069,0,0,1.9692329214317,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.69169171316418,0,0.325942115766024,0.638002319463839,0.0915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,0,0,3.67517985728246,0,9.95261931078505,14.595498143051,15.8867837682743,0.296521128680622,0.123563938946503,0,0,0,0,0.364909578431332,0.19566461893209,0,0,4.83962864194656,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.195984794828755,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,1.28071796843612,0.39961921916426,0.144090417154106,0.458146384663663,0.343189995723929,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,2.78449243988357,2.65013777824443,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,70.5172892163552,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26787274015176,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.550285795565037,0,0,0,0,0,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,1.13831095675649,0.0887023701626388,0,0,0,0,0.118193840883968,0,0,0,1.12108865325516,0.913158720509496,0,0,0.428859265059938,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,16.8818401818218,1.21917924982269,0,0,0,0,2.57333409808316,7.16222790580926,0,1.1294608203896,0,2.2644426535001,34.3425003580354,5.02686989159102,18.3423745580994,0,0.942706188406504,0,0,0,0,0,0.128915775947154,0,0.178553938605658,0,0.160482733378337,0,0,0,0,0,0,7.93540260773101,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,12.6755034821831,0,4.72631925345123,0,6.3953988042419,0,0,0,0,0,0,0,0,0,0,0,0,0,6.3216351836742,12.8772924314231,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53804844142407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.94596855909067,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.55448424582997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13654458722565,0.23874448473769,0,0,0,0,0,0,0,0,1.65770349318689,1.51159648712566,0,0.123084805461069,0,0,1.9692329214317,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.69169171316418,0,0.325942115766024,0.638002319463839,0.0915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,0,0,3.67517985728246,0,9.95261931078505,14.595498143051,15.8867837682743,0.296521128680622,0.123563938946503,0,0,0,0,0.364909578431332,0.19566461893209,0,0,4.83962864194656,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.195984794828755,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,1.28071796843612,0.39961921916426,0.144090417154106,0.458146384663663,0.343189995723929,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,2.78449243988357,2.65013777824443,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,70.5172892163552,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26787274015176,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.550285795565037,0,0,0,0,0,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,1.13831095675649,0.0887023701626388,0,0,0,0,0.118193840883968,0,0,0,1.12108865325516,0.913158720509496,0,0,0.428859265059938,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,16.8818401818218,1.21917924982269,0,0,0,0,2.57333409808316,7.16222790580926,0,1.1294608203896,0,2.2644426535001,34.3425003580354,5.02686989159102,18.3423745580994,0,0.942706188406504,0,0,0,0,0,0.128915775947154,0,0.178553938605658,0,0.160482733378337,0,0,0,0,0,0,7.93540260773101,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p1@ENTPD8 | |||
}} | }} |
Latest revision as of 17:09, 16 September 2015
Short description: | p1@ENTPD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENTPD8_5end |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | 82bp_to_ENST00000344119, ENST00000371506, NM_001033113, NM_198585, uc004cmw.2, uc004cmx.2, uc004cmy.2_5end |
EntrezGene: | ENTPD8 |
HGNC: | 24860 |
UniProt: | Q5MY95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 9.21e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.69e-31 | 17 |
gastrointestinal system | 2.70e-25 | 25 |
large intestine | 1.65e-18 | 11 |
colon | 3.04e-16 | 9 |
subdivision of digestive tract | 4.40e-15 | 118 |
digestive system | 6.85e-13 | 145 |
digestive tract | 6.85e-13 | 145 |
primitive gut | 6.85e-13 | 145 |
small intestine | 2.11e-11 | 4 |
endoderm-derived structure | 2.80e-11 | 160 |
endoderm | 2.80e-11 | 160 |
presumptive endoderm | 2.80e-11 | 160 |
lower digestive tract | 1.34e-10 | 5 |
sac | 7.52e-10 | 26 |
digestive tract diverticulum | 1.96e-08 | 23 |
epithelium of foregut-midgut junction | 1.06e-07 | 25 |
anatomical boundary | 1.06e-07 | 25 |
hepatobiliary system | 1.06e-07 | 25 |
foregut-midgut junction | 1.06e-07 | 25 |
septum transversum | 1.06e-07 | 25 |
epithelial sac | 1.11e-07 | 25 |
organ system subdivision | 1.27e-07 | 223 |
endo-epithelium | 1.31e-07 | 82 |
maxillary sinus | 1.46e-07 | 1 |
paranasal sinus | 1.46e-07 | 1 |
gut epithelium | 4.10e-07 | 54 |
vermiform appendix | 6.88e-07 | 1 |
caecum | 6.88e-07 | 1 |
midgut | 6.88e-07 | 1 |
intestinal mucosa | 9.21e-07 | 4 |
wall of intestine | 9.21e-07 | 4 |
gastrointestinal system mucosa | 9.21e-07 | 4 |
gastrointestinal system epithelium | 9.21e-07 | 4 |
intestinal epithelium | 9.21e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.36e-12 | 2 |
gastrointestinal system cancer | 2.62e-10 | 14 |
adenocarcinoma | 8.19e-08 | 25 |
bronchus cancer | 1.35e-07 | 7 |
bronchogenic carcinoma | 1.35e-07 | 7 |
paranasal sinus cancer | 1.46e-07 | 1 |
maxillary sinus cancer | 1.46e-07 | 1 |
thoracic cancer | 6.70e-07 | 4 |
breast cancer | 6.70e-07 | 4 |
cystadenocarcinoma | 8.18e-07 | 1 |
mucinous cystadenocarcinoma | 8.18e-07 | 1 |