FFCP PHASE1:Hg19::chr9:20620829..20620848,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4300 | |EntrezGene=4300 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7136 | |HGNC=7136 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc011lng.1_5end | |association_with_transcript=0bp_to_uc011lng.1_5end | ||
|cluster_id=chr9:20620829..20620848,- | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_7_at_MLLT3_5end | |description=CAGE_peak_7_at_MLLT3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000791!2.54e-18!18;CL:0000789!2.54e-18!18;CL:0002420!2.54e-18!18;CL:0002419!2.54e-18!18;CL:0000790!2.54e-18!18;CL:0000084!6.58e-14!25;CL:0000827!6.58e-14!25;CL:0000625!7.23e-13!11;CL:0000838!1.09e-10!52;CL:0000542!2.59e-10!53;CL:0000051!2.59e-10!53;CL:0000624!1.45e-08!6 | |ontology_enrichment_celltype=CL:0000791!2.54e-18!18;CL:0000789!2.54e-18!18;CL:0002420!2.54e-18!18;CL:0002419!2.54e-18!18;CL:0000790!2.54e-18!18;CL:0000084!6.58e-14!25;CL:0000827!6.58e-14!25;CL:0000625!7.23e-13!11;CL:0000838!1.09e-10!52;CL:0000542!2.59e-10!53;CL:0000051!2.59e-10!53;CL:0000624!1.45e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.34e-38;18!CL:0000789;3.34e-38;18!CL:0002419;3.34e-38;18!CL:0000084;1.55e-26;25!CL:0000624;7.10e-23;6!CL:0000625;1.31e-20;11!CL:0000898;2.65e-12;3!CL:0000226;4.15e-12;3!CL:0000842;4.15e-12;3!CL:0000815;1.04e-08;2!CL:0000792;1.04e-08;2!CL:0002677;1.04e-08;2!CL:0000542;3.60e-07;53 | |ontology_enrichment_celltype_v019=CL:0000791;3.34e-38;18!CL:0000789;3.34e-38;18!CL:0002419;3.34e-38;18!CL:0000084;1.55e-26;25!CL:0000624;7.10e-23;6!CL:0000625;1.31e-20;11!CL:0000898;2.65e-12;3!CL:0000226;4.15e-12;3!CL:0000842;4.15e-12;3!CL:0000815;1.04e-08;2!CL:0000792;1.04e-08;2!CL:0002677;1.04e-08;2!CL:0000542;3.60e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.56e-38,18;CL:0000789,1.56e-38,18;CL:0002420,1.56e-38,18;CL:0002419,1.56e-38,18;CL:0000790,1.56e-38,18;CL:0000084,9.03e-27,25;CL:0000827,9.03e-27,25;CL:0000624,5.09e-23,6;CL:0000625,8.22e-21,11;CL:0000838,8.55e-15,52;CL:0000542,1.93e-14,53;CL:0000051,1.93e-14,53;CL:0000898,2.66e-12,3;CL:0000226,4.49e-12,3;CL:0000842,4.49e-12,3;CL:0002087,5.16e-09,115;CL:0000815,9.89e-09,2;CL:0000792,9.89e-09,2;CL:0002677,9.89e-09,2;CL:0000738,6.61e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;3.34e-38;18!CL:0000051;3.60e-07;53 | |ontology_enrichment_development_v019=CL:0000790;3.34e-38;18!CL:0000051;3.60e-07;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.10e-11!115;UBERON:0000178!8.77e-07!15;UBERON:0000179!8.77e-07!15;UBERON:0000463!8.77e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!1.10e-11!115;UBERON:0000178!8.77e-07!15;UBERON:0000179!8.77e-07!15;UBERON:0000463!8.77e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.05e-14;15!UBERON:0000179;6.05e-14;15!UBERON:0000463;6.05e-14;15!UBERON:0002390;2.00e-08;32!UBERON:0002370;4.84e-08;2!UBERON:0005058;4.84e-08;2!UBERON:0009113;4.84e-08;2!UBERON:0001829;8.57e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0000178;6.05e-14;15!UBERON:0000179;6.05e-14;15!UBERON:0000463;6.05e-14;15!UBERON:0002390;2.00e-08;32!UBERON:0002370;4.84e-08;2!UBERON:0005058;4.84e-08;2!UBERON:0009113;4.84e-08;2!UBERON:0001829;8.57e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.70e-14,15;UBERON:0000179,5.70e-14,15;UBERON:0000463,5.70e-14,15;UBERON:0003408,2.32e-12,10;UBERON:0002370,8.84e-09,4;UBERON:0005058,8.84e-09,4;UBERON:0009113,8.84e-09,4;UBERON:0003295,8.84e-09,4;UBERON:0005562,8.84e-09,4;UBERON:0001829,6.93e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.152826811495903,0,0.157421562627358,0,0.383829398097213,0.619264493264304,0,0,0,0,0,0.293600439334847,1.10799081706375,0.200544447470142,1.30206522429511,0,0.647787332037959,0.257575567634187,0,0,0,0,0.822335776043652,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0,0.641858054152187,0.639337125799041,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,9.24535919535015,