FFCP PHASE1:Hg19::chr16:56666424..56666452,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4499 | |EntrezGene=4499 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14296 | |HGNC=14296 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N339 | |UniProt=Q8N339 | ||
|association_with_transcript=-81bp_to_ENST00000379818,NM_176870,uc002ejn.2_5end | |association_with_transcript=-81bp_to_ENST00000379818,NM_176870,uc002ejn.2_5end | ||
|cluster_id=chr16:56666424..56666452,+ | |||
|coexpression_cluster_id=C3574 | |||
|description=CAGE_peak_6_at_MT1M_5end | |description=CAGE_peak_6_at_MT1M_5end | ||
|id=chr16:56666424..56666452,+ | |id=chr16:56666424..56666452,+ | ||
|ontology_enrichment_celltype=CL:0000136!3.98e-09!15 | |ontology_enrichment_celltype=CL:0000136!3.98e-09!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;5.22e-14;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.83e-14,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.15e-38!115;UBERON:0003075!2.50e-22!86;UBERON:0007284!2.50e-22!86;UBERON:0001049!5.11e-22!57;UBERON:0005068!5.11e-22!57;UBERON:0006241!5.11e-22!57;UBERON:0007135!5.11e-22!57;UBERON:0002346!2.41e-20!90;UBERON:0002616!6.12e-18!59;UBERON:0000475!2.74e-16!365;UBERON:0004111!1.29e-15!241;UBERON:0003080!1.61e-15!42;UBERON:0000153!4.49e-15!129;UBERON:0007811!4.49e-15!129;UBERON:0000033!4.97e-15!123;UBERON:0000477!5.32e-15!286;UBERON:0000119!8.05e-15!312;UBERON:0002780!1.10e-14!41;UBERON:0001890!1.10e-14!41;UBERON:0006240!1.10e-14!41;UBERON:0000483!1.22e-14!309;UBERON:0002020!2.10e-14!34;UBERON:0003528!2.10e-14!34;UBERON:0005743!8.91e-14!86;UBERON:0001893!1.03e-13!34;UBERON:0003056!1.06e-13!61;UBERON:0000025!1.20e-13!194;UBERON:0000955!1.49e-13!69;UBERON:0006238!1.49e-13!69;UBERON:0002791!1.97e-13!33;UBERON:0000073!4.40e-13!94;UBERON:0001016!4.40e-13!94;UBERON:0001017!5.32e-13!82;UBERON:0001869!9.00e-13!32;UBERON:0000481!7.02e-12!347;UBERON:0000064!1.91e-11!219;UBERON:0004121!1.43e-10!169;UBERON:0000924!8.10e-10!173;UBERON:0006601!8.10e-10!173;UBERON:0002619!1.15e-09!22;UBERON:0000467!4.89e-09!625;UBERON:0000468!5.61e-09!659;UBERON:0000480!6.25e-09!626;UBERON:0000956!1.44e-08!25;UBERON:0000203!1.44e-08!25;UBERON:0001950!2.05e-08!20;UBERON:0002308!4.72e-08!9;UBERON:0000125!4.72e-08!9;UBERON:0002420!6.14e-08!9;UBERON:0007245!6.14e-08!9;UBERON:0010009!6.14e-08!9;UBERON:0010011!6.14e-08!9;UBERON:0000454!6.14e-08!9;UBERON:0003076!8.56e-08!15;UBERON:0003057!8.56e-08!15;UBERON:0000479!1.28e-07!787;UBERON:0002298!3.07e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;1.06e-11;9!UBERON:0002308;1.06e-11;9!UBERON:0002420;3.37e-11;9!UBERON:0007245;3.37e-11;9!UBERON:0010009;3.37e-11;9!UBERON:0010011;3.37e-11;9!UBERON:0000454;3.37e-11;9!UBERON:0009663;6.71e-08;7!UBERON:0001013;1.47e-07;14!UBERON:0005383;2.22e-07;3!UBERON:0005382;2.22e-07;3!UBERON:0007023;3.62e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.21e-21,114;UBERON:0003075,5.44e-13,82;UBERON:0007284,5.44e-13,82;UBERON:0001049,3.71e-12,56;UBERON:0005068,3.71e-12,56;UBERON:0006241,3.71e-12,56;UBERON:0007135,3.71e-12,56;UBERON:0002346,4.60e-12,86;UBERON:0000125,6.01e-12,9;UBERON:0002308,6.01e-12,9;UBERON:0002420,1.00e-11,9;UBERON:0007245,1.00e-11,9;UBERON:0010009,1.00e-11,9;UBERON:0010011,1.00e-11,9;UBERON:0000454,1.00e-11,9;UBERON:0000073,2.14e-10,53;UBERON:0002616,2.14e-10,53;UBERON:0010314,4.43e-09,132;UBERON:0010371,8.15e-09,104;UBERON:0002780,1.19e-08,41;UBERON:0001890,1.19e-08,41;UBERON:0003080,1.19e-08,41;UBERON:0006240,1.19e-08,41;UBERON:0009663,3.22e-08,7;UBERON:0003528,4.45e-08,34;UBERON:0002020,4.45e-08,34;UBERON:0000025,1.17e-07,192;UBERON:0005383,1.17e-07,3;UBERON:0005382,1.17e-07,3;UBERON:0001013,1.33e-07,14;UBERON:0003056,1.67e-07,61;UBERON:0000955,5.70e-07,68;UBERON:0006238,5.70e-07,68;UBERON:0001017,9.80e-07,81 | |||
