FFCP PHASE1:Hg19::chr2:31637560..31637614,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7498 | |EntrezGene=7498 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12805 | |HGNC=12805 | ||
|TSSclassifier=strong | |||
|UniProt=P47989 | |UniProt=P47989 | ||
|association_with_transcript=0bp_to_ENST00000379416,NM_000379,uc002rnv.1_5end | |association_with_transcript=0bp_to_ENST00000379416,NM_000379,uc002rnv.1_5end | ||
|cluster_id=chr2:31637560..31637614,- | |||
|description=CAGE_peak_1_at_XDH_5end | |description=CAGE_peak_1_at_XDH_5end | ||
|id=chr2:31637560..31637614,- | |id=chr2:31637560..31637614,- | ||
|ontology_enrichment_celltype=CL:0000223!1.92e-25!59;CL:0002076!3.48e-25!43;CL:0000066!1.38e-19!254;CL:0002368!3.80e-10!13;CL:0002251!4.17e-10!21;CL:0002159!4.01e-07!13 | |ontology_enrichment_celltype=CL:0000223!1.92e-25!59;CL:0002076!3.48e-25!43;CL:0000066!1.38e-19!254;CL:0002368!3.80e-10!13;CL:0002251!4.17e-10!21;CL:0002159!4.01e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.68e-16;42!CL:0002368;5.14e-15;13!CL:0002159;7.51e-10;14!CL:0002202;3.21e-09;9!CL:0002632;3.21e-09;9!CL:0000244;1.62e-08;4!CL:0000731;1.62e-08;4!CL:0002327;2.41e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.29e-20,253;CL:0002076,7.24e-20,42;CL:0000223,9.28e-20,58;CL:0002368,5.33e-15,13;CL:0002159,7.64e-10,14;CL:0002202,3.30e-09,9;CL:0002632,3.30e-09,9;CL:0000244,1.64e-08,4;CL:0000731,1.64e-08,4;CL:0002327,2.43e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000223;1.69e-12;58 | |||
|ontology_enrichment_disease=DOID:305!1.34e-10!106;DOID:299!3.19e-09!25;DOID:1749!7.99e-09!14;DOID:0050687!1.22e-08!143 | |ontology_enrichment_disease=DOID:305!1.34e-10!106;DOID:299!3.19e-09!25;DOID:1749!7.99e-09!14;DOID:0050687!1.22e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.23e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.10e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.54e-30!169;UBERON:0000925!1.54e-30!169;UBERON:0006595!1.54e-30!169;UBERON:0001007!2.29e-25!155;UBERON:0001555!2.29e-25!155;UBERON:0007026!2.29e-25!155;UBERON:0004921!1.09e-21!129;UBERON:0004185!1.09e-21!129;UBERON:0000077!2.83e-18!130;UBERON:0000466!3.13e-15!126;UBERON:0001041!4.67e-15!98;UBERON:0005911!2.71e-13!82;UBERON:0000464!1.03e-12!104;UBERON:0001004!1.21e-12!72;UBERON:0000161!2.36e-11!35;UBERON:0002365!1.15e-09!31;UBERON:0002330!1.15e-09!31;UBERON:0000166!1.68e-09!21;UBERON:0002530!2.53e-09!59;UBERON:0005177!5.57e-09!107;UBERON:0000062!3.95e-08!511;UBERON:0000165!4.42e-08!28;UBERON:0000930!4.42e-08!28;UBERON:0000065!6.10e-08!53;UBERON:0005409!7.24e-08!35;UBERON:0000481!7.58e-08!347;UBERON:0003104!1.24e-07!238;UBERON:0009142!1.24e-07!238;UBERON:0005153!2.12e-07!37;UBERON:0003100!2.17e-07!41;UBERON:0000365!2.24e-07!5;UBERON:0003929!2.90e-07!54;UBERON:0001048!3.12e-07!168;UBERON:0002553!4.67e-07!70;UBERON:0005178!4.99e-07!34;UBERON:0002224!4.99e-07!34;UBERON:0001044!9.41e-07!6;UBERON:0003293!9.41e-07!6;UBERON:0003294!9.41e-07!6;UBERON:0010047!9.41e-07!6;UBERON:0000167!9.41e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;1.33e-11;31!UBERON:0002330;1.33e-11;31!UBERON:0000365;2.46e-10;5!UBERON:0004921;3.93e-10;33!UBERON:0000486;1.31e-09;12!UBERON:0000161;2.96e-09;19!UBERON:0000166;2.96e-09;19!UBERON:0000165;2.99e-09;28!UBERON:0005910;1.66e-08;6!UBERON:0001007;2.25e-08;81!UBERON:0001911;2.41e-08;4!UBERON:0005911;4.48e-08;36!UBERON:0001555;5.99e-08;54!UBERON:0002294;6.94e-08;7!UBERON:0001173;6.94e-08;7!UBERON:0004807;7.31e-08;22!UBERON:0005178;1.81e-07;34!UBERON:0002224;1.81e-07;34!UBERON:0001044;5.14e-07;6!UBERON:0003293;5.14e-07;6!UBERON:0003294;5.14e-07;6!UBERON:0010047;5.14e-07;6!UBERON:0003408;5.14e-07;6!UBERON:0000167;5.14e-07;6!UBERON:0002108;6.25e-07;4!UBERON:0005181;6.78e-07;35!UBERON:0000160;7.62e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.98e-27,160;UBERON:0000925,1.98e-27,160;UBERON:0006595,1.98e-27,160;UBERON:0001007,9.66e-21,145;UBERON:0001555,9.66e-21,145;UBERON:0007026,9.66e-21,145;UBERON:0004921,8.40e-19,118;UBERON:0001004,2.38e-13,74;UBERON:0005911,1.86e-12,82;UBERON:0000161,3.06e-12,36;UBERON:0001041,3.89e-12,87;UBERON:0002365,1.12e-11,31;UBERON:0002330,1.12e-11,31;UBERON:0000166,1.20e-10,22;UBERON:0000365,2.46e-10,5;UBERON:0000065,4.63e-09,54;UBERON:0000165,8.91e-09,29;UBERON:0000930,8.91e-09,29;UBERON:0005177,1.34e-08,101;UBERON:0005910,1.66e-08,6;UBERON:0005178,2.14e-08,34;UBERON:0002224,2.14e-08,34;UBERON:0001911,2.43e-08,4;UBERON:0005333,2.43e-08,4;UBERON:0008425,2.43e-08,4;UBERON:0005311,2.43e-08,4;UBERON:0005153,3.25e-08,37;UBERON:0005181,4.76e-08,35;UBERON:0003102,6.33e-08,99;UBERON:0005157,1.18e-07,47;UBERON:0011216,1.31e-07,223;UBERON:0002530,5.10e-07,59;UBERON:0001044,5.70e-07,6;UBERON:0003293,5.70e-07,6;UBERON:0003294,5.70e-07,6;UBERON:0010047,5.70e-07,6;UBERON:0000167,5.70e-07,6;UBERON:0002108,6.16e-07,4;UBERON:0000160,7.02e-07,17 | |||
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|short_description=p1@XDH | |short_description=p1@XDH | ||
}} | }} |
Latest revision as of 22:52, 16 September 2015
Short description: | p1@XDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_XDH_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000379416, NM_000379, uc002rnv.1_5end |
EntrezGene: | XDH |
HGNC: | 12805 |
UniProt: | P47989 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.29e-20 | 253 |
endo-epithelial cell | 7.24e-20 | 42 |
endodermal cell | 9.28e-20 | 58 |
respiratory epithelial cell | 5.33e-15 | 13 |
general ecto-epithelial cell | 7.64e-10 | 14 |
epithelial cell of tracheobronchial tree | 3.30e-09 | 9 |
epithelial cell of lower respiratory tract | 3.30e-09 | 9 |
transitional epithelial cell | 1.64e-08 | 4 |
urothelial cell | 1.64e-08 | 4 |
mammary gland epithelial cell | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.10e-09 | 14 |