3.53709686474248,3.90642848099067,10.0311897234407,12.71096839871,7.101717086021,13.6378709885538,0.891283655081389,2.65145316727353,1.77227115666897,1.35401931882508,2.68991771423918,2.73124629875744,3.4531959966772,1.38175008892924,4.34704628602579,16.0149488215025,16.0524496853828,8.36284190439814,1.0197840842781,4.21542542962113,3.09264700934367,3.28925599625354,3.50421955756506,0.651083453856419,1.90090408889675,4.9689789295665,2.55973222308837,6.24653632761729,2.8413270245282,0.821127996921047,2.62088766192152,0.267440195783507,4.48955652036677,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,3.34952292343276,0.646882724578552,1.54011643535698,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51505644408909,3.01999881146064,3.41528184971022,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0.385076685522074,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.330569830721956,0,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,0.764637207142375,1.70894156152249,1.66762242820452,1.23408681925858,0,1.08006287447623,0.79312517629427,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0.383010740264733,0,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.828851746593443,0,0,0.123084805461069,0,1.07842021376792,0.179021174675609,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.723578631752448,0,0.110579259931225,0.295547618953547,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.282706142867882,0,0,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0.394584402849391,0,0.91821828489147,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0.429226048136571,0,0.0671834724867263,0,2.32991899054908,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0.704815022316672,0.427149650270779,0.471612915298998,0.414239055347196,0.992332043623902,0,0.60896299190448,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.213383459388282,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0,0,0.206686796501184,0.0634158101939068,1.09394961803644,1.64477330057155,0,0.527613733078862,0.383287282918786,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0,0,0.235479278551542,0.942693539496011,3.08299379645168,1.82631744101899,0,0,0,0,0,0,0,0,0.17071847709395,0,2.58136415292167,0,0,0,0,0,0,0.223710863595585,0.098150233615243,1.34109717480496,0,0,0,0.485710993059139,0,0.198950775161368,0,0.11294608203896,0,0.754814217833368,0.154348316215889,0,1.41095188908457,0.490296643507811,0,0.196308467114945,0,0,0,0,0.45120521581504,0,0,0,0.0802413666891683,0,1.37618785021362,0,0.315543124386369,0.0679914901909147,0.436350690340377,2.1161073620616,0,0,0,0,0,0.126698501011437,0,0,0.18378979906969,0,0,0,0,0.20686599172379,0.426467963801962,0.23806443146374,1.35636710655613,2.48298857183432,0,0.190941474834495,0.606351566874658,0,0.342233301085281,0.202056159043763,0.502055437748735,0,0.0814032686109745,0,0,0.808426818959282,0,0.488965776731466,0,0.665756774185513,1.00636896795513,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.152826811495903,0,0.157421562627358,0,0.383829398097213,0.619264493264304,0,0,0,0,0,0.293600439334847,1.10799081706375,0.200544447470142,1.30206522429511,0,0.647787332037959,0.257575567634187,0,0,0,0,0.822335776043652,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0,0.641858054152187,0.639337125799041,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,9.24535919535015,3.53709686474248,3.90642848099067,10.0311897234407,12.71096839871,7.101717086021,13.6378709885538,0.891283655081389,2.65145316727353,1.77227115666897,1.35401931882508,2.68991771423918,2.73124629875744,3.4531959966772,1.38175008892924,4.34704628602579,16.0149488215025,16.0524496853828,8.36284190439814,1.0197840842781,4.21542542962113,3.09264700934367,3.28925599625354,3.50421955756506,0.651083453856419,1.90090408889675,4.9689789295665,2.55973222308837,6.24653632761729,2.8413270245282,0.821127996921047,2.62088766192152,0.267440195783507,4