FFCP PHASE1:Hg19::chr3:185882750..185882753,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1608 | |EntrezGene=1608 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2853 | |HGNC=2853 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_ENST00000447054_5end | |association_with_transcript=2bp_to_ENST00000447054_5end | ||
|cluster_id=chr3:185882750..185882753,- | |||
|description=CAGE_peak_9_at_DGKG_5end | |description=CAGE_peak_9_at_DGKG_5end | ||
|id=chr3:185882750..185882753,- | |id=chr3:185882750..185882753,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0002771;2.74e-50;2!UBERON:0000200;7.67e-18;6!UBERON:0002037;9.07e-18;6!UBERON:0001871;1.65e-15;6!UBERON:0002680;2.45e-12;9!UBERON:0001895;2.45e-12;9!UBERON:0004733;1.33e-09;12!UBERON:0002028;1.33e-09;12!UBERON:0000955;1.59e-09;68!UBERON:0004732;5.70e-09;13!UBERON:0000073;8.27e-08;53!UBERON:0002616;8.27e-08;53 | |ontology_enrichment_development_v019=UBERON:0006215;5.96e-34;3 | ||
|ontology_enrichment_disease=DOID:1287!9.41e-08!4;DOID:114!1.09e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.37e-14!57;UBERON:0005068!2.37e-14!57;UBERON:0006241!2.37e-14!57;UBERON:0007135!2.37e-14!57;UBERON:0000200!1.36e-12!6;UBERON:0001950!2.09e-12!20;UBERON:0002616!4.12e-12!59;UBERON:0002346!5.06e-12!90;UBERON:0003075!1.41e-11!86;UBERON:0007284!1.41e-11!86;UBERON:0007023!1.42e-11!115;UBERON:0001893!1.69e-11!34;UBERON:0005743!3.13e-11!86;UBERON:0002619!3.72e-11!22;UBERON:0000955!8.18e-11!69;UBERON:0006238!8.18e-11!69;UBERON:0001017!8.22e-11!82;UBERON:0002780!8.52e-11!41;UBERON:0001890!8.52e-11!41;UBERON:0006240!8.52e-11!41;UBERON:0000073!8.69e-11!94;UBERON:0001016!8.69e-11!94;UBERON:0003080!1.79e-10!42;UBERON:0002771!3.63e-10!3;UBERON:0002791!4.52e-10!33;UBERON:0001871!9.48e-10!7;UBERON:0000956!1.20e-09!25;UBERON:0000203!1.20e-09!25;UBERON:0001869!9.29e-09!32;UBERON:0002020!3.81e-08!34;UBERON:0003528!3.81e-08!34;UBERON:0000153!1.61e-07!129;UBERON:0007811!1.61e-07!129;UBERON:0003056!2.17e-07!61;UBERON:0000033!2.96e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;2.74e-50;2!UBERON:0000200;7.67e-18;6!UBERON:0002037;9.07e-18;6!UBERON:0001871;1.65e-15;6!UBERON:0002680;2.45e-12;9!UBERON:0001895;2.45e-12;9!UBERON:0004733;1.33e-09;12!UBERON:0002028;1.33e-09;12!UBERON:0000955;1.59e-09;68!UBERON:0004732;5.70e-09;13!UBERON:0000073;8.27e-08;53!UBERON:0002616;8.27e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,2.74e-50,2;UBERON:0000200,7.67e-18,6;UBERON:0002037,9.07e-18,6;UBERON:0006215,9.07e-18,6;UBERON:0001871,1.65e-15,6;UBERON:0002680,2.45e-12,9;UBERON:0001895,2.45e-12,9;UBERON:0010092,2.45e-12,9;UBERON:0004733,1.33e-09,12;UBERON:0002028,1.33e-09,12;UBERON:0007277,1.33e-09,12;UBERON:0004732,5.70e-09,13;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0003076,5.93e-08,15;UBERON:0003057,5.93e-08,15;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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| ||
|short_description=p9@DGKG | |short_description=p9@DGKG | ||
}} | }} |
Latest revision as of 04:32, 17 September 2015
Short description: | p9@DGKG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_DGKG_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000447054_5end |
EntrezGene: | DGKG |
HGNC: | 2853 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 2.74e-50 | 2 |
gyrus | 7.67e-18 | 6 |
cerebellum | 9.07e-18 | 6 |
rhombic lip | 9.07e-18 | 6 |
temporal lobe | 1.65e-15 | 6 |
regional part of metencephalon | 2.45e-12 | 9 |
metencephalon | 2.45e-12 | 9 |
future metencephalon | 2.45e-12 | 9 |
segmental subdivision of hindbrain | 1.33e-09 | 12 |
hindbrain | 1.33e-09 | 12 |
presumptive hindbrain | 1.33e-09 | 12 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
posterior neural tube | 5.93e-08 | 15 |
chordal neural plate | 5.93e-08 | 15 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |