FFCP PHASE1:Hg19::chr15:23034271..23034285,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81614 | |EntrezGene=81614 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17044 | |HGNC=17044 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=84bp_to_ENST00000539711_5end | |association_with_transcript=84bp_to_ENST00000539711_5end | ||
|cluster_id=chr15:23034271..23034285,- | |||
|description=CAGE_peak_2_at_NIPA2_5end | |description=CAGE_peak_2_at_NIPA2_5end | ||
|id=chr15:23034271..23034285,- | |id=chr15:23034271..23034285,- | ||
|ontology_enrichment_celltype=CL:0000055!3.32e-20!180;CL:0000057!3.61e-13!75;CL:0000680!3.24e-10!57;CL:0000056!3.24e-10!57;CL:0000355!3.24e-10!57;CL:0000048!6.70e-10!430;CL:0000393!3.16e-09!60;CL:0000211!3.16e-09!60;CL:0000723!4.60e-09!436;CL:0000187!5.75e-09!54;CL:0000136!2.80e-08!15;CL:0000192!6.15e-08!42;CL:0000514!6.15e-08!42;CL:0000034!6.40e-08!444;CL:0002494!7.02e-08!16;CL:0000359!1.31e-07!32;CL:0002334!1.38e-07!12;CL:0000183!4.58e-07!59 | |ontology_enrichment_celltype=CL:0000055!3.32e-20!180;CL:0000057!3.61e-13!75;CL:0000680!3.24e-10!57;CL:0000056!3.24e-10!57;CL:0000355!3.24e-10!57;CL:0000048!6.70e-10!430;CL:0000393!3.16e-09!60;CL:0000211!3.16e-09!60;CL:0000723!4.60e-09!436;CL:0000187!5.75e-09!54;CL:0000136!2.80e-08!15;CL:0000192!6.15e-08!42;CL:0000514!6.15e-08!42;CL:0000034!6.40e-08!444;CL:0002494!7.02e-08!16;CL:0000359!1.31e-07!32;CL:0002334!1.38e-07!12;CL:0000183!4.58e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002334;2.97e-10;12!CL:0002494;6.66e-10;16!CL:0000136;9.75e-10;13!CL:0002620;5.04e-08;23!CL:0000499;1.50e-07;28!CL:0000359;5.87e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.11e-17,76;CL:0000048,1.14e-14,427;CL:0000723,8.15e-14,433;CL:0000034,1.00e-12,441;CL:0000136,6.28e-11,15;CL:0002334,1.19e-10,12;CL:0002494,4.31e-10,16;CL:0002620,1.85e-08,23;CL:0000680,4.29e-08,58;CL:0000056,4.29e-08,58;CL:0000355,4.29e-08,58;CL:0000499,7.83e-08,28;CL:0000393,2.83e-07,61;CL:0000211,2.83e-07,61;CL:0000134,4.89e-07,354;CL:0000359,7.73e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.85e-10!84;UBERON:0001134!9.93e-10!61;UBERON:0002036!9.93e-10!61;UBERON:0003082!9.93e-10!61;UBERON:0002385!1.22e-09!63;UBERON:0001015!1.22e-09!63;UBERON:0000383!1.22e-09!63;UBERON:0000948!2.52e-09!24;UBERON:0005498!2.52e-09!24;UBERON:0004140!2.52e-09!24;UBERON:0009881!2.52e-09!24;UBERON:0004141!2.52e-09!24;UBERON:0003084!2.52e-09!24;UBERON:0007005!2.52e-09!24;UBERON:0004139!2.52e-09!24;UBERON:0004291!2.52e-09!24;UBERON:0004290!2.65e-09!70;UBERON:0000914!3.16e-09!83;UBERON:0002329!3.16e-09!83;UBERON:0003077!3.16e-09!83;UBERON:0003059!3.16e-09!83;UBERON:0007282!3.16e-09!83;UBERON:0009618!3.16e-09!83;UBERON:0007285!3.16e-09!83;UBERON:0004573!5.38e-09!33;UBERON:0004571!5.38e-09!33;UBERON:0001637!1.01e-08!42;UBERON:0003509!1.01e-08!42;UBERON:0004572!1.01e-08!42;UBERON:0007100!1.62e-07!27;UBERON:0001981!3.07e-07!60;UBERON:0007500!3.07e-07!60;UBERON:0004537!3.07e-07!60;UBERON:0006965!3.07e-07!60;UBERON:0000926!7.08e-07!448;UBERON:0004120!7.08e-07!448;UBERON:0006603!7.08e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;7.97e-10;22!UBERON:0004573;1.74e-08;33!UBERON:0004571;1.74e-08;33!UBERON:0007100;6.30e-08;25!UBERON:0001637;2.40e-07;42!UBERON:0003509