FFCP PHASE1:Hg19::chr1:241695193..241695208,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8564 | |EntrezGene=8564 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6381 | |HGNC=6381 | ||
|TSSclassifier=strong | |||
|UniProt=O15229 | |UniProt=O15229 | ||
|association_with_transcript=-225bp_to_ENST00000366558,ENST00000366559,NM_003679_5end | |||
|cluster_id=chr1:241695193..241695208,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_KMO_5end | |||
|id=chr1:241695193..241695208,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.53e-89!65;CL:0002194!6.24e-86!63;CL:0000576!6.24e-86!63;CL:0000040!6.24e-86!63;CL:0000559!6.24e-86!63;CL:0000557!1.49e-80!71;CL:0002057!2.80e-80!42;CL:0000766!4.39e-77!76;CL:0000839!1.06e-75!70;CL:0000860!5.77e-74!45;CL:0000738!1.95e-62!140;CL:0000763!1.50e-60!112;CL:0000049!1.50e-60!112;CL:0002087!4.05e-57!119;CL:0000037!1.33e-51!172;CL:0000566!1.33e-51!172;CL:0002031!2.92e-50!124;CL:0000988!1.40e-47!182;CL:0002032!3.28e-46!165;CL:0000837!3.28e-46!165;CL:0002393!4.64e-17!9;CL:0002397!4.64e-17!9;CL:0000451!8.59e-16!10;CL:0000134!3.42e-15!358;CL:0002320!1.66e-14!365;CL:0000219!2.74e-13!390;CL:0000990!1.13e-12!8;CL:0000840!1.10e-11!5;CL:0001029!1.10e-11!5;CL:0000048!2.67e-09!430;CL:0000723!6.60e-09!436;CL:0000034!2.11e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.16e-100;33!CL:0002057;2.16e-100;33!CL:0000473;6.93e-83;39!CL:0000234;6.93e-83;39!CL:0000576;4.28e-66;48!CL:0000766;1.03e-46;69!CL:0000763;4.49e-18;100!CL:0002087;2.09e-16;104!CL:0002393;1.14e-15;6!CL:0002397;1.14e-15;6!CL:0000738;8.85e-15;136!CL:0000767;2.17e-11;3!CL:0000840;4.88e-10;5!CL:0000988;2.03e-09;177!CL:0000451;3.81e-08;10!CL:0000219;6.79e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.68e-128,48;CL:0000234,2.68e-128,48;CL:0000860,7.59e-127,42;CL:0002057,7.59e-127,42;CL:0002009,5.64e-118,61;CL:0002194,1.23e-116,59;CL:0000576,1.23e-116,59;CL:0000040,1.23e-116,59;CL:0000559,1.23e-116,59;CL:0000766,7.33e-108,72;CL:0000557,1.03e-106,67;CL:0000839,1.89e-103,66;CL:0000763,2.96e-72,108;CL:0000049,2.96e-72,108;CL:0000738,1.61e-63,136;CL:0002087,2.21e-61,115;CL:0002031,1.05e-55,120;CL:0000037,1.42e-49,168;CL:0000988,1.48e-46,177;CL:0002032,2.41e-45,161;CL:0000837,2.41e-45,161;CL:0002393,1.90e-19,9;CL:0002397,1.90e-19,9;CL:0000134,3.39e-18,354;CL:0002320,1.22e-17,361;CL:0000219,1.09e-15,386;CL:0000048,2.69e-13,427;CL:0000723,5.75e-13,433;CL:0000034,1.54e-12,441;CL:0000767,2.67e-11,3;CL:0000840,4.43e-10,5;CL:0001029,4.43e-10,5;CL:0000451,3.23e-08,10;CL:0000990,9.69e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.92e-91;42!CL:0000049;3.11e-20;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.42e-69!80;UBERON:0001474!1.59e-63!86;UBERON:0002390!2.43e-61!102;UBERON:0003061!2.43e-61!102;UBERON:0002193!3.14e-56!112;UBERON:0004765!1.55e-51!101;UBERON:0001434!1.55e-51!101;UBERON:0002405!4.53e-50!115;UBERON:0002204!1.66e-25!167;UBERON:0003081!3.79e-22!216;UBERON:0002384!3.31e-14!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.16e-93,76;UBERON:0001474,1.13e-85,82;UBERON:0004765,2.74e-77,90;UBERON:0002390,3.88e-77,98;UBERON:0003061,3.88e-77,98;UBERON:0002405,1.64e-74,93;UBERON:0002193,3.74e-69,108;UBERON:0001434,1.14e-68,100;UBERON:0002204,2.28e-37,167;UBERON:0003081,2.67e-32,203;UBERON:0000926,2.90e-17,315;UBERON:0004120,2.90e-17,315;UBERON:0006603,2.90e-17,315;UBERON:0002384,6.93e-17,371 | |||
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| ||
|short_description=p3@KMO | |||
}} | }} |
Latest revision as of 17:55, 16 September 2015
Short description: | p3@KMO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KMO_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -225bp_to_ENST00000366558, ENST00000366559, NM_003679_5end |
EntrezGene: | KMO |
HGNC: | 6381 |
UniProt: | O15229 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.16e-93 | 76 |
bone element | 1.13e-85 | 82 |
skeletal element | 2.74e-77 | 90 |
hematopoietic system | 3.88e-77 | 98 |
blood island | 3.88e-77 | 98 |
immune system | 1.64e-74 | 93 |
hemolymphoid system | 3.74e-69 | 108 |
skeletal system | 1.14e-68 | 100 |
musculoskeletal system | 2.28e-37 | 167 |
lateral plate mesoderm | 2.67e-32 | 203 |
mesoderm | 2.90e-17 | 315 |
mesoderm-derived structure | 2.90e-17 | 315 |
presumptive mesoderm | 2.90e-17 | 315 |
connective tissue | 6.93e-17 | 371 |