FFCP PHASE1:Hg19::chr14:94847272..94847286,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5265 | |EntrezGene=5265 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8941 | |HGNC=8941 | ||
|TSSclassifier=strong | |||
|UniProt=P01009 | |UniProt=P01009 | ||
|association_with_transcript=-21bp_to_X02920_5end | |association_with_transcript=-21bp_to_X02920_5end | ||
|cluster_id=chr14:94847272..94847286,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_12_at_SERPINA1_5end | |description=CAGE_peak_12_at_SERPINA1_5end | ||
|id=chr14:94847272..94847286,- | |id=chr14:94847272..94847286,- | ||
|ontology_enrichment_celltype=CL:0002057!1.18e-52!42;CL:0000860!4.09e-48!45;CL:0000766!6.11e-47!76;CL:0002194!3.76e-46!63;CL:0000576!3.76e-46!63;CL:0000040!3.76e-46!63;CL:0000559!3.76e-46!63;CL:0002009!3.30e-44!65;CL:0000839!7.73e-40!70;CL:0000557!4.87e-39!71;CL:0000763!4.24e-28!112;CL:0000049!4.24e-28!112;CL:0002087!7.99e-25!119;CL:0000738!8.97e-25!140;CL:0002031!5.82e-20!124;CL:0000037!4.67e-18!172;CL:0000566!4.67e-18!172;CL:0002032!4.39e-17!165;CL:0000837!4.39e-17!165;CL:0000988!5.11e-16!182;CL:0002393!1.22e-12!9;CL:0002397!1.22e-12!9;CL:0000181!2.46e-09!12;CL:0000417!2.46e-09!12;CL:0000668!2.46e-09!12;CL:0000414!2.46e-09!12;CL:0000412!2.46e-09!12;CL:0000182!2.46e-09!12 | |ontology_enrichment_celltype=CL:0002057!1.18e-52!42;CL:0000860!4.09e-48!45;CL:0000766!6.11e-47!76;CL:0002194!3.76e-46!63;CL:0000576!3.76e-46!63;CL:0000040!3.76e-46!63;CL:0000559!3.76e-46!63;CL:0002009!3.30e-44!65;CL:0000839!7.73e-40!70;CL:0000557!4.87e-39!71;CL:0000763!4.24e-28!112;CL:0000049!4.24e-28!112;CL:0002087!7.99e-25!119;CL:0000738!8.97e-25!140;CL:0002031!5.82e-20!124;CL:0000037!4.67e-18!172;CL:0000566!4.67e-18!172;CL:0002032!4.39e-17!165;CL:0000837!4.39e-17!165;CL:0000988!5.11e-16!182;CL:0002393!1.22e-12!9;CL:0002397!1.22e-12!9;CL:0000181!2.46e-09!12;CL:0000417!2.46e-09!12;CL:0000668!2.46e-09!12;CL:0000414!2.46e-09!12;CL:0000412!2.46e-09!12;CL:0000182!2.46e-09!12 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.26e-58;33!CL:0002057;1.26e-58;33!CL:0000473;3.54e-56;39!CL:0000234;3.54e-56;39!CL:0000576;3.25e-45;48!CL:0000766;7.12e-37;69!CL:0000763;9.56e-14;100!CL:0000182;3.94e-11;12!CL:0002393;1.02e-10;6!CL:0002397;1.02e-10;6!CL:0000235;2.30e-10;6!CL:0000738;7.17e-10;136!CL:0002087;9.84e-10;104!CL:0000775;1.60e-09;3!CL:0000875;1.07e-08;3!CL:0002396;1.07e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.81e-90,48;CL:0000234,1.81e-90,48;CL:0000860,2.33e-81,42;CL:0002057,2.33e-81,42;CL:0002194,5.77e-70,59;CL:0000576,5.77e-70,59;CL:0000040,5.77e-70,59;CL:0000559,5.77e-70,59;CL:0000766,4.91e-68,72;CL:0002009,2.55e-67,61;CL:0000839,2.11e-61,66;CL:0000557,2.53e-60,67;CL:0000763,2.41e-41,108;CL:0000049,2.41e-41,108;CL:0002087,3.79e-34,115;CL:0000738,9.92e-34,136;CL:0002031,1.64e-30,120;CL:0002032,3.74e-25,161;CL:0000837,3.74e-25,161;CL:0000037,6.60e-25,168;CL:0000988,5.27e-23,177;CL:0002393,2.72e-17,9;CL:0002397,2.72e-17,9;CL:0000182,4.43e-11,12;CL:0000235,3.44e-10,6;CL:0000134,7.53e-10,354;CL:0000775,1.72e-09,3;CL:0002320,2.09e-09,361;CL:0000875,1.28e-08,3;CL:0002396,1.28e-08,3;CL:0000219,7.39e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.87e-59;42!CL:0000049;3.86e-14;108!UBERON:0004161;8.83e-12;11!UBERON:0009497;8.75e-10;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.13e-38!115;UBERON:0002390!1.46e-36!102;UBERON:0003061!1.46e-36!102;UBERON:0002193!7.03e-33!112;UBERON:0002371!9.29e-33!80;UBERON:0001474!1.35e-30!86;UBERON:0004765!6.47e-26!101;UBERON:0001434!6.47e-26!101;UBERON:0003081!3.77e-12!216;UBERON:0002204!9.05e-11!167;UBERON:0008835!1.63e-10!22;UBERON:0003894!1.63e-10!22;UBERON:0009497!3.21e-10!25;UBERON:0000015!3.21e-10!25;UBERON:0002423!3.21e-10!25;UBERON:0006235!3.21e-10!25;UBERON:0004161!3.21e-10!25;UBERON:0009854!7.02e-10!23;UBERON:0000926!1.31e-09!448;UBERON:0004120!1.31e-09!448;UBERON:0006603!1.31e-09!448;UBERON:0002107!1.57e-09!19;UBERON:0006925!1.57e-09!19;UBERON:0008836!1.57e-09!19;UBERON:0005057!2.71e-09!26;UBERON:0007499!9.04e-09!25;UBERON:0000062!2.72e-08!511;UBERON:0009856!2.78e-08!26;UBERON:0003929!8.14e-07!54 | |ontology_enrichment_uberon=UBERON:0002405!2.13e-38!115;UBERON:0002390!1.46e-36!102;UBERON:0003061!1.46e-36!102;UBERON:0002193!7.03e-33!112;UBERON:0002371!9.29e-33!80;UBERON:0001474!1.35e-30!86;UBERON:0004765!6.47e-26!101;UBERON:0001434!6.47e-26!101;UBERON:0003081!3.77e-12!216;UBERON:0002204!9.05e-11!167;UBERON:0008835!1.63e-10!22;UBERON:0003894!1.63e-10!22;UBERON:0009497!3.21e-10!25;UBERON:0000015!3.21e-10!25;UBERON:0002423!3.21e-10!25;UBERON:0006235!3.21e-10!25;UBERON:0004161!3.21e-10!25;UBERON:0009854!7.02e-10!23;UBERON:0000926!1.31e-09!448;UBERON:0004120!1.31e-09!448;UBERON:0006603!1.31e-09!448;UBERON:0002107!1.57e-09!19;UBERON:0006925!1.57e-09!19;UBERON:0008836!1.57e-09!19;UBERON:0005057!2.71e-09!26;UBERON:0007499!9.04e-09!25;UBERON:0000062!2.72e-08!511;UBERON:0009856!2.78e-08!26;UBERON:0003929!8.14e-07!54 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.93e-11;25!UBERON:0002107;5.35e-11;19!UBERON:0006925;5.35e-11;19!UBERON:0002108;1.98e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.09e-52,76;UBERON:0002390,9.98e-49,98;UBERON:0003061,9.98e-49,98;UBERON:0001474,2.89e-47,82;UBERON:0002193,4.49e-43,108;UBERON:0004765,4.54e-42,90;UBERON:0002405,2.38e-40,93;UBERON:0001434,9.74e-37,100;UBERON:0003081,3.07e-19,203;UBERON:0002204,1.30e-18,167;UBERON:0009497,1.96e-11,25;UBERON:0000015,1.96e-11,25;UBERON:0002423,1.96e-11,25;UBERON:0006235,1.96e-11,25;UBERON:0004161,1.96e-11,25;UBERON:0008835,3.80e-11,22;UBERON:0003894,3.80e-11,22;UBERON:0002107,5.87e-11,19;UBERON:0006925,5.87e-11,19;UBERON:0008836,5.87e-11,19;UBERON:0009854,1.46e-10,23;UBERON:0007499,1.54e-09,25;UBERON:0000926,2.42e-09,315;UBERON:0004120,2.42e-09,315;UBERON:0006603,2.42e-09,315;UBERON:0009856,4.36e-09,26;UBERON:0002384,8.37e-09,371;UBERON:0002108,2.13e-08,4 | |||
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|short_description=p12@SERPINA1 | |short_description=p12@SERPINA1 | ||
}} | }} |
Latest revision as of 17:55, 16 September 2015
Short description: | p12@SERPINA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SERPINA1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -21bp_to_X02920_5end |
EntrezGene: | SERPINA1 |
HGNC: | 8941 |
UniProt: | P01009 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.09e-52 | 76 |
hematopoietic system | 9.98e-49 | 98 |
blood island | 9.98e-49 | 98 |
bone element | 2.89e-47 | 82 |
hemolymphoid system | 4.49e-43 | 108 |
skeletal element | 4.54e-42 | 90 |
immune system | 2.38e-40 | 93 |
skeletal system | 9.74e-37 | 100 |
lateral plate mesoderm | 3.07e-19 | 203 |
musculoskeletal system | 1.30e-18 | 167 |
epithelium of foregut-midgut junction | 1.96e-11 | 25 |
anatomical boundary | 1.96e-11 | 25 |
hepatobiliary system | 1.96e-11 | 25 |
foregut-midgut junction | 1.96e-11 | 25 |
septum transversum | 1.96e-11 | 25 |
hepatic diverticulum | 3.80e-11 | 22 |
liver primordium | 3.80e-11 | 22 |
liver | 5.87e-11 | 19 |
digestive gland | 5.87e-11 | 19 |
liver bud | 5.87e-11 | 19 |
digestive tract diverticulum | 1.46e-10 | 23 |
epithelial sac | 1.54e-09 | 25 |
mesoderm | 2.42e-09 | 315 |
mesoderm-derived structure | 2.42e-09 | 315 |
presumptive mesoderm | 2.42e-09 | 315 |
sac | 4.36e-09 | 26 |
connective tissue | 8.37e-09 | 371 |
small intestine | 2.13e-08 | 4 |