FFCP PHASE1:Hg19::chr10:126432968..126432979,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:126432968..126432979,-
|short_description=p5@FAM53B
|description=CAGE_peak_5_at_FAM53B_5end
|association_with_transcript=-38bp_to_NM_014661,uc001lhv.1,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9679 | |EntrezGene=9679 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28968 | |HGNC=28968 | ||
|TSSclassifier=strong | |||
|UniProt=Q14153 | |UniProt=Q14153 | ||
|association_with_transcript=-38bp_to_NM_014661,uc001lhv.1,uc001lhw.2_5end | |||
|cluster_id=chr10:126432968..126432979,- | |||
|coexpression_cluster_id=C2985 | |||
|description=CAGE_peak_5_at_FAM53B_5end | |||
|id=chr10:126432968..126432979,- | |||
|ontology_enrichment_celltype=CL:0000738!6.22e-18!140;CL:0000037!6.69e-17!172;CL:0000566!6.69e-17!172;CL:0000988!1.05e-15!182;CL:0002032!1.22e-14!165;CL:0000837!1.22e-14!165;CL:0002031!1.75e-14!124;CL:0002087!6.83e-14!119;CL:0000838!4.75e-12!52;CL:0000542!4.84e-12!53;CL:0000051!4.84e-12!53;CL:0000236!2.56e-08!14;CL:0000945!4.67e-08!24;CL:0000826!4.67e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.05e-12;13!CL:0000542;7.85e-10;53!CL:0000945;1.55e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.06e-21,136;CL:0000037,1.90e-18,168;CL:0000988,3.20e-16,177;CL:0002032,2.08e-15,161;CL:0000837,2.08e-15,161;CL:0002031,2.35e-15,120;CL:0000838,3.62e-15,52;CL:0000542,1.18e-14,53;CL:0000051,1.18e-14,53;CL:0002087,4.40e-14,115;CL:0000236,5.09e-11,14;CL:0002393,2.16e-08,9;CL:0002397,2.16e-08,9;CL:0000945,1.17e-07,24;CL:0000826,1.17e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;7.85e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.53e-19!115;UBERON:0001049!2.51e-10!57;UBERON:0005068!2.51e-10!57;UBERON:0006241!2.51e-10!57;UBERON:0007135!2.51e-10!57;UBERON:0002616!1.66e-08!59;UBERON:0002020!1.96e-08!34;UBERON:0003528!1.96e-08!34;UBERON:0001893!3.09e-08!34;UBERON:0005743!3.81e-08!86;UBERON:0003080!4.61e-08!42;UBERON:0001017!4.96e-08!82;UBERON:0002780!5.70e-08!41;UBERON:0001890!5.70e-08!41;UBERON:0006240!5.70e-08!41;UBERON:0002791!5.72e-08!33;UBERON:0001869!2.68e-07!32;UBERON:0002390!3.38e-07!102;UBERON:0003061!3.38e-07!102;UBERON:0002193!6.88e-07!112;UBERON:0000073!7.69e-07!94;UBERON:0001016!7.69e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.71e-08;34!UBERON:0003528;2.95e-08;34!UBERON:0002020;2.95e-08;34!UBERON:0001869;1.74e-07;32!UBERON:0002791;1.99e-07;32!UBERON:0002780;2.86e-07;41!UBERON:0001890;2.86e-07;41!UBERON:0000073;5.19e-07;53!UBERON:0002616;5.19e-07;53!UBERON:0002619;9.53e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.55e-17,114;UBERON:0001049,1.03e-11,56;UBERON:0005068,1.03e-11,56;UBERON:0006241,1.03e-11,56;UBERON:0007135,1.03e-11,56;UBERON:0000073,3.43e-11,53;UBERON:0002616,3.43e-11,53;UBERON:0003528,1.34e-09,34;UBERON:0002020,1.34e-09,34;UBERON:0002780,2.04e-09,41;UBERON:0001890,2.04e-09,41;UBERON:0003080,2.04e-09,41;UBERON:0006240,2.04e-09,41;UBERON:0001893,2.52e-09,34;UBERON:0001017,3.38e-08,81;UBERON:0002791,3.50e-08,32;UBERON:0001869,5.88e-08,32;UBERON:0000955,1.23e-07,68;UBERON:0006238,1.23e-07,68;UBERON:0003075,5.37e-07,82;UBERON:0007284,5.37e-07,82;UBERON:0001016,5.60e-07,89 | |||
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| ||
|short_description=p5@FAM53B | |||
}} | }} |
Latest revision as of 22:47, 16 September 2015
Short description: | p5@FAM53B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FAM53B_5end |
Coexpression cluster: | C2985_Melanocyte_CD19_Natural_Dendritic_CD8_thalamus_blood |
Association with transcript: | -38bp_to_NM_014661, uc001lhv.1, uc001lhw.2_5end |
EntrezGene: | FAM53B |
HGNC: | 28968 |
UniProt: | Q14153 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.06e-21 | 136 |
hematopoietic stem cell | 1.90e-18 | 168 |
hematopoietic cell | 3.20e-16 | 177 |
hematopoietic oligopotent progenitor cell | 2.08e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.08e-15 | 161 |
hematopoietic lineage restricted progenitor cell | 2.35e-15 | 120 |
lymphoid lineage restricted progenitor cell | 3.62e-15 | 52 |
lymphocyte | 1.18e-14 | 53 |
common lymphoid progenitor | 1.18e-14 | 53 |
nongranular leukocyte | 4.40e-14 | 115 |
B cell | 5.09e-11 | 14 |
intermediate monocyte | 2.16e-08 | 9 |
CD14-positive, CD16-positive monocyte | 2.16e-08 | 9 |
lymphocyte of B lineage | 1.17e-07 | 24 |
pro-B cell | 1.17e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.55e-17 | 114 |
neural tube | 1.03e-11 | 56 |
neural rod | 1.03e-11 | 56 |
future spinal cord | 1.03e-11 | 56 |
neural keel | 1.03e-11 | 56 |
regional part of nervous system | 3.43e-11 | 53 |
regional part of brain | 3.43e-11 | 53 |
brain grey matter | 1.34e-09 | 34 |
gray matter | 1.34e-09 | 34 |
regional part of forebrain | 2.04e-09 | 41 |
forebrain | 2.04e-09 | 41 |
anterior neural tube | 2.04e-09 | 41 |
future forebrain | 2.04e-09 | 41 |
telencephalon | 2.52e-09 | 34 |
central nervous system | 3.38e-08 | 81 |
regional part of telencephalon | 3.50e-08 | 32 |
cerebral hemisphere | 5.88e-08 | 32 |
brain | 1.23e-07 | 68 |
future brain | 1.23e-07 | 68 |
neural plate | 5.37e-07 | 82 |
presumptive neural plate | 5.37e-07 | 82 |
nervous system | 5.60e-07 | 89 |