|phase1_expression=0.363356758541113,1.07050261945492,0.704772020479856,1.0007329835313,2.68176656656373,2.61701557230111,0,0,5.74608382039645,0.245733936501509,0,0,0,0,0,0,0,0,0,0.246242116153576,0.816002764977012,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0.579386075843295,0,0.486634870302636,0,0,0,0.261958150995425,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,1.38856200643038,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0.81014194788176,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13842229158782,0.117434498643765,0,0.280901613404497,0.61246251376468,0.245668634623536,2.06651562351531,1.18800285728205,0.494533858557114,0.910161361938026,0.718618141816238,0,0,0,1.31693286264251,0.612975591598039,0.150238058906597,0.113432183160021,0,0,0,0,0.92747276314595,0,0.37223371266318,0,0.876933046450788,0,0.184099797284599,0.323292113637624,0,0,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,1.77236972004421,0,0,0,0.109750285408626,0,0,0,0,4.15973914111831,0,0.115930404975077,0.117408694235822,0.577465791044295,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,1.15295962733569,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,21.4593867511129,1.690605505112,0,0,0,0,0.799266537048298,0,0,0,0.977208552881205,0.355391948742546,1.58390374586686,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,2.02693829334611,3.49309748335652,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0,0,0,2.27407504055985,5.17365356462525,0,0,0.0868836144680828,0,0,0,0,0,0,3.32870879020994,0.604780586659361,0,0.153461973288062,0.561320188866147,0.384417447767103,0,0.482561763430822,2.96836132889982,0.925258162815933,0.887808626565635,1.06765302817952,0,1.16210378459959,0,0,0,0,0,0.131124414959424,1.35359883872224,0.15403067420883,1.56869953835371,1.46139224653261,0.316654886678627,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0.256450125116389,0,0.325378394664303,0.824328093181778,0,0.082509499920588,0,0,0,0.193341436584244,0.462145851343933,0.460511024178389,0,0.214840489736547,0.290033387828457,0.255679882248303,0,0,0.384380134730212,0,0,0,0.31481234683064,2.0911118104818,0,0,0.869932992075073,0,0,0,0.316379424718726,0,0.255897791311334,0,1.27281299170375,0,0,0,0,0.202182481573316,0,0.421258456238981,0,1.46228093778771,0,0,0,2.26016233240486,0.551365343546124,0,0,0.578775534266688,1.31178950409327,0,0,0.281695602532241,0,0.196498082026242,0,0.354761064070598,1.89996871767898,0.658589785919804,0.75894634753143,0.349934720244983,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68826173670061,0,0,0.568272293612826,0,0,0,1.9882952955326,1.40669416410513,0,0,0,2.19172787076177,0.552567831062295,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0.74214478529481,0,0,0,12.3249927823915,0,0,0,0,0,0,1.77148277162768,1.80894657938112,0,0.552896299656123,0.886642856860642,0.87754158861589,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23840590304675,0.611030144933625,0,0,0,0.741412462787447,0.802577647298789