FFCP PHASE1:Hg19::chr14:94849398..94849452,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:94849398..94849452,-
|short_description=p5@SERPINA1
|description=CAGE_peak_5_at_SERPINA1_5end
|association_with_transcript=125bp_to_uc001ycw.3_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5265 | |EntrezGene=5265 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8941 | |HGNC=8941 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=125bp_to_uc001ycw.3_5end | |||
|cluster_id=chr14:94849398..94849452,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_SERPINA1_5end | |||
|id=chr14:94849398..94849452,- | |||
|ontology_enrichment_celltype=CL:0002057!2.60e-38!42;CL:0000766!2.28e-36!76;CL:0000860!1.70e-34!45;CL:0002194!1.17e-32!63;CL:0000576!1.17e-32!63;CL:0000040!1.17e-32!63;CL:0000559!1.17e-32!63;CL:0002009!5.24e-31!65;CL:0000839!2.62e-28!70;CL:0000557!1.29e-27!71;CL:0000738!1.04e-20!140;CL:0000763!2.20e-20!112;CL:0000049!2.20e-20!112;CL:0002087!9.83e-20!119;CL:0002031!4.19e-16!124;CL:0000037!1.97e-14!172;CL:0000566!1.97e-14!172;CL:0002032!4.85e-14!165;CL:0000837!4.85e-14!165;CL:0000988!2.64e-12!182;CL:0000094!3.04e-08!8;CL:0002393!5.36e-07!9;CL:0002397!5.36e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.25e-51;33!CL:0002057;5.25e-51;33!CL:0000473;1.26e-48;39!CL:0000234;1.26e-48;39!CL:0000576;5.18e-41;48!CL:0000766;8.02e-33;69!CL:0000763;8.38e-15;100!CL:0000094;4.38e-13;8!CL:0002087;6.05e-11;104!CL:0000081;4.58e-09;11!CL:0000738;6.39e-09;136!CL:0000235;7.41e-09;6!CL:0002393;3.17e-07;6!CL:0002397;3.17e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.87e-74,48;CL:0000234,9.87e-74,48;CL:0000766,4.23e-69,72;CL:0000860,4.74e-66,42;CL:0002057,4.74e-66,42;CL:0002194,2.83e-63,59;CL:0000576,2.83e-63,59;CL:0000040,2.83e-63,59;CL:0000559,2.83e-63,59;CL:0002009,1.07e-60,61;CL:0000839,6.29e-55,66;CL:0000557,7.07e-54,67;CL:0000763,3.78e-40,108;CL:0000049,3.78e-40,108;CL:0000738,2.65e-37,136;CL:0002087,3.85e-34,115;CL:0002031,4.42e-28,120;CL:0000037,1.38e-26,168;CL:0002032,2.89e-25,161;CL:0000837,2.89e-25,161;CL:0000988,2.72e-24,177;CL:0000094,3.77e-13,8;CL:0002393,2.12e-11,9;CL:0002397,2.12e-11,9;CL:0000081,4.13e-09,11;CL:0000235,7.77e-09,6;CL:0000134,1.83e-08,354;CL:0002320,5.82e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.47e-47;42!CL:0000049;1.94e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.85e-29!102;UBERON:0003061!1.85e-29!102;UBERON:0002193!2.27e-26!112;UBERON:0002405!5.03e-26!115;UBERON:0002371!4.25e-23!80;UBERON:0001474!4.36e-20!86;UBERON:0004765!8.21e-18!101;UBERON:0001434!8.21e-18!101;UBERON:0007023!2.08e-16!115;UBERON:0000062!9.67e-08!511;UBERON:0003081!3.76e-07!216;UBERON:0000178!4.19e-07!15;UBERON:0000179!4.19e-07!15;UBERON:0000463!4.19e-07!15;UBERON:0009497!6.67e-07!25;UBERON:0000015!6.67e-07!25;UBERON:0002423!6.67e-07!25;UBERON:0006235!6.67e-07!25;UBERON:0004161!6.67e-07!25;UBERON:0009854!7.68e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.00e-10;15!UBERON:0000179;3.00e-10;15!UBERON:0000463;3.00e-10;15!UBERON:0002423;4.20e-07;25!UBERON:0002107;5.14e-07;19!UBERON:0006925;5.14e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.94e-54,98;UBERON:0003061,3.94e-54,98;UBERON:0002193,3.20e-49,108;UBERON:0002371,1.16e-45,76;UBERON:0001474,3.45e-41,82;UBERON:0002405,2.22e-39,93;UBERON:0004765,3.71e-36,90;UBERON:0001434,5.18e-31,100;UBERON:0003081,1.91e-18,203;UBERON:0002204,1.24e-13,167;UBERON:0000178,2.60e-10,15;UBERON:0000179,2.60e-10,15;UBERON:0000463,2.60e-10,15;UBERON:0000926,2.27e-08,315;UBERON:0004120,2.27e-08,315;UBERON:0006603,2.27e-08,315;UBERON:0002384,2.76e-07,371