FFCP PHASE1:Hg19::chr20:54987220..54987233,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57091 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15878 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NQ75,B4DII4 | |||
|association_with_transcript=52bp_to_ENST00000360314,NM_001164116,uc002xxp.2_5end | |||
|cluster_id=chr20:54987220..54987233,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_6_at_CASS4_5end | |||
|id=chr20:54987220..54987233,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.99e-35!112;CL:0000049!1.99e-35!112;CL:0000766!1.62e-33!76;CL:0000037!6.80e-29!172;CL:0000566!6.80e-29!172;CL:0000557!1.93e-28!71;CL:0000738!4.37e-28!140;CL:0002032!1.01e-27!165;CL:0000837!1.01e-27!165;CL:0000988!1.95e-27!182;CL:0000839!5.34e-26!70;CL:0002009!6.44e-26!65;CL:0002194!4.10e-24!63;CL:0000576!4.10e-24!63;CL:0000040!4.10e-24!63;CL:0000559!4.10e-24!63;CL:0002031!1.86e-19!124;CL:0002057!8.71e-19!42;CL:0002087!2.55e-17!119;CL:0000860!7.88e-17!45;CL:0000990!6.35e-10!8;CL:0000134!6.74e-10!358;CL:0002320!1.44e-09!365;CL:0000451!1.97e-09!10;CL:0000094!5.53e-08!8;CL:0000840!9.61e-08!5;CL:0001029!9.61e-08!5;CL:0000219!3.88e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000775;6.99e-15;3!CL:0000094;1.27e-14;8!CL:0000860;4.41e-14;33!CL:0002057;4.41e-14;33!CL:0000473;1.37e-13;39!CL:0000234;1.37e-13;39!CL:0000840;1.01e-11;5!CL:0000766;1.22e-10;69!CL:0000081;1.55e-10;11!CL:0000771;1.88e-10;2!CL:0000097;2.27e-08;5!CL:0000763;4.36e-08;100!CL:0000990;7.77e-08;8!CL:0000576;1.71e-07;48!CL:0000738;9.64e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.60e-31,72;CL:0000763,2.33e-24,108;CL:0000049,2.33e-24,108;CL:0000557,2.47e-22,67;CL:0000839,1.71e-20,66;CL:0002009,1.15e-17,61;CL:0000738,1.38e-16,136;CL:0002194,2.71e-16,59;CL:0000576,2.71e-16,59;CL:0000040,2.71e-16,59;CL:0000559,2.71e-16,59;CL:0002032,1.35e-15,161;CL:0000837,1.35e-15,161;CL:0000775,6.87e-15,3;CL:0000037,1.13e-14,168;CL:0000094,1.25e-14,8;CL:0000473,5.67e-14,48;CL:0000234,5.67e-14,48;CL:0000988,1.35e-13,177;CL:0000860,9.11e-12,42;CL:0002057,9.11e-12,42;CL:0002031,1.03e-11,120;CL:0000840,1.46e-11,5;CL:0001029,1.46e-11,5;CL:0000081,1.52e-10,11;CL:0000771,1.84e-10,2;CL:0000097,1.65e-08,5;CL:0002028,1.65e-08,5;CL:0000990,9.86e-08,8;CL:0002087,1.16e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.19e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.33e-34!102;UBERON:0003061!2.33e-34!102;UBERON:0002193!9.11e-32!112;UBERON:0002371!2.56e-23!80;UBERON:0001474!1.57e-20!86;UBERON:0002405!1.99e-17!115;UBERON:0004765!7.29e-16!101;UBERON:0001434!7.29e-16!101;UBERON:0000178!2.48e-10!15;UBERON:0000179!2.48e-10!15;UBERON:0000463!2.48e-10!15;UBERON:0007023!6.79e-10!115;UBERON:0003081!6.49e-09!216;UBERON:0002384!1.34e-08!375;UBERON:0002204!1.24e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.44e-22;15!UBERON:0000179;1.44e-22;15!UBERON:0000463;1.44e-22;15!UBERON:0002390;6.03e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.25e-32,98;UBERON:0003061,4.25e-32,98;UBERON:0002193,9.25e-31,108;UBERON:0000178,1.12e-22,15;UBERON:0000179,1.12e-22,15;UBERON:0000463,1.12e-22,15;UBERON:0002371,3.83e-19,76;UBERON:0001474,2.10e-17,82;UBERON:0002405,1.69e-16,93;UBERON:0004765,1.92e-15,90;UBERON:0001434,1.96e-13,100;UBERON:0003081,5.16e-12,203;UBERON:0000926,3.84e-08,315;UBERON:0004120,3.84e-08,315;UBERON:0006603,3.84e-08,315;UBERON:0002204,5.98e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0,0,0.223915474239924,0.971680998056939,0.515151135268373,2.32637182047304,0.377875943688809,1.4555043671269,1.16214518452842,0.822335776043652,0.929119112685311,1.1507695692886,0.256160706529101,0.709446689665756,2.06847408441971,0.645484683583826,1.35426486594342,1.12945403725563,0.272906150057846,0.674170453335254,0.918251677112708,2.24650318953266,1.91801137739712,0,0,0.426224750532694,0,0,1.24564449799115,1.00499466102697,0