.48955652036677,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,3.34952292343276,0.646882724578552,1.54011643535698,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51505644408909,3.01999881146064,3.41528184971022,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0.385076685522074,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.330569830721956,0,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,0.764637207142375,1.70894156152249,1.66762242820452,1.23408681925858,0,1.08006287447623,0.79312517629427,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0.383010740264733,0,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.828851746593443,0,0,0.123084805461069,0,1.07842021376792,0.179021174675609,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.723578631752448,0,0.110579259931225,0.295547618953547,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.282706142867882,0,0,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0.394584402849391,0,0.91821828489147,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0.429226048136571,0,0.0671834724867263,0,2.32991899054908,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0.704815022316672,0.427149650270779,0.471612915298998,0.414239055347196,0.992332043623902,0,0.60896299190448,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.213383459388282,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0,0,0.206686796501184,0.0634158101939068,1.09394961803644,1.64477330057155,0,0.527613733078862,0.383287282918786,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0,0,0.235479278551542,0.942693539496011,3.08299379645168,1.82631744101899,0,0,0,0,0,0,0,0,0.17071847709395,0,2.58136415292167,0,0,0,0,0,0,0.223710863595585,0.098150233615243,1.34109717480496,0,0,0,0.485710993059139,0,0.198950775161368,0,0.11294608203896,0,0.754814217833368,0.154348316215889,0,1.41095188908457,0.490296643507811,0,0.196308467114945,0,0,0,0,0.45120521581504,0,0,0,0.0802413666891683,0,1.37618785021362,0,0.315543124386369,0.0679914901909147,0.436350690340377,2.1161073620616,0,0,0,0,0,0.126698501011437,0,0,0.18378979906969,0,0,0,0,0.20686599172379,0.426467963801962,0.23806443146374,1.35636710655613,2.48298857183432,0,0.190941474834495,0.606351566874658,0,0.342233301085281,0.202056159043763,0.502055437748735,0,0.0814032686109745,0,0,0.808426818959282,0,0.488965776731466,0,0.665756774185513,1.00636896795513,0.320568492303233 | ||
|short_description=p7@MLLT3 | |short_description=p7@MLLT3 | ||
}} | }} |
Latest revision as of 22:01, 16 September 2015
Short description: | p7@MLLT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MLLT3_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_uc011lng.1_5end |
EntrezGene: | MLLT3 |
HGNC: | 7136 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.56e-38 | 18 |
alpha-beta T cell | 1.56e-38 | 18 |
immature T cell | 1.56e-38 | 18 |
mature T cell | 1.56e-38 | 18 |
immature alpha-beta T cell | 1.56e-38 | 18 |
T cell | 9.03e-27 | 25 |
pro-T cell | 9.03e-27 | 25 |
CD4-positive, alpha-beta T cell | 5.09e-23 | 6 |
CD8-positive, alpha-beta T cell | 8.22e-21 | 11 |
lymphoid lineage restricted progenitor cell | 8.55e-15 | 52 |
lymphocyte | 1.93e-14 | 53 |
common lymphoid progenitor | 1.93e-14 | 53 |
naive T cell | 2.66e-12 | 3 |
single nucleate cell | 4.49e-12 | 3 |
mononuclear cell | 4.49e-12 | 3 |
nongranular leukocyte | 5.16e-09 | 115 |
regulatory T cell | 9.89e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.89e-09 | 2 |
naive regulatory T cell | 9.89e-09 | 2 |
leukocyte | 6.61e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 5.70e-14 | 15 |
haemolymphatic fluid | 5.70e-14 | 15 |
organism substance | 5.70e-14 | 15 |
gland of gut | 2.32e-12 | 10 |
thymus | 8.84e-09 | 4 |
hemolymphoid system gland | 8.84e-09 | 4 |
thymic region | 8.84e-09 | 4 |
pharyngeal gland | 8.84e-09 | 4 |
thymus primordium | 8.84e-09 | 4 |
major salivary gland | 6.93e-08 | 2 |