FFCP PHASE1:Hg19::chr1:145610545..145610556,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:145610545..145610556,+
|short_description=p13@RNF115
|description=CAGE_peak_13_at_RNF115_5end
|association_with_transcript=-479bp_to_ENST00000369291,NM_014...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27246 | |EntrezGene=27246 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18154 | |HGNC=18154 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y4L5 | |UniProt=Q9Y4L5 | ||
|association_with_transcript=-479bp_to_ENST00000369291,NM_014455,uc001eoj.2,uc001eok.2,uc009wiy.2_5end | |||
|cluster_id=chr1:145610545..145610556,+ | |||
|description=CAGE_peak_13_at_RNF115_5end | |||
|id=chr1:145610545..145610556,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002582;8.69e-18;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002582,1.12e-17,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.10e-50;1!UBERON:0003056;8.69e-18;3!UBERON:0009847;8.69e-18;3!UBERON:0003353;8.69e-18;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.50e-12!115;UBERON:0001049!2.07e-08!57;UBERON:0005068!2.07e-08!57;UBERON:0006241!2.07e-08!57;UBERON:0007135!2.07e-08!57;UBERON:0003937!5.37e-08!12;UBERON:0005399!5.37e-08!12;UBERON:0001893!6.68e-08!34;UBERON:0000062!7.73e-08!511;UBERON:0000955!1.16e-07!69;UBERON:0006238!1.16e-07!69;UBERON:0001869!2.11e-07!32;UBERON:0002780!3.87e-07!41;UBERON:0001890!3.87e-07!41;UBERON:0006240!3.87e-07!41;UBERON:0002791!4.27e-07!33;UBERON:0002616!5.23e-07!59;UBERON:0002020!5.56e-07!34;UBERON:0003528!5.56e-07!34;UBERON:0003080!6.81e-07!42;UBERON:0002619!9.21e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.10e-50;1!UBERON:0001785;3.10e-50;1!UBERON:0002464;3.10e-50;1!UBERON:0004904;3.10e-50;1!UBERON:0001021;3.10e-50;1!UBERON:0003714;6.30e-26;2!UBERON:0005162;6.30e-26;2!UBERON:0000122;6.30e-26;2!UBERON:0002021;3.10e-11;5!UBERON:0000010;8.14e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.42e-50,1;UBERON:0001785,2.42e-50,1;UBERON:0002464,2.42e-50,1;UBERON:0004904,2.42e-50,1;UBERON:0001021,2.42e-50,1;UBERON:0003902,2.42e-50,1;UBERON:0005425,2.42e-50,1;UBERON:0003714,5.56e-26,2;UBERON:0005162,5.56e-26,2;UBERON:0000122,5.56e-26,2;UBERON:0001781,1.00e-13,4;UBERON:0002021,3.26e-11,5;UBERON:0000966,1.32e-09,6;UBERON:0005388,1.32e-09,6;UBERON:0001802,1.32e-09,6;UBERON:0000010,7.91e-07,8 | |||
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| ||
|short_description=p13@RNF115 | |||
}} | }} |
Latest revision as of 18:45, 16 September 2015
Short description: | p13@RNF115 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RNF115_5end |
Coexpression cluster: | NA |
Association with transcript: | -479bp_to_ENST00000369291, NM_014455, uc001eoj.2, uc001eok.2, uc009wiy.2_5end |
EntrezGene: | RNF115 |
HGNC: | 18154 |
UniProt: | Q9Y4L5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
visceral preadipocyte | 1.12e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.42e-50 | 1 |
cranial nerve | 2.42e-50 | 1 |
nerve trunk | 2.42e-50 | 1 |
nerve connecting eye with brain | 2.42e-50 | 1 |
nerve | 2.42e-50 | 1 |
retinal neural layer | 2.42e-50 | 1 |
presumptive neural retina | 2.42e-50 | 1 |
neural tissue | 5.56e-26 | 2 |
multi cell component structure | 5.56e-26 | 2 |
neuron projection bundle | 5.56e-26 | 2 |
layer of retina | 1.00e-13 | 4 |
occipital lobe | 3.26e-11 | 5 |
retina | 1.32e-09 | 6 |
photoreceptor array | 1.32e-09 | 6 |
posterior segment of eyeball | 1.32e-09 | 6 |
peripheral nervous system | 7.91e-07 | 8 |