FFCP PHASE1:Hg19::chr7:140179276..140179340,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23608 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7112 | |||
|TSSclassifier=strong | |||
|UniProt=C9J7K5 | |||
|association_with_transcript=0bp_to_ENST00000443720,ENST00000481705_5end | |||
|cluster_id=chr7:140179276..140179340,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_MKRN1_5end | |||
|id=chr7:140179276..140179340,- | |||
|ontology_enrichment_celltype=CL:0000738!2.45e-09!140;CL:0000037!6.02e-09!172;CL:0000566!6.02e-09!172;CL:0000791!1.42e-08!18;CL:0000789!1.42e-08!18;CL:0002420!1.42e-08!18;CL:0002419!1.42e-08!18;CL:0000790!1.42e-08!18;CL:0002032!1.73e-07!165;CL:0000837!1.73e-07!165;CL:0000988!2.04e-07!182;CL:0002087!8.33e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.67e-08;18!CL:0000789;1.67e-08;18!CL:0002419;1.67e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.29e-11,136;CL:0000037,3.14e-10,168;CL:0002032,1.17e-08,161;CL:0000837,1.17e-08,161;CL:0000791,1.42e-08,18;CL:0000789,1.42e-08,18;CL:0002420,1.42e-08,18;CL:0002419,1.42e-08,18;CL:0000790,1.42e-08,18;CL:0000988,1.73e-08,177;CL:0002087,4.08e-08,115;CL:0002031,9.47e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000790;1.67e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.69e-19!115;UBERON:0001017!2.04e-10!82;UBERON:0001049!5.28e-10!57;UBERON:0005068!5.28e-10!57;UBERON:0006241!5.28e-10!57;UBERON:0007135!5.28e-10!57;UBERON:0005743!6.03e-10!86;UBERON:0002616!8.69e-10!59;UBERON:0002780!1.17e-08!41;UBERON:0001890!1.17e-08!41;UBERON:0006240!1.17e-08!41;UBERON:0002619!1.58e-08!22;UBERON:0001869!2.15e-08!32;UBERON:0003080!2.81e-08!42;UBERON:0002020!5.91e-08!34;UBERON:0003528!5.91e-08!34;UBERON:0000955!7.38e-08!69;UBERON:0006238!7.38e-08!69;UBERON:0001950!9.15e-08!20;UBERON:0001893!1.43e-07!34;UBERON:0000073!1.99e-07!94;UBERON:0001016!1.99e-07!94;UBERON:0002791!2.82e-07!33;UBERON:0003075!4.95e-07!86;UBERON:0007284!4.95e-07!86;UBERON:0002346!5.76e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.67e-08;22!UBERON:0001950;9.88e-08;20!UBERON:0001869;1.39e-07;32!UBERON:0003528;4.64e-07;34!UBERON:0002020;4.64e-07;34!UBERON:0002791;4.67e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.23e-18,114;UBERON:0001017,1.05e-10,81;UBERON:0001049,2.31e-10,56;UBERON:0005068,2.31e-10,56;UBERON:0006241,2.31e-10,56;UBERON:0007135,2.31e-10,56;UBERON:0000073,2.91e-10,53;UBERON:0002616,2.91e-10,53;UBERON:0002780,1.17e-08,41;UBERON:0001890,1.17e-08,41;UBERON:0003080,1.17e-08,41;UBERON:0006240,1.17e-08,41;UBERON:0002619,1.58e-08,22;UBERON:0001869,2.15e-08,32;UBERON:0000955,4.08e-08,68;UBERON:0006238,4.08e-08,68;UBERON:0001016,5.87e-08,89;UBERON:0003528,5.91e-08,34;UBERON:0002020,5.91e-08,34;UBERON:0001950,9.15e-08,20;UBERON:0002791,9.19e-08,32;UBERON:0001893,1.43e-07,34 | |||
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| |||
|short_description=p1@MKRN1 | |||
}} |
Latest revision as of 17:52, 16 September 2015
Short description: | p1@MKRN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MKRN1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000443720, ENST00000481705_5end |
EntrezGene: | MKRN1 |
HGNC: | 7112 |
UniProt: | C9J7K5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.29e-11 | 136 |
hematopoietic stem cell | 3.14e-10 | 168 |
hematopoietic oligopotent progenitor cell | 1.17e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.17e-08 | 161 |
mature alpha-beta T cell | 1.42e-08 | 18 |
alpha-beta T cell | 1.42e-08 | 18 |
immature T cell | 1.42e-08 | 18 |
mature T cell | 1.42e-08 | 18 |
immature alpha-beta T cell | 1.42e-08 | 18 |
hematopoietic cell | 1.73e-08 | 177 |
nongranular leukocyte | 4.08e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 9.47e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.23e-18 | 114 |
central nervous system | 1.05e-10 | 81 |
neural tube | 2.31e-10 | 56 |
neural rod | 2.31e-10 | 56 |
future spinal cord | 2.31e-10 | 56 |
neural keel | 2.31e-10 | 56 |
regional part of nervous system | 2.91e-10 | 53 |
regional part of brain | 2.91e-10 | 53 |
regional part of forebrain | 1.17e-08 | 41 |
forebrain | 1.17e-08 | 41 |
anterior neural tube | 1.17e-08 | 41 |
future forebrain | 1.17e-08 | 41 |
regional part of cerebral cortex | 1.58e-08 | 22 |
cerebral hemisphere | 2.15e-08 | 32 |
brain | 4.08e-08 | 68 |
future brain | 4.08e-08 | 68 |
nervous system | 5.87e-08 | 89 |
brain grey matter | 5.91e-08 | 34 |
gray matter | 5.91e-08 | 34 |
neocortex | 9.15e-08 | 20 |
regional part of telencephalon | 9.19e-08 | 32 |
telencephalon | 1.43e-07 | 34 |