FFCP PHASE1:Hg19::chr20:57090389..57090412,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:57090389..57090412,-
|short_description=p3@APCDD1L
|description=CAGE_peak_3_at_APCDD1L_5end
|association_with_transcript=-202bp_to_ENST00000425773_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=164284 | |EntrezGene=164284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26892 | |HGNC=26892 | ||
|TSSclassifier=strong | |||
|UniProt=A2A2P3 | |UniProt=A2A2P3 | ||
|association_with_transcript=-202bp_to_ENST00000425773_5end | |||
|cluster_id=chr20:57090389..57090412,- | |||
|coexpression_cluster_id=C2622 | |||
|description=CAGE_peak_3_at_APCDD1L_5end | |||
|id=chr20:57090389..57090412,- | |||
|ontology_enrichment_celltype=CL:0000055!2.81e-29!180;CL:0000680!4.66e-17!57;CL:0000056!4.66e-17!57;CL:0000355!4.66e-17!57;CL:0000359!1.59e-16!32;CL:0000192!3.45e-16!42;CL:0000514!3.45e-16!42;CL:0000187!4.03e-15!54;CL:0000183!2.00e-14!59;CL:0000057!1.03e-13!75;CL:0000034!1.57e-13!444;CL:0000723!2.27e-13!436;CL:0000393!5.04e-13!60;CL:0000211!5.04e-13!60;CL:0000048!5.13e-13!430;CL:0002371!1.16e-11!591;CL:0002620!2.19e-10!23;CL:0000144!2.62e-10!625;CL:0002539!7.84e-09!10;CL:0000548!8.28e-08!679;CL:0000004!8.28e-08!679;CL:0000255!8.28e-08!679;CL:0000012!1.58e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.10e-12;32!CL:0002539;5.38e-09;10!CL:0002620;1.17e-08;23!CL:0000134;2.30e-08;55!CL:0000499;2.74e-08;28!CL:0000048;1.24e-07;58!CL:0000723;2.01e-07;61!CL:0002595;3.59e-07;5!CL:0000135;4.07e-07;3!CL:0000388;4.07e-07;3!CL:0000192;5.08e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.46e-15,427;CL:0000057,1.90e-15,76;CL:0000723,4.75e-15,433;CL:0000034,2.18e-14,441;CL:0000359,1.63e-12,32;CL:0000192,1.67e-09,43;CL:0000514,1.67e-09,43;CL:0002539,5.17e-09,10;CL:0000680,8.73e-09,58;CL:0000056,8.73e-09,58;CL:0000355,8.73e-09,58;CL:0002620,1.03e-08,23;CL:0000134,1.18e-08,354;CL:0000499,2.42e-08,28;CL:0002320,3.47e-08,361;CL:0000187,1.91e-07,55;CL:0000135,3.86e-07,3;CL:0000388,3.86e-07,3;CL:0000219,4.83e-07,386;CL:0002595,4.96e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;5.08e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!9.93e-11!14;DOID:120!9.05e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.45e-15;14!DOID:120;6.94e-10;27!DOID:193;5.49e-09;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.00e-15,14;DOID:120,7.06e-10,27;DOID:193,5.58e-09,29 | |||
|ontology_enrichment_uberon=UBERON:0000486!4.75e-22!82;UBERON:0000914!5.15e-22!83;UBERON:0002329!5.15e-22!83;UBERON:0003077!5.15e-22!83;UBERON:0003059!5.15e-22!83;UBERON:0007282!5.15e-22!83;UBERON:0009618!5.15e-22!83;UBERON:0007285!5.15e-22!83;UBERON:0004290!1.10e-20!70;UBERON:0001134!3.98e-17!61;UBERON:0002036!3.98e-17!61;UBERON:0003082!3.98e-17!61;UBERON:0002385!7.64e-17!63;UBERON:0001015!7.64e-17!63;UBERON:0000383!7.64e-17!63;UBERON:0004573!1.10e-13!33;UBERON:0004571!1.10e-13!33;UBERON:0005256!1.22e-12!143;UBERON:0001637!1.45e-12!42;UBERON:0003509!1.45e-12!42;UBERON:0004572!1.45e-12!42;UBERON:0002100!7.79e-09!216;UBERON:0004237!7.84e-09!10;UBERON:0004695!7.84e-09!10;UBERON:0002111!7.84e-09!10;UBERON:0004178!7.84e-09!10;UBERON:0001135!1.05e-08!15;UBERON:0001981!1.34e-08!60;UBERON:0007500!1.34e-08!60;UBERON:0004537!1.34e-08!60;UBERON:0006965!1.34e-08!60;UBERON:0003102!1.85e-08!95;UBERON:0002199!2.02e-08!45;UBERON:0002416!2.02e-08!45;UBERON:0002204!8.30e-08!167;UBERON:0002097!1.09e-07!40;UBERON:0004872!3.11e-07!84;UBERON:0000947!5.59e-07!21;UBERON:0010191!5.59e-07!21;UBERON:0000055!6.00e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.35e-12;33!UBERON:0004571;1.35e-12;33!UBERON:0002118;5.13e-10;5!UBERON:0004237;5.38e-09;10!UBERON:0004695;5.38e-09;10!UBERON:0002111;5.38e-09;10!UBERON:0004178;5.38e-09;10!UBERON:0000992;1.56e-08;13!UBERON:0001637;3.36e-07;42!UBERON:0003509;3.36e-07;42!UBERON:0004572;3.36e-07;42!UBERON:0003834;3.59e-07;5!UBERON:0001533;3.59e-07;5!UBERON:0007846;4.07e-07;3!UBERON:0000043;4.07e-07;3!UBERON:0007845;4.07e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,2.54e-13,33;UBERON:0004571,2.54e-13,33;UBERON:0001637,5.39e-11,42;UBERON:0003509,5.39e-11,42;UBERON:0004572,5.39e-11,42;UBERON:0002329,5.94e-10,71;UBERON:0003059,5.94e-10,71;UBERON:0007282,5.94e-10,71;UBERON:0004290,5.94e-10,71;UBERON:0009618,5.94e-10,71;UBERON:0003077,9.94e-10,72;UBERON:0007285,9.94e-10,72;UBERON:0002118,1.04e-09,5;UBERON:0000486,1.51e-09,83;UBERON:0007524,1.64e-09,73;UBERON:0004237,5.17e-09,10;UBERON:0004695,5.17e-09,10;UBERON:0002111,5.17e-09,10;UBERON:0004178,5.17e-09,10;UBERON:0001134,8.34e-09,62;UBERON:0002036,8.34e-09,62;UBERON:0003082,8.34e-09,62;UBERON:0007503,1.62e-08,78;UBERON:0000992,1.88e-08,13;UBERON:0002385,2.28e-08,64;UBERON:0001015,2.28e-08,64;UBERON:0000383,2.28e-08,64;UBERON:0002384,1.48e-07,371;UBERON:0007846,3.86e-07,3;UBERON:0000043,3.86e-07,3;UBERON:0007845,3.86e-07,3;UBERON:0003834,4.96e-07,5;UBERON:0001533,4.96e-07,5 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,1.34465029290355,1.20538905604795,0.730310090387373,0.487932798790507,0.738726348460727,0.408001382488506,0,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0.56738522469114,0.622822248995575,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0,2.02785126545153,2.3858578411533,6.32625331393427,0,0,0,0.0654895377488563,0,0.741568885568859,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,1.13967460498122,0.794455084879313,0.573673241497627,1.41867352879343,0,1.06748995729705,1.97334038733728,0,1.34710672069688,0,0,0,0,2.49728061464256,0,0.298897361103602,0.117434498643765,0.323745888736263,0.140450806702248,0,0,0,0,0.989067717114227,0,2.87447256726495,0,0.250237039743928,0,1.31693286264251,0.30648779579902,2.55404700141215,0,3.7671823494661,0,0.847727604638247,6.60200411385685,1.33968288009971,1.28820270022815,0.930584281657949,6.75105328965065,2.24105111870757,1.26216887122057,0.368199594569197,0.161646056818812,4.9701342952326,1.91428986632517,1.52604533079439,0.386521706326594,0,0.286804595389004,0,0,0.116193942869518,0.414644220061482,0.504641701751257,0,1.56449532329816,0.643240938192885,2.76269842704961,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.100528972411631,0.277765335475589,0,0,0,1.15930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,1.00789276919316,0,0.179117045405697,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,2.71470603091333,0,1.690605505112,0.531876233169741,0,0.771622122786426,1.41849132023278,2.1313774321288,0,0,0.823240336780769,0.977208552881205,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0.239624855491583,0,1.42636905040718,1.15825045334063,2.87666851570537,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.542530047399471,0,0,0.157702415033935,0,2.10662269809403,0,0,3.98535359121262,6.63729006750131,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,1.38115775959256,3.08726103876381,0.256278298511402,0,1.44768529029247,0,0.925258162815933,1.77561725313127,1.56041596426237,3.11552657510173,0.348631135379878,0,0.200506470303285,0,2.29628896329214,0.182091168006717,0.262248829918848,0,0.308061348417659,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0.290012154876366,0,0,0.137836572484531,0.107420244868274,0,0.426133137080504,0.445160178233687,0.165284915360978,0,0,0,2.32422774648643,5.03699754929024,2.0911118104818,1.54016790088044,0.532306030317022,1.73986598415015,0.55597265731176,1.00187420719394,0,0,0.571890581771475,0,0,2.54562598340749,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,4.75530963519025,2.10629228119491,0,1.21856744815642,3.16950440270266,0.409499734223957,1.97967604735198,0,2.2054613741845,3.3171948762061,0.876901770507525,0.578775534266688,0,0.202910376962704,0.30982349809975,3.66204283291914,0.573645408816206,0.294747123039363,0.35667105148125,0,2.74439925886963,0.658589785919804,0,0,0,0