;2.40e-07;42!UBERON:0004572;2.40e-07;42!UBERON:0004457;4.85e-07;9!UBERON:0000042;4.85e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,1.15e-11,24;UBERON:0005498,1.15e-11,24;UBERON:0004140,1.15e-11,24;UBERON:0009881,1.15e-11,24;UBERON:0004141,1.15e-11,24;UBERON:0003084,1.15e-11,24;UBERON:0007005,1.15e-11,24;UBERON:0004139,1.15e-11,24;UBERON:0004291,1.15e-11,24;UBERON:0004872,8.47e-10,83;UBERON:0007100,1.40e-09,27;UBERON:0004573,2.53e-09,33;UBERON:0004571,2.53e-09,33;UBERON:0001637,1.18e-08,42;UBERON:0003509,1.18e-08,42;UBERON:0004572,1.18e-08,42;UBERON:0007524,1.16e-07,73;UBERON:0001134,1.60e-07,62;UBERON:0002036,1.60e-07,62;UBERON:0003082,1.60e-07,62;UBERON:0002329,1.65e-07,71;UBERON:0003059,1.65e-07,71;UBERON:0007282,1.65e-07,71;UBERON:0004290,1.65e-07,71;UBERON:0009618,1.65e-07,71;UBERON:0003077,2.95e-07,72;UBERON:0007285,2.95e-07,72;UBERON:0002199,3.15e-07,46;UBERON:0002416,3.15e-07,46;UBERON:0002385,5.50e-07,64;UBERON:0001015,5.50e-07,64;UBERON:0000383,5.50e-07,64 | |||
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| ||
|short_description=p2@NIPA2 | |short_description=p2@NIPA2 | ||
}} | }} |
Latest revision as of 23:36, 16 September 2015
Short description: | p2@NIPA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NIPA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 84bp_to_ENST00000539711_5end |
EntrezGene: | NIPA2 |
HGNC: | 17044 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.11e-17 | 76 |
multi fate stem cell | 1.14e-14 | 427 |
somatic stem cell | 8.15e-14 | 433 |
stem cell | 1.00e-12 | 441 |
fat cell | 6.28e-11 | 15 |
preadipocyte | 1.19e-10 | 12 |
cardiocyte | 4.31e-10 | 16 |
skin fibroblast | 1.85e-08 | 23 |
muscle precursor cell | 4.29e-08 | 58 |
myoblast | 4.29e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.29e-08 | 58 |
stromal cell | 7.83e-08 | 28 |
electrically responsive cell | 2.83e-07 | 61 |
electrically active cell | 2.83e-07 | 61 |
mesenchymal cell | 4.89e-07 | 354 |
vascular associated smooth muscle cell | 7.73e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
heart | 1.15e-11 | 24 |
primitive heart tube | 1.15e-11 | 24 |
primary heart field | 1.15e-11 | 24 |
anterior lateral plate mesoderm | 1.15e-11 | 24 |
heart tube | 1.15e-11 | 24 |
heart primordium | 1.15e-11 | 24 |
cardiac mesoderm | 1.15e-11 | 24 |
cardiogenic plate | 1.15e-11 | 24 |
heart rudiment | 1.15e-11 | 24 |
splanchnic layer of lateral plate mesoderm | 8.47e-10 | 83 |
primary circulatory organ | 1.40e-09 | 27 |
systemic artery | 2.53e-09 | 33 |
systemic arterial system | 2.53e-09 | 33 |
artery | 1.18e-08 | 42 |
arterial blood vessel | 1.18e-08 | 42 |
arterial system | 1.18e-08 | 42 |
dense mesenchyme tissue | 1.16e-07 | 73 |
skeletal muscle tissue | 1.60e-07 | 62 |
striated muscle tissue | 1.60e-07 | 62 |
myotome | 1.60e-07 | 62 |
somite | 1.65e-07 | 71 |
presomitic mesoderm | 1.65e-07 | 71 |
presumptive segmental plate | 1.65e-07 | 71 |
dermomyotome | 1.65e-07 | 71 |
trunk paraxial mesoderm | 1.65e-07 | 71 |
paraxial mesoderm | 2.95e-07 | 72 |
presumptive paraxial mesoderm | 2.95e-07 | 72 |
integument | 3.15e-07 | 46 |
integumental system | 3.15e-07 | 46 |
muscle tissue | 5.50e-07 | 64 |
musculature | 5.50e-07 | 64 |
musculature of body | 5.50e-07 | 64 |