FFCP PHASE1:Hg19::chr10:124895520..124895540,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=340784 | |EntrezGene=340784 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5019 | |HGNC=5019 | ||
|TSSclassifier=strong | |||
|UniProt=A6NHT5 | |UniProt=A6NHT5 | ||
|association_with_transcript=-26bp_to_NM_001105574,uc010quc.1_5end | |association_with_transcript=-26bp_to_NM_001105574,uc010quc.1_5end | ||
|cluster_id=chr10:124895520..124895540,+ | |||
|coexpression_cluster_id=C2043 | |||
|description=CAGE_peak_3_at_HMX3_5end | |description=CAGE_peak_3_at_HMX3_5end | ||
|id=chr10:124895520..124895540,+ | |id=chr10:124895520..124895540,+ | ||
|ontology_enrichment_celltype=CL:0000988!5.29e-07!182 | |ontology_enrichment_celltype=CL:0000988!5.29e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000946;7.97e-10;1!CL:0000786;7.97e-10;1!CL:0002379;3.25e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.31e-11,177;CL:0000946,7.98e-10,1;CL:0000786,7.98e-10,1;CL:0000980,7.98e-10,1;CL:0002379,2.55e-09,1;CL:0002032,1.94e-08,161;CL:0000837,1.94e-08,161;CL:0000037,5.62e-08,168;CL:0000763,4.29e-07,108;CL:0000049,4.29e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!8.57e-16!235;DOID:14566!3.17e-15!239;DOID:1240!1.68e-14!39;DOID:8692!2.92e-14!31;DOID:2531!2.49e-13!51;DOID:0060083!2.49e-13!51;DOID:0050686!6.75e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.79e-28;31!DOID:1240;1.95e-21;39!DOID:2531;1.53e-15;51!DOID:0060083;1.53e-15;51!DOID:1036;1.09e-09;8!DOID:630;3.25e-09;1!DOID:0050177;3.25e-09;1!DOID:3620;3.25e-09;1!DOID:3565;3.25e-09;1!DOID:0050427;3.25e-09;1!DOID:2355;3.25e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.56e-29,31;DOID:1240,1.48e-27,39;DOID:2531,3.45e-24,51;DOID:0060083,3.45e-24,51;DOID:0050686,5.26e-12,137;DOID:1036,1.09e-09,8;DOID:630,2.16e-09,1;DOID:0050177,2.16e-09,1;DOID:0050427,2.16e-09,1;DOID:3620,2.55e-09,1;DOID:3565,2.55e-09,1;DOID:2355,5.72e-09,1;DOID:162,7.25e-09,235;DOID:14566,1.31e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.11e-19!9;UBERON:0001557!1.44e-08!19;UBERON:0008947!2.64e-08!38;UBERON:0003258!2.64e-08!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.24e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.10e-07,10;UBERON:0000358,1.10e-07,10;UBERON:0000307,1.10e-07,10;UBERON:0000091,1.10e-07,10;UBERON:0000087,1.10e-07,10;UBERON:0007010,1.10e-07,10;UBERON:0007806,1.10e-07,10;UBERON:0008780,1.10e-07,10;UBERON:0005728,1.10e-07,10 | |||
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| ||
|short_description=p3@HMX3 | |short_description=p3@HMX3 | ||
}} | }} |
Latest revision as of 21:03, 16 September 2015
Short description: | p3@HMX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HMX3_5end |
Coexpression cluster: | C2043_plasma_acute_biphenotypic_small_chronic_alveolar_cord |
Association with transcript: | -26bp_to_NM_001105574, uc010quc.1_5end |
EntrezGene: | HMX3 |
HGNC: | 5019 |
UniProt: | A6NHT5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.31e-11 | 177 |
antibody secreting cell | 7.98e-10 | 1 |
plasma cell | 7.98e-10 | 1 |
plasmablast | 7.98e-10 | 1 |
meningothelial cell | 2.55e-09 | 1 |
hematopoietic oligopotent progenitor cell | 1.94e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.94e-08 | 161 |
hematopoietic stem cell | 5.62e-08 | 168 |
myeloid cell | 4.29e-07 | 108 |
common myeloid progenitor | 4.29e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.10e-07 | 10 |
blastocyst | 1.10e-07 | 10 |
blastula | 1.10e-07 | 10 |
bilaminar disc | 1.10e-07 | 10 |
inner cell mass | 1.10e-07 | 10 |
cleaving embryo | 1.10e-07 | 10 |
connecting stalk | 1.10e-07 | 10 |
inner cell mass derived epiblast | 1.10e-07 | 10 |
extraembryonic mesoderm | 1.10e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.56e-29 | 31 |
leukemia | 1.48e-27 | 39 |
hematologic cancer | 3.45e-24 | 51 |
immune system cancer | 3.45e-24 | 51 |
organ system cancer | 5.26e-12 | 137 |
chronic leukemia | 1.09e-09 | 8 |
genetic disease | 2.16e-09 | 1 |
monogenic disease | 2.16e-09 | 1 |
xeroderma pigmentosum | 2.16e-09 | 1 |
central nervous system cancer | 2.55e-09 | 1 |
meningioma | 2.55e-09 | 1 |
anemia | 5.72e-09 | 1 |
cancer | 7.25e-09 | 235 |
disease of cellular proliferation | 1.31e-08 | 239 |