FFCP PHASE1:Hg19::chr11:17035837..17035872,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=8385 | |HGNC=8385 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=292bp_to_ENST00000530490_5end | |association_with_transcript=292bp_to_ENST00000530490_5end | ||
|cluster_id=chr11:17035837..17035872,+ | |||
|description=CAGE_peak_2_at_OR7E14P_5end | |description=CAGE_peak_2_at_OR7E14P_5end | ||
|id=chr11:17035837..17035872,+ | |id=chr11:17035837..17035872,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.45e-11!254 | |ontology_enrichment_celltype=CL:0000066!5.45e-11!254 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.33e-12;10!CL:1000494;1.33e-12;10!CL:1000449;1.58e-09;15!CL:1000497;4.09e-08;17!CL:0002518;4.09e-08;17 | |ontology_enrichment_celltype_v019=CL:1000507;1.33e-12;10!CL:1000494;1.33e-12;10!CL:1000449;1.58e-09;15!CL:1000497;4.09e-08;17!CL:0002518;4.09e-08;17 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.03e-12,10;CL:1000494,1.03e-12,10;CL:0000066,2.98e-10,253;CL:1000449,1.51e-09,15;CL:1000497,3.95e-08,17;CL:0002518,3.95e-08,17 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.52e-09;29!UBERON:0006595;1.03e-08;86 | |ontology_enrichment_development_v019=UBERON:0008947;1.52e-09;29!UBERON:0006595;1.03e-08;86 | ||
|ontology_enrichment_disease=DOID:305!9.92e-27!106;DOID:0050687!1.56e-22!143;DOID:299!5.63e-12!25;DOID:162!4.48e-11!235;DOID:14566!3.47e-10!239 | |ontology_enrichment_disease=DOID:305!9.92e-27!106;DOID:0050687!1.56e-22!143;DOID:299!5.63e-12!25;DOID:162!4.48e-11!235;DOID:14566!3.47e-10!239 | ||
|ontology_enrichment_disease_v019=DOID:299;4.46e-11;25!DOID:3119;9.02e-08;14!DOID:5093;1.27e-07;4!DOID:1612;1.27e-07;4 | |ontology_enrichment_disease_v019=DOID:299;4.46e-11;25!DOID:3119;9.02e-08;14!DOID:5093;1.27e-07;4!DOID:1612;1.27e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:305,2.35e-20,106;DOID:0050687,4.03e-18,143;DOID:299,2.37e-11,25;DOID:162,1.59e-09,235;DOID:14566,5.22e-09,239;DOID:3119,3.60e-08,14;DOID:5093,1.62e-07,4;DOID:1612,1.62e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.59e-20!94;UBERON:0001016!1.59e-20!94;UBERON:0005743!5.67e-20!86;UBERON:0003075!3.58e-18!86;UBERON:0007284!3.58e-18!86;UBERON:0002346!7.82e-18!90;UBERON:0007023!1.61e-17!115;UBERON:0001017!1.82e-17!82;UBERON:0001049!9.34e-17!57;UBERON:0005068!9.34e-17!57;UBERON:0006241!9.34e-17!57;UBERON:0007135!9.34e-17!57;UBERON:0000481!3.56e-16!347;UBERON:0000955!1.66e-15!69;UBERON:0006238!1.66e-15!69;UBERON:0002616!1.16e-14!59;UBERON:0003056!5.50e-14!61;UBERON:0000064!9.18e-14!219;UBERON:0003080!1.57e-12!42;UBERON:0000153!1.80e-12!129;UBERON:0007811!1.80e-12!129;UBERON:0000033!2.42e-12!123;UBERON:0002780!5.27e-12!41;UBERON:0001890!5.27e-12!41;UBERON:0006240!5.27e-12!41;UBERON:0000924!5.72e-12!173;UBERON:0006601!5.72e-12!173;UBERON:0004121!5.82e-12!169;UBERON:0000062!1.20e-11!511;UBERON:0004921!1.27e-11!129;UBERON:0004185!1.27e-11!129;UBERON:0000477!2.07e-10!286;UBERON:0001007!3.24e-10!155;UBERON:0001555!3.24e-10!155;UBERON:0007026!3.24e-10!155;UBERON:0001893!5.11e-10!34;UBERON:0000063!5.97e-10!97;UBERON:0002791!9.39e-10!33;UBERON:0000922!9.54e-10!612;UBERON:0002020!1.37e-09!34;UBERON:0003528!1.37e-09!34;UBERON:0000475!1.51e-09!365;UBERON:0000077!2.79e-09!130;UBERON:0004119!2.80e-09!169;UBERON:0000925!2.80e-09!169;UBERON:0006595!2.80e-09!169;UBERON:0001869!3.66e-09!32;UBERON:0005177!3.93e-09!107;UBERON:0001041!4.03e-09!98;UBERON:0002050!3.74e-08!605;UBERON:0005423!3.74e-08!605;UBERON:0004111!3.77e-08!241;UBERON:0000468!6.41e-08!659;UBERON:0000923!6.45e-08!604;UBERON:0005291!6.45e-08!604;UBERON:0006598!6.45e-08!604;UBERON:0002532!6.45e-08!604;UBERON:0008947!1.05e-07!38;UBERON:0003258!1.05e-07!38;UBERON:0000956!1.60e-07!25;UBERON:0000203!1.60e-07!25;UBERON:0000025!1.66e-07!194;UBERON:0000065!2.43e-07!53;UBERON:0001048!2.96e-07!168;UBERON:0001737!6.89e-07!9;UBERON:0000483!9.25e-07!309 | |ontology_enrichment_uberon=UBERON:0000073!1.59e-20!94;UBERON:0001016!1.59e-20!94;UBERON:0005743!5.67e-20!86;UBERON:0003075!3.58e-18!86;UBERON:0007284!3.58e-18!86;UBERON:0002346!7.82e-18!90;UBERON:0007023!1.61e-17!115;UBERON:0001017!1.82e-17!82;UBERON:0001049!9.34e-17!57;UBERON:0005068!9.34e-17!57;UBERON:0006241!9.34e-17!57;UBERON:0007135!9.34e-17!57;UBERON:0000481!3.56e-16!347;UBERON:0000955!1.66e-15!69;UBERON:0006238!1.66e-15!69;UBERON:0002616!1.16e-14!59;UBERON:0003056!5.50e-14!61;UBERON:0000064!9.18e-14!219;UBERON:0003080!1.57e-12!42;UBERON:0000153!1.80e-12!129;UBERON:0007811!1.80e-12!129;UBERON:0000033!2.42e-12!123;UBERON:0002780!5.27e-12!41;UBERON:0001890!5.27e-12!41;UBERON:0006240!5.27e-12!41;UBERON:0000924!5.72e-12!173;UBERON:0006601!5.72e-12!173;UBERON:0004121!5.82e-12!169;UBERON:0000062!1.20e-11!511;UBERON:0004921!1.27e-11!129;UBERON:0004185!1.27e-11!129;UBERON:0000477!2.07e-10!286;UBERON:0001007!3.24e-10!155;UBERON:0001555!3.24e-10!155;UBERON:0007026!3.24e-10!155;UBERON:0001893!5.11e-10!34;UBERON:0000063!5.97e-10!97;UBERON:0002791!9.39e-10!33;UBERON:0000922!9.54e-10!612;UBERON:0002020!1.37e-09!34;UBERON:0003528!1.37e-09!34;UBERON:0000475!1.51e-09!365;UBERON:0000077!2.79e-09!130;UBERON:0004119!2.80e-09!169;UBERON:0000925!2.80e-09!169;UBERON:0006595!2.80e-09!169;UBERON:0001869!3.66e-09!32;UBERON:0005177!3.93e-09!107;UBERON:0001041!4.03e-09!98;UBERON:0002050!3.74e-08!605;UBERON:0005423!3.74e-08!605;UBERON:0004111!3.77e-08!241;UBERON:0000468!6.41e-08!659;UBERON:0000923!6.45e-08!604;UBERON:0005291!6.45e-08!604;UBERON:0006598!6.45e-08!604;UBERON:0002532!6.45e-08!604;UBERON:0008947!1.05e-07!38;UBERON:0003258!1.05e-07!38;UBERON:0000956!1.60e-07!25;UBERON:0000203!1.60e-07!25;UBERON:0000025!1.66e-07!194;UBERON:0000065!2.43e-07!53;UBERON:0001048!2.96e-07!168;UBERON:0001737!6.89e-07!9;UBERON:0000483!9.25e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.33e-12;10!UBERON:0009773;1.33e-12;10!UBERON:0001231;1.33e-12;10!UBERON:0004810;1.33e-12;10!UBERON:0000489;8.94e-11;29!UBERON:0002113;9.41e-11;24!UBERON:0011143;9.41e-11;24!UBERON:0006555;1.58e-09;15!UBERON:0004819;1.58e-09;15!UBERON:0001285;1.58e-09;15!UBERON:0007684;1.58e-09;15!UBERON:0000966;4.70e-09;5!UBERON:0005388;4.70e-09;5!UBERON:0001802;4.70e-09;5!UBERON:0006554;5.28e-09;30!UBERON:0001008;5.28e-09;30!UBERON:0001737;1.87e-07;9!UBERON:0001557;1.87e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0004211;1.33e-12;10!UBERON:0009773;1.33e-12;10!UBERON:0001231;1.33e-12;10!UBERON:0004810;1.33e-12;10!UBERON:0000489;8.94e-11;29!UBERON:0002113;9.41e-11;24!UBERON:0011143;9.41e-11;24!UBERON:0006555;1.58e-09;15!UBERON:0004819;1.58e-09;15!UBERON:0001285;1.58e-09;15!UBERON:0007684;1.58e-09;15!UBERON:0000966;4.70e-09;5!UBERON:0005388;4.70e-09;5!UBERON:0001802;4.70e-09;5!UBERON:0006554;5.28e-09;30!UBERON:0001008;5.28e-09;30!UBERON:0001737;1.87e-07;9!UBERON:0001557;1.87e-07;9 | ||
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| ||
|short_description=p2@OR7E14P | |short_description=p2@OR7E14P | ||
}} | }} |
Latest revision as of 23:46, 16 September 2015
Short description: | p2@OR7E14P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_OR7E14P_5end |
Coexpression cluster: | NA |
Association with transcript: | 292bp_to_ENST00000530490_5end |
EntrezGene: | NA |
HGNC: | 8385 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.03e-12 | 10 |
nephron tubule epithelial cell | 1.03e-12 | 10 |
epithelial cell | 2.98e-10 | 253 |
epithelial cell of nephron | 1.51e-09 | 15 |
kidney cell | 3.95e-08 | 17 |
kidney epithelial cell | 3.95e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 3.98e-13 | 223 |
nephron tubule epithelium | 1.03e-12 | 10 |
cavitated compound organ | 2.23e-11 | 31 |
kidney | 3.18e-11 | 26 |
kidney mesenchyme | 3.18e-11 | 26 |
upper urinary tract | 3.18e-11 | 26 |
kidney rudiment | 3.18e-11 | 26 |
kidney field | 3.18e-11 | 26 |
trunk region element | 3.46e-11 | 101 |
subdivision of trunk | 4.14e-10 | 112 |
retina | 4.63e-10 | 6 |
photoreceptor array | 4.63e-10 | 6 |
posterior segment of eyeball | 4.63e-10 | 6 |
subdivision of digestive tract | 5.83e-10 | 118 |
nephron epithelium | 1.51e-09 | 15 |
renal tubule | 1.51e-09 | 15 |
nephron tubule | 1.51e-09 | 15 |
nephron | 1.51e-09 | 15 |
uriniferous tubule | 1.51e-09 | 15 |
nephrogenic mesenchyme | 1.51e-09 | 15 |
foregut | 2.66e-09 | 87 |
abdomen element | 7.51e-09 | 54 |
abdominal segment element | 7.51e-09 | 54 |
excretory tube | 8.59e-09 | 16 |
kidney epithelium | 8.59e-09 | 16 |
digestive system | 1.82e-08 | 145 |
digestive tract | 1.82e-08 | 145 |
primitive gut | 1.82e-08 | 145 |
larynx | 1.15e-07 | 9 |
respiratory primordium | 1.78e-07 | 38 |
endoderm of foregut | 1.78e-07 | 38 |
abdominal segment of trunk | 2.20e-07 | 60 |
abdomen | 2.20e-07 | 60 |
layer of retina | 7.46e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.35e-20 | 106 |
cell type cancer | 4.03e-18 | 143 |
adenocarcinoma | 2.37e-11 | 25 |
cancer | 1.59e-09 | 235 |
disease of cellular proliferation | 5.22e-09 | 239 |
gastrointestinal system cancer | 3.60e-08 | 14 |
thoracic cancer | 1.62e-07 | 4 |
breast cancer | 1.62e-07 | 4 |