;UBERON:0009497,4.00e-07,25;UBERON:0000015,4.00e-07,25;UBERON:0002423,4.00e-07,25;UBERON:0006235,4.00e-07,25;UBERON:0004161,4.00e-07,25;UBERON:0002107,5.01e-07,19;UBERON:0006925,5.01e-07,19;UBERON:0008836,5.01e-07,19;UBERON:0008835,5.32e-07,22;UBERON:0003894,5.32e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,6.68719270643137,1.53531759238885,5.41856431606266,0,0,0,0,0,0,0,6.01633342410425,3.68918480216948,2.01523926815932,2.26725566213286,1.54545340580512,17.5931868923273,16.2486655786188,15.0402117936446,20.6861842846059,20.5583944010913,12.6979612066992,17.261543539329,22.5421421745609,29.7967609659617,14.1345729102014,25.1739026597692,18.9597081232078,27.2951392336777,23.1970227549169,28.9893294934159,25.7110469591558,24.7115350848592,17.9014395223732,13.5239033076554,27.5259847517852,28.1308335351578,32.79364396503,32.340957807395,40.4834461847124,19.0948985595125,26.5956288394303,23.2392063834475,30.8753746343018,30.1987661509803,45.5705837914874,21.75929449013,18.7091783969238,8.38634582033504,11.4575203769425,9.31096735617339,14.1438516293431,8.83539505597871,14.7198341127327,11.8731699947012,0,0,0,1.28019066769952,0,0,1.32208974556972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752875595388864,0.127986611154418,1.24930726552346,0.236777252044017,0.821127996921047,0,0,0,0,0,0,0,0,1.30361867064741,6.36228757640879,2.91980922181582,0,0,0,2.0956652079634,0,0,0,0,0.930705723632056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,23.2668158488995,0,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,0,560.257253912492,1283.57234498098,1026.2020679056,0,14.0206819939149,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,1.96973604869918,3.51006397708857,5.20209068010549,0,0.503946384596579,0.141775097242386,0.268675568108545,0.581267877027924,0.766765358330422,0,0,0,0,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,1.00451418286425,4.21667878966063,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,14.9801404789436,17.9496875522415,26.1081773464702,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,9.05999643438191,1.921096040462,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,14.382274501403,0.601519410909855,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,218.96214975141,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0.192190067365106,0,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,242.796862203313,0,0,0,0,3.55213326462519,0.764637207142375,5.12682468456746,2.38231775457789,3.29089818468955,2.59389324477087,2.16012574895246,3.96562588147135,0,0,0,0,0,0,0,0.399158742865633,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0.390776190804081,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0.111308705022906,15.6563680515422,0,0.796991953004279,0.552567831062295,0.503865495708552,0,0,0,0.449341755736634,0,0,0.295930216910801,2.3948309234694,0,13.5706584453331,0.185536196323703,0,0.260427761085233,0,0.724999575434793,0,0,0,0,0,0,1.77148277162768,0,0,0,0,0.219385397153973,0,0,0.923403102045565,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43095935508857,0,0.424059214301822,0,1.99052386215701,6.19202951523374,4.888241159469,0,0,0,0.202203398942031,0,0,0,0,0.242780379534093,1.18375320854817,7.25944296291983,0.30607276163049,1.76922422959766,0,0,0,0,0,0,0,0.138674673013139,0.520679215005393,0,0,8.56160674385948,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0,0.240476460754601,12.8071796843612,0.39961921916426,0,0,19.21863976054,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0.399358000997982,0,0.223171457441873,0,0,0,37.1068788