FFCP PHASE1:Hg19::chr1:151319710..151319774,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5993 | |EntrezGene=5993 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9986 | |HGNC=9986 | ||
|TSSclassifier=strong | |||
|UniProt=P48382,F6X8N2,F2Z2G0,B7Z848 | |UniProt=P48382,F6X8N2,F2Z2G0,B7Z848 | ||
|association_with_transcript=0bp_to_ENST00000290524,ENST00000437327,ENST00000444392,ENST00000452513,ENST00000478564,ENST00000494217,NM_000449,NM_001025603,uc001exv.1,uc001exw.1,uc009wmr.1,uc010pcx.1_5end | |association_with_transcript=0bp_to_ENST00000290524,ENST00000437327,ENST00000444392,ENST00000452513,ENST00000478564,ENST00000494217,NM_000449,NM_001025603,uc001exv.1,uc001exw.1,uc009wmr.1,uc010pcx.1_5end | ||
|cluster_id=chr1:151319710..151319774,- | |||
|description=CAGE_peak_1_at_RFX5_5end | |description=CAGE_peak_1_at_RFX5_5end | ||
|id=chr1:151319710..151319774,- | |id=chr1:151319710..151319774,- | ||
|ontology_enrichment_celltype=CL:0000738!1.38e-33!140;CL:0000037!5.16e-33!172;CL:0000566!5.16e-33!172;CL:0000988!5.39e-32!182;CL:0002032!5.94e-30!165;CL:0000837!5.94e-30!165;CL:0002087!5.99e-28!119;CL:0002031!7.01e-28!124;CL:0000542!1.66e-23!53;CL:0000051!1.66e-23!53;CL:0000838!7.17e-23!52;CL:0000945!1.03e-12!24;CL:0000826!1.03e-12!24;CL:0000763!3.28e-10!112;CL:0000049!3.28e-10!112;CL:0000084!4.76e-10!25;CL:0000827!4.76e-10!25;CL:0000236!7.35e-10!14;CL:0000766!5.77e-09!76;CL:0000557!5.29e-08!71;CL:0000839!6.73e-08!70;CL:0000791!2.25e-07!18;CL:0000789!2.25e-07!18;CL:0002420!2.25e-07!18;CL:0002419!2.25e-07!18;CL:0000790!2.25e-07!18;CL:0002009!2.48e-07!65;CL:0002194!5.59e-07!63;CL:0000576!5.59e-07!63;CL:0000040!5.59e-07!63;CL:0000559!5.59e-07!63 | |ontology_enrichment_celltype=CL:0000738!1.38e-33!140;CL:0000037!5.16e-33!172;CL:0000566!5.16e-33!172;CL:0000988!5.39e-32!182;CL:0002032!5.94e-30!165;CL:0000837!5.94e-30!165;CL:0002087!5.99e-28!119;CL:0002031!7.01e-28!124;CL:0000542!1.66e-23!53;CL:0000051!1.66e-23!53;CL:0000838!7.17e-23!52;CL:0000945!1.03e-12!24;CL:0000826!1.03e-12!24;CL:0000763!3.28e-10!112;CL:0000049!3.28e-10!112;CL:0000084!4.76e-10!25;CL:0000827!4.76e-10!25;CL:0000236!7.35e-10!14;CL:0000766!5.77e-09!76;CL:0000557!5.29e-08!71;CL:0000839!6.73e-08!70;CL:0000791!2.25e-07!18;CL:0000789!2.25e-07!18;CL:0002420!2.25e-07!18;CL:0002419!2.25e-07!18;CL:0000790!2.25e-07!18;CL:0002009!2.48e-07!65;CL:0002194!5.59e-07!63;CL:0000576!5.59e-07!63;CL:0000040!5.59e-07!63;CL:0000559!5.59e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000542;2.91e-14;53!CL:0000945;1.12e-12;24!CL:0000084;4.76e-10;25!CL:0000236;1.15e-09;13!CL:0002087;4.05e-08;104!CL:0000791;1.95e-07;18!CL:0000789;1.95e-07;18!CL:0002419;1.95e-07;18!CL:0000738;2.01e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.22e-33,136;CL:0000037,3.45e-32,168;CL:0000988,4.67e-31,177;CL:0002032,3.77e-29,161;CL:0000837,3.77e-29,161;CL:0002087,3.18e-27,115;CL:0002031,3.82e-27,120;CL:0000542,1.66e-23,53;CL:0000051,1.66e-23,53;CL:0000838,7.17e-23,52;CL:0000945,1.03e-12,24;CL:0000826,1.03e-12,24;CL:0000084,4.76e-10,25;CL:0000827,4.76e-10,25;CL:0000236,7.35e-10,14;CL:0000763,1.31e-09,108;CL:0000049,1.31e-09,108;CL:0000766,2.31e-08,72;CL:0000557,2.06e-07,67;CL:0000791,2.25e-07,18;CL:0000789,2.25e-07,18;CL:0002420,2.25e-07,18;CL:0002419,2.25e-07,18;CL:0000790,2.25e-07,18;CL:0000839,2.61e-07,66;CL:0002009,9.48e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000051;2.91e-14;53!CL:0000790;1.95e-07;18 | |||
