FFCP PHASE1:Hg19::chr20:57089878..57089902,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=164284 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26892 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NCL9 | |||
|association_with_transcript=46bp_to_NM_153360,uc002xze.1,uc010zzp.1_5end | |||
|cluster_id=chr20:57089878..57089902,- | |||
|coexpression_cluster_id=C4054 | |||
|description=CAGE_peak_4_at_APCDD1L_5end | |||
|id=chr20:57089878..57089902,- | |||
|ontology_enrichment_celltype=CL:0000055!2.75e-34!180;CL:0000057!1.96e-16!75;CL:0000183!3.15e-14!59;CL:0000680!5.10e-14!57;CL:0000056!5.10e-14!57;CL:0000355!5.10e-14!57;CL:0000187!2.03e-12!54;CL:0000393!1.48e-11!60;CL:0000211!1.48e-11!60;CL:0002620!1.41e-10!23;CL:0000192!9.13e-10!42;CL:0000514!9.13e-10!42;CL:0000034!1.61e-09!444;CL:0000048!2.47e-09!430;CL:0000723!1.03e-08!436;CL:0000359!2.37e-08!32;CL:0002371!6.21e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0002569;1.71e-10;6!CL:0002540;9.73e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,2.17e-10,6;CL:0000680,6.71e-09,58;CL:0000056,6.71e-09,58;CL:0000355,6.71e-09,58;CL:0000048,1.36e-08,427;CL:0000187,2.35e-08,55;CL:0000723,2.90e-08,433;CL:0000034,7.68e-08,441;CL:0000192,1.13e-07,43;CL:0000514,1.13e-07,43;CL:0000393,3.79e-07,61;CL:0000211,3.79e-07,61;CL:0000359,7.96e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.48e-15!83;UBERON:0002329!2.48e-15!83;UBERON:0003077!2.48e-15!83;UBERON:0003059!2.48e-15!83;UBERON:0007282!2.48e-15!83;UBERON:0009618!2.48e-15!83;UBERON:0007285!2.48e-15!83;UBERON:0004290!8.13e-15!70;UBERON:0002385!1.71e-13!63;UBERON:0001015!1.71e-13!63;UBERON:0000383!1.71e-13!63;UBERON:0001134!2.67e-13!61;UBERON:0002036!2.67e-13!61;UBERON:0003082!2.67e-13!61;UBERON:0000486!9.93e-13!82;UBERON:0005256!4.83e-12!143;UBERON:0004573!5.25e-08!33;UBERON:0004571!5.25e-08!33;UBERON:0003914!1.18e-07!118;UBERON:0004872!1.37e-07!84;UBERON:0001637!3.03e-07!42;UBERON:0003509!3.03e-07!42;UBERON:0004572!3.03e-07!42;UBERON:0002049!4.06e-07!79;UBERON:0007798!4.06e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0003422;1.71e-10;6!UBERON:0003104;6.26e-09;7!UBERON:0009142;6.26e-09;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,2.17e-10,6;UBERON:0002385,1.01e-09,64;UBERON:0001015,1.01e-09,64;UBERON:0000383,1.01e-09,64;UBERON:0002329,1.94e-09,71;UBERON:0003059,1.94e-09,71;UBERON:0007282,1.94e-09,71;UBERON:0004290,1.94e-09,71;UBERON:0009618,1.94e-09,71;UBERON:0003077,3.10e-09,72;UBERON:0007285,3.10e-09,72;UBERON:0001134,4.42e-09,62;UBERON:0002036,4.42e-09,62;UBERON:0003082,4.42e-09,62;UBERON:0007524,4.87e-09,73;UBERON:0007503,4.89e-09,78;UBERON:0003104,1.05e-07,160;UBERON:0009142,1.05e-07,160;UBERON:0000486,2.38e-07,83 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,1.26343974685366,0,0.982935746006035,0.697801167972428,0,0,0.618831764800233,0.994192127183747,0.672325146451775,0,0.730310090387373,0,3.44738962615006,1.83600622119828,0.313454721478088,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,1.00267582127178,1.01392563272577,2.3858578411533,3.89307896242109,0,0.221729397462564,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633152558322899,0.529636723252875,0.860509862246441,0.354668382198357,0,1.06748995729705,2.71334303258876,0,2.55950276932407,0.163461903113459,0.302714855289863,0.576175924479999,0,1.5608003841516,0.570471821544449,0,0.23486899728753,0.161872944368132,0.140450806702248,0,0,0,1.18800285728205,0.989067717114227,0.910161361938026,3.59309070908119,0,0.125118519871964,0,3.07284334616587,1.5324389789951,1.65261864797256,0.226864366320042,0.89694817844431,0.213557388818567,0.423863802319124,8.40255069036326,0.618315175430633,1.8034837803194,0.558350568994769,2.36286865137773,0.487185025805993,0.504867548488229,0.276149695926898,0.323292113637624,4.26011511019937,0.403008392910561,1.18692414617341,0,0,0,0.365921118388786,0.132529768321485,0.348581828608555,0.414644220061482,0.252320850875628,1.09493207722749,0,3.21620469096443,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,1.39116485970092,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,5.17086863031111,0,0,0.26593811658487,0,1.02882949704857,5.67396528093113,2.1313774321288,0.142977993658148,2.71310802695722,2.46972101034231,0.65147236858747,0,2.37585561880029,0,0,0.299918973546171,0,0,0,0,1.14861935834114,2.85273810081437,0.434343920002738,3.49309748335652,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0.157702415033935,0,1.80567659836631,4.5481500811197,0,16.6056399633859,8.48098175291834,0,0.391602314925481,5.14715135716284,0,0,0,0,0,0.604780586659361,0.248107807818777,0.767309866440312,0.280660094433074,0.128139149255701,0,0,0,0.462629081407967,0.887808626565635,0.492762936082855,1.55776328755086,0.116210378459959,0,0,0,1.83703117063371,0,0.131124414959424,0.451199612907412,0.15403067420883,0.784349769176855,0,0,0,0,0.647747748306418,0,0.541892875087706,1.00337954770971,0,0.831076008928724,0.447749509444357,0,0,0,0.656029291399411,0.325378394664303,0,0,0,0,0,0,0.96670718292122,0.462145851343933,1.22802939780904,0.413509717453592,0.537101224341368,0,0.681813019328807,1.60257664164127,0,0,0,0,0,2.83331112147576,1.3940745403212,3.69640296211307,0,0.869932992075073,0,1.28812398067792,0,0,0.190630193923825,0,0,1.90921948755562,0.78494864019923,0,0,0.235624804691373,0.606547444719948,0,1.26377536871694,1.46290121726877,0.243713489631284,1.05650146756755,0.272999822815972,4.24216295861138,1.13008116620243,2.75682671773062,3.3171948762061,0.876901770507525,1.15755106853338,0,0,0,3.66204283291914,0.286822704408103,0.294747123039363,0,0.709522128141196,0.844430541190656,0.658589785919804,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44879151050393,0,0,0.996239941255349,0,0,0.20453736500431,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0,0,0.561111741760736,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0,2.60055530911367,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.335917362433631,1.44119953416961,0,0,0,0,0,0,0,0,0.321506296930038,0.412618309791701,0,0,0,0,0,0.236417121897595,3.82918493385486,1.90080605734932,0,0,0.714695326373367,0,15.5103807969397,0.542999601753713,0,0.653174720218818,0,0,0.681552087141687,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,8.94010114853052,0,0,0.895528817321244,0.701139929541673,0.554805861502613,1.13641803165053,0.50313580350515,0.889811221596536,0.228840068396924,0.302461847526478,2.33155800874171,0.295710299979268,0.955780602982214,0.449803112163605,1.24210365501008,0.414706207840855,3.19010057469594,1.04349012362347,1.80309130796662,0.380805212168795,0,0.363697318405119,1.71856891267982,0.928067519756987,0,0.400027764663154,1.37358282073117,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,1.01365464391844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,2.22934412268644,0,0,0,0,0.235479278551542,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,1.60342272946051,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,1.74847648403166,0,1.22574160876953,0,0,0,0,1.35941691750254,0,0,0,0,0,0,0,1.37618785021362,0,0.157771562193185,0,0,0.5290268405154,1.85997509083376,0.462175628631418,0,0.883164973845552,0,0.253397002022874,0.61193297845189,0,0,0.250707539292375,0,0,0,0,0,0.476128862927481,0,0,1.00918676322552,0.0636471582781649,0,0,0,0,0,0,0,0,15.4457825829552,0,0,0,0.813792356631477,0,0.201273793591026,0 | |||
|short_description=p4@APCDD1L | |||
}} |
Latest revision as of 05:25, 17 September 2015
Short description: | p4@APCDD1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_APCDD1L_5end |
Coexpression cluster: | C4054_Osteoblast_Fibroblast_leiomyoblastoma_meningioma_Smooth_salivary_Chondrocyte |
Association with transcript: | 46bp_to_NM_153360, uc002xze.1, uc010zzp.1_5end |
EntrezGene: | APCDD1L |
HGNC: | 26892 |
UniProt: | Q8NCL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 2.17e-10 | 6 |
muscle precursor cell | 6.71e-09 | 58 |
myoblast | 6.71e-09 | 58 |
multi-potent skeletal muscle stem cell | 6.71e-09 | 58 |
multi fate stem cell | 1.36e-08 | 427 |
muscle cell | 2.35e-08 | 55 |
somatic stem cell | 2.90e-08 | 433 |
stem cell | 7.68e-08 | 441 |
smooth muscle cell | 1.13e-07 | 43 |
smooth muscle myoblast | 1.13e-07 | 43 |
electrically responsive cell | 3.79e-07 | 61 |
electrically active cell | 3.79e-07 | 61 |
vascular associated smooth muscle cell | 7.96e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 2.17e-10 | 6 |
muscle tissue | 1.01e-09 | 64 |
musculature | 1.01e-09 | 64 |
musculature of body | 1.01e-09 | 64 |
somite | 1.94e-09 | 71 |
presomitic mesoderm | 1.94e-09 | 71 |
presumptive segmental plate | 1.94e-09 | 71 |
dermomyotome | 1.94e-09 | 71 |
trunk paraxial mesoderm | 1.94e-09 | 71 |
paraxial mesoderm | 3.10e-09 | 72 |
presumptive paraxial mesoderm | 3.10e-09 | 72 |
skeletal muscle tissue | 4.42e-09 | 62 |
striated muscle tissue | 4.42e-09 | 62 |
myotome | 4.42e-09 | 62 |
dense mesenchyme tissue | 4.87e-09 | 73 |
epithelial vesicle | 4.89e-09 | 78 |
mesenchyme | 1.05e-07 | 160 |
entire embryonic mesenchyme | 1.05e-07 | 160 |
multilaminar epithelium | 2.38e-07 | 83 |