,0,0,0,0.242780379534093,0.394584402849391,0,0,0.947798694427319,0,0,0,0,0,0,0,0,0.520679215005393,0,0,0.873633341210151,2.57979048707425,0,0,0,0.581934098930517,0,0.451961481561065,0,0,0.379864775735272,0,0,0.640358984218058,0,0,0,0,0,0,0.235694034616795,0,0,0,0,2.40168115483916,1.9166753044879,0,0,0,2.51354161145029,0.687481272035051,5.0251111720377,0.599037001496973,3.004582336956,1.56220020209311,0.403100834920358,0,0,0,0,0,0,0,4.77137813885582,0.544813624446302,0,0,0,0,0,0.364497339948148,0,1.49730843868477,0.419636705079985,0,0,0,0.714695326373367,4.63464379255802,0,0,0,0,0,0,0,0,2.34483573884932,2.65013777824443,2.06852730178481,2.24795422962573,0,0,1.81538601365081,2.82967749179399,0.828478110694391,2.48083010905975,0,0,0,7.07223144380316,12.534494701135,7.04594826555962,6.22957998348628,0,0.886068179966986,0.732157589411779,1.001527445652,4.0138643698305,0.998361463831671,1.1177352529449,0,0,0,0,0,0,0,0,0,0,0.757612021100357,0.251567901752575,1.77962244319307,0.228840068396924,0,0,0.295710299979268,0.159296767163702,0,0.310525913752519,0,0,0.521745061811734,0.300515217994437,0,0,0,0,0,0,0.400027764663154,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0.132864840313363,0,0,0,0,0,0,0,0.567515953566836,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.321146125482298,2.8339315265117,0.957803154342908,0.41023272848151,0,0.207471757392654,0.161475645631851,2.85538840518309,0,0,0.183428598521679,0,0,0,0,0.601682626794058,0,0,0,0,0,0.270150338473579,0.781078098613847,0.620060389503552,0.25366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| ||
|short_description=p6@MT1M | |short_description=p6@MT1M | ||
}} | }} |
Latest revision as of 02:02, 17 September 2015
Short description: | p6@MT1M |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MT1M_5end |
Coexpression cluster: | C3574_Mesenchymal_mature_breast_skeletal_medulla_heart_hippocampus |
Association with transcript: | -81bp_to_ENST00000379818, NM_176870, uc002ejn.2_5end |
EntrezGene: | MT1M |
HGNC: | 14296 |
UniProt: | Q8N339 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.83e-14 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.21e-21 | 114 |
neural plate | 5.44e-13 | 82 |
presumptive neural plate | 5.44e-13 | 82 |
neural tube | 3.71e-12 | 56 |
neural rod | 3.71e-12 | 56 |
future spinal cord | 3.71e-12 | 56 |
neural keel | 3.71e-12 | 56 |
neurectoderm | 4.60e-12 | 86 |
neural nucleus | 6.01e-12 | 9 |
nucleus of brain | 6.01e-12 | 9 |
basal ganglion | 1.00e-11 | 9 |
nuclear complex of neuraxis | 1.00e-11 | 9 |
aggregate regional part of brain | 1.00e-11 | 9 |
collection of basal ganglia | 1.00e-11 | 9 |
cerebral subcortex | 1.00e-11 | 9 |
regional part of nervous system | 2.14e-10 | 53 |
regional part of brain | 2.14e-10 | 53 |
structure with developmental contribution from neural crest | 4.43e-09 | 132 |
ecto-epithelium | 8.15e-09 | 104 |
regional part of forebrain | 1.19e-08 | 41 |
forebrain | 1.19e-08 | 41 |
anterior neural tube | 1.19e-08 | 41 |
future forebrain | 1.19e-08 | 41 |
telencephalic nucleus | 3.22e-08 | 7 |
brain grey matter | 4.45e-08 | 34 |
gray matter | 4.45e-08 | 34 |
tube | 1.17e-07 | 192 |
caudate-putamen | 1.17e-07 | 3 |
dorsal striatum | 1.17e-07 | 3 |
adipose tissue | 1.33e-07 | 14 |
pre-chordal neural plate | 1.67e-07 | 61 |
brain | 5.70e-07 | 68 |
future brain | 5.70e-07 | 68 |
central nervous system | 9.80e-07 | 81 |