|ontology_enrichment_disease=DOID:0060058!8.14e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;7.56e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,8.14e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.29e-13!102;UBERON:0003061!2.29e-13!102;UBERON:0002193!8.93e-13!112;UBERON:0000178!1.87e-07!15;UBERON:0000179!1.87e-07!15;UBERON:0000463!1.87e-07!15;UBERON:0001474!6.39e-07!86;UBERON:0002371!8.47e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.85e-07;15!UBERON:0000179;1.85e-07;15!UBERON:0000463;1.85e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.03e-12,98;UBERON:0003061,1.03e-12,98;UBERON:0002193,3.93e-12,108;UBERON:0002405,1.18e-07,93;UBERON:0000178,1.87e-07,15;UBERON:0000179,1.87e-07,15;UBERON:0000463,1.87e-07,15 | |||
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| ||
|short_description=p1@RFX5 | |short_description=p1@RFX5 | ||
}} | }} |
Latest revision as of 00:56, 17 September 2015
Short description: | p1@RFX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RFX5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000290524, ENST00000437327, ENST00000444392, ENST00000452513, ENST00000478564, ENST00000494217, NM_000449, NM_001025603, uc001exv.1, uc001exw.1, uc009wmr.1, uc010pcx.1_5end |
EntrezGene: | RFX5 |
HGNC: | 9986 |
UniProt: | P48382F6X8N2F2Z2G0B7Z848 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.22e-33 | 136 |
hematopoietic stem cell | 3.45e-32 | 168 |
hematopoietic cell | 4.67e-31 | 177 |
hematopoietic oligopotent progenitor cell | 3.77e-29 | 161 |
hematopoietic multipotent progenitor cell | 3.77e-29 | 161 |
nongranular leukocyte | 3.18e-27 | 115 |
hematopoietic lineage restricted progenitor cell | 3.82e-27 | 120 |
lymphocyte | 1.66e-23 | 53 |
common lymphoid progenitor | 1.66e-23 | 53 |
lymphoid lineage restricted progenitor cell | 7.17e-23 | 52 |
lymphocyte of B lineage | 1.03e-12 | 24 |
pro-B cell | 1.03e-12 | 24 |
T cell | 4.76e-10 | 25 |
pro-T cell | 4.76e-10 | 25 |
B cell | 7.35e-10 | 14 |
myeloid cell | 1.31e-09 | 108 |
common myeloid progenitor | 1.31e-09 | 108 |
myeloid leukocyte | 2.31e-08 | 72 |
granulocyte monocyte progenitor cell | 2.06e-07 | 67 |
mature alpha-beta T cell | 2.25e-07 | 18 |
alpha-beta T cell | 2.25e-07 | 18 |
immature T cell | 2.25e-07 | 18 |
mature T cell | 2.25e-07 | 18 |
immature alpha-beta T cell | 2.25e-07 | 18 |
myeloid lineage restricted progenitor cell | 2.61e-07 | 66 |
macrophage dendritic cell progenitor | 9.48e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.03e-12 | 98 |
blood island | 1.03e-12 | 98 |
hemolymphoid system | 3.93e-12 | 108 |
immune system | 1.18e-07 | 93 |
blood | 1.87e-07 | 15 |
haemolymphatic fluid | 1.87e-07 | 15 |
organism substance | 1.87e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 8.14e-07 | 10 |