,0,0,0.86101074534246,3.36942951335251,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0,0.614321404198464,0,0,1.11308705022906,0,0,0.398495976502139,0,0,0.511343412510774,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,4.24841747333129,0,0,0,0,0,0,0.124252535565433,0,0,0,0.305994652908965,2.31160471921215,0,0,0,0,0,0.558564802544508,0,0,0.199679000498991,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.157611414598396,0.681909645754975,1.37280437475228,0,0.191915197319445,0,0,1.27134268827375,3.25799761052228,0,1.63293680054705,0,0,0.340776043570843,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,11.9985568046068,0,0,2.98509605773748,1.8697064787778,0,2.84104507912634,0.50313580350515,0,0.686520205190771,0.907385542579434,2.17612080815893,1.33069634990671,1.75226443880073,2.24901556081802,1.39736661188633,0.829412415681711,8.24109315129784,2.08698024724694,1.6528336989694,0.761610424337591,2.03435366602331,1.27294061441792,4.29642228169954,1.39210127963548,1.19428766609585,0,2.74716564146234,1.34699795506368,0,0,0,0,0,0.231522474323834,0,0,0.617602894321944,0,0,0,1.18259708457151,0,0,0.607719912354764,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0.7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| ||
|short_description=p3@APCDD1L | |||
}} | }} |
Latest revision as of 05:30, 17 September 2015
Short description: | p3@APCDD1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_APCDD1L_5end |
Coexpression cluster: | C2622_Osteoblast_Chondrocyte_meningioma_Fibroblast_mesenchymal_Smooth_tenocyte |
Association with transcript: | -202bp_to_ENST00000425773_5end |
EntrezGene: | APCDD1L |
HGNC: | 26892 |
UniProt: | A2A2P3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.46e-15 | 427 |
fibroblast | 1.90e-15 | 76 |
somatic stem cell | 4.75e-15 | 433 |
stem cell | 2.18e-14 | 441 |
vascular associated smooth muscle cell | 1.63e-12 | 32 |
smooth muscle cell | 1.67e-09 | 43 |
smooth muscle myoblast | 1.67e-09 | 43 |
aortic smooth muscle cell | 5.17e-09 | 10 |
muscle precursor cell | 8.73e-09 | 58 |
myoblast | 8.73e-09 | 58 |
multi-potent skeletal muscle stem cell | 8.73e-09 | 58 |
skin fibroblast | 1.03e-08 | 23 |
mesenchymal cell | 1.18e-08 | 354 |
stromal cell | 2.42e-08 | 28 |
connective tissue cell | 3.47e-08 | 361 |
muscle cell | 1.91e-07 | 55 |
fibrocyte | 3.86e-07 | 3 |
tendon cell | 3.86e-07 | 3 |
motile cell | 4.83e-07 | 386 |
smooth muscle cell of the subclavian artery | 4.96e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 2.54e-13 | 33 |
systemic arterial system | 2.54e-13 | 33 |
artery | 5.39e-11 | 42 |
arterial blood vessel | 5.39e-11 | 42 |
arterial system | 5.39e-11 | 42 |
somite | 5.94e-10 | 71 |
presomitic mesoderm | 5.94e-10 | 71 |
presumptive segmental plate | 5.94e-10 | 71 |
dermomyotome | 5.94e-10 | 71 |
trunk paraxial mesoderm | 5.94e-10 | 71 |
paraxial mesoderm | 9.94e-10 | 72 |
presumptive paraxial mesoderm | 9.94e-10 | 72 |
right ovary | 1.04e-09 | 5 |
multilaminar epithelium | 1.51e-09 | 83 |
dense mesenchyme tissue | 1.64e-09 | 73 |
blood vessel smooth muscle | 5.17e-09 | 10 |
arterial system smooth muscle | 5.17e-09 | 10 |
artery smooth muscle tissue | 5.17e-09 | 10 |
aorta smooth muscle tissue | 5.17e-09 | 10 |
skeletal muscle tissue | 8.34e-09 | 62 |
striated muscle tissue | 8.34e-09 | 62 |
myotome | 8.34e-09 | 62 |
epithelial vesicle | 1.62e-08 | 78 |
female gonad | 1.88e-08 | 13 |
muscle tissue | 2.28e-08 | 64 |
musculature | 2.28e-08 | 64 |
musculature of body | 2.28e-08 | 64 |
connective tissue | 1.48e-07 | 371 |
dense regular connective tissue | 3.86e-07 | 3 |
tendon | 3.86e-07 | 3 |
regular connective tissue | 3.86e-07 | 3 |
thoracic segment blood vessel | 4.96e-07 | 5 |
subclavian artery | 4.96e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.00e-15 | 14 |
female reproductive organ cancer | 7.06e-10 | 27 |
reproductive organ cancer | 5.58e-09 | 29 |