.521482918420201,0.217188844705117,0,0.736555271975129,0,0.422510572623884,0,0.419317291016752,0.786300418025466,1.20141514273205,0.803627933485401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.411202997999018,0.334372990781356,0.977766799900771,0.473447805734733,0,1.6711568532776,0.294605907474837,0,0,0.512365278902701,0.260118695119756,0.164437904603676,0,0,0.444859689486181,1.33770414044857,0,0.339928028092699,0.383220493601921,0,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0.127986611154418,2.49861453104692,0.710331756132051,0,0,0.267440195783507,0.434473211648397,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.458426764241994,0,0,2.27183175558278,2.61194605948901,1.19662164466979,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5424333948851,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25572744982203,0.640672166455702,0,0.600182192168805,0.618315175430633,0,0,0.168776332241266,0,1.00973509697646,0.644349290496095,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,1.63802985597466,0.743155811443641,0,0,0,0,0,0,10.3459279958148,1.84901711427775,0.414656231081544,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,11.2351053592077,5.9832291840805,14.5045429702612,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,2.81487570442467,0.855877976067841,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,1.31178950409327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,5.58192370155386,1.52927441428475,3.41788312304498,3.33524485640905,2.05681136543097,2.59389324477087,1.62009431171434,3.17250070517708,0,0,0,0,0,0,0,0,1.53204296105893,0.846694330895531,0.649243880549111,0,0,0.156679895773023,0,0.677167111206413,0.1605880751037,0,0,0.687010689511529,0,0.671028323677248,0.500547425135725,0.19538809540204,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,2.3948309234694,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0.335643173951685,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.539209063845416,0,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,1.1248694577575,0.77380195455795,0.425246896606173,0,0.157611414598396,0.629455057619977,0,0,0,0.714695326373367,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0.213574825135389,0.628817220398664,0,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.530067437837643,0,0,0,0,0,0.138258436151731,0.389720617678777,0.664324201566815,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0.192687675289379,0,0.319267718114302,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.202612753855184,0,0,0.126831620387814,0,0,0,0,0,0,0.336283722218824,0,0,0.177404740325278,0,0,0.339848664884159,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.437119121007915,0,0,0,0,0,0,0,0.375935671919414,0.45120521581504,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0.26940821205835,0.143444410785353,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | |||
|short_description=p6@CASS4 | |||
}} |
Latest revision as of 03:06, 17 September 2015
Short description: | p6@CASS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CASS4_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 52bp_to_ENST00000360314, NM_001164116, uc002xxp.2_5end |
EntrezGene: | CASS4 |
HGNC: | 15878 |
UniProt: | Q9NQ75B4DII4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.25e-32 | 98 |
blood island | 4.25e-32 | 98 |
hemolymphoid system | 9.25e-31 | 108 |
blood | 1.12e-22 | 15 |
haemolymphatic fluid | 1.12e-22 | 15 |
organism substance | 1.12e-22 | 15 |
bone marrow | 3.83e-19 | 76 |
bone element | 2.10e-17 | 82 |
immune system | 1.69e-16 | 93 |
skeletal element | 1.92e-15 | 90 |
skeletal system | 1.96e-13 | 100 |
lateral plate mesoderm | 5.16e-12 | 203 |
mesoderm | 3.84e-08 | 315 |
mesoderm-derived structure | 3.84e-08 | 315 |
presumptive mesoderm | 3.84e-08 | 315 |
musculoskeletal system | 5.98e-08 | 167 |