667023,40.4661864651527,33.5669648393841,0.885847333632739,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0,0,16.0763642890364,0.472091293214983,0,0,0.383830394638891,0.714695326373367,0,0,0,0,0,0,0,0,0,1337.43568454618,885.146017933638,0.387848869084652,0.13223260174269,0,0,16.0181118851542,1.25763444079733,16.5695622138878,7.93865634899121,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.554645257684261,0.0620964029413835,0,0,0,0,1.41159491818903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0.172214979660816,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.138314504928436,0,0,0.0981477185010256,0,2.56800037930351,0.462102664601353,0,0,0,0.376051641746286,0,3.90757005616546,0,0.163771917510097,2.80926563812386,0,0,0.826747186004736,0,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0,0.0887023701626388,0,0.514464028312255,0,0,0.590969204419841,0.111231401892069,0.235479278551542,0,0,0,0.431855182437243,0.47775168788705,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,6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| ||
|short_description=p5@SERPINA1 | |||
}} | }} |
Latest revision as of 18:06, 16 September 2015
Short description: | p5@SERPINA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SERPINA1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 125bp_to_uc001ycw.3_5end |
EntrezGene: | SERPINA1 |
HGNC: | 8941 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 9.87e-74 | 48 |
phagocyte | 9.87e-74 | 48 |
myeloid leukocyte | 4.23e-69 | 72 |
classical monocyte | 4.74e-66 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.74e-66 | 42 |
monopoietic cell | 2.83e-63 | 59 |
monocyte | 2.83e-63 | 59 |
monoblast | 2.83e-63 | 59 |
promonocyte | 2.83e-63 | 59 |
macrophage dendritic cell progenitor | 1.07e-60 | 61 |
myeloid lineage restricted progenitor cell | 6.29e-55 | 66 |
granulocyte monocyte progenitor cell | 7.07e-54 | 67 |
myeloid cell | 3.78e-40 | 108 |
common myeloid progenitor | 3.78e-40 | 108 |
leukocyte | 2.65e-37 | 136 |
nongranular leukocyte | 3.85e-34 | 115 |
hematopoietic lineage restricted progenitor cell | 4.42e-28 | 120 |
hematopoietic stem cell | 1.38e-26 | 168 |
hematopoietic oligopotent progenitor cell | 2.89e-25 | 161 |
hematopoietic multipotent progenitor cell | 2.89e-25 | 161 |
hematopoietic cell | 2.72e-24 | 177 |
granulocyte | 3.77e-13 | 8 |
intermediate monocyte | 2.12e-11 | 9 |
CD14-positive, CD16-positive monocyte | 2.12e-11 | 9 |
blood cell | 4.13e-09 | 11 |
macrophage | 7.77e-09 | 6 |
mesenchymal cell | 1.83e-08 | 354 |
connective tissue cell | 5.82e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.94e-54 | 98 |
blood island | 3.94e-54 | 98 |
hemolymphoid system | 3.20e-49 | 108 |
bone marrow | 1.16e-45 | 76 |
bone element | 3.45e-41 | 82 |
immune system | 2.22e-39 | 93 |
skeletal element | 3.71e-36 | 90 |
skeletal system | 5.18e-31 | 100 |
lateral plate mesoderm | 1.91e-18 | 203 |
musculoskeletal system | 1.24e-13 | 167 |
blood | 2.60e-10 | 15 |
haemolymphatic fluid | 2.60e-10 | 15 |
organism substance | 2.60e-10 | 15 |
mesoderm | 2.27e-08 | 315 |
mesoderm-derived structure | 2.27e-08 | 315 |
presumptive mesoderm | 2.27e-08 | 315 |
connective tissue | 2.76e-07 | 371 |
epithelium of foregut-midgut junction | 4.00e-07 | 25 |
anatomical boundary | 4.00e-07 | 25 |
hepatobiliary system | 4.00e-07 | 25 |
foregut-midgut junction | 4.00e-07 | 25 |
septum transversum | 4.00e-07 | 25 |
liver | 5.01e-07 | 19 |
digestive gland | 5.01e-07 | 19 |
liver bud | 5.01e-07 | 19 |
hepatic diverticulum | 5.32e-07 | 22 |
liver primordium | 5.